MGE detailed information
MGE type: Prophage MGE length: 98130 bp
Accession: NZ_LR134079 Location: 2505277..2603406 Organism: Escherichia coli strain NCTC9112 Replicon: chromosome
Accession: NZ_LR134079 Location: 2505277..2603406 Organism: Escherichia coli strain NCTC9112 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL053_RS12495 () | 2501176..2502396 | + | 1221 | WP_023154520.1 | DNA-binding transcriptional repressor Mlc | - |
| EL053_RS12500 () | 2502521..2503216 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| EL053_RS12505 () | 2503169..2504461 | - | 1293 | WP_071789969.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EL053_RS12510 () | 2504620..2505234 | - | 615 | WP_000148698.1 | Tat proofreading chaperone DmsD | - |
| EL053_RS12515 () | 2505277..2506131 | - | 855 | WP_000526477.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EL053_RS12520 () | 2506133..2506675 | - | 543 | Protein_2411 | dimethylsulfoxide reductase subunit B | - |
| EL053_RS12525 () | 2506725..2507888 | - | 1164 | WP_001387389.1 | hypothetical protein ; Integrase | Integrase |
| EL053_RS12535 () | 2508150..2508401 | - | 252 | WP_000497817.1 | DUF4222 domain-containing protein | - |
| EL053_RS12540 () | 2508449..2509129 | - | 681 | WP_021571295.1 | YqaJ viral recombinase family protein | - |
| EL053_RS12545 () | 2509126..2509911 | - | 786 | WP_000100829.1 | phage recombination protein Bet | - |
| EL053_RS12550 () | 2509917..2510213 | - | 297 | WP_000995032.1 | host-nuclease inhibitor Gam family protein | - |
| EL053_RS12555 () | 2510210..2512282 | - | 2073 | WP_021571294.1 | hypothetical protein | - |
| EL053_RS12560 () | 2512390..2512776 | - | 387 | WP_016238038.1 | hypothetical protein | - |
| EL053_RS12565 () | 2512860..2513081 | - | 222 | WP_000560214.1 | cell division protein FtsZ | - |
| EL053_RS12570 () | 2513538..2513747 | + | 210 | WP_000189938.1 | hypothetical protein | - |
| EL053_RS12575 () | 2513716..2514075 | - | 360 | WP_001005964.1 | hypothetical protein | - |
| EL053_RS12580 () | 2514107..2514292 | - | 186 | WP_001140061.1 | hypothetical protein | - |
| EL053_RS12590 () | 2514503..2514808 | - | 306 | WP_000256291.1 | hypothetical protein | - |
| EL053_RS12595 () | 2515142..2515363 | + | 222 | WP_000502040.1 | hypothetical protein | - |
| EL053_RS12600 () | 2515516..2516223 | - | 708 | WP_001369130.1 | helix-turn-helix transcriptional regulator | - |
| EL053_RS12605 () | 2516334..2516558 | + | 225 | WP_001054988.1 | helix-turn-helix domain-containing protein | - |
| EL053_RS12610 () | 2516675..2516971 | + | 297 | WP_000084293.1 | hypothetical protein | - |
| EL053_RS12615 () | 2516986..2517204 | + | 219 | WP_000438870.1 | hypothetical protein | - |
| EL053_RS12620 () | 2517225..2518313 | + | 1089 | WP_021571293.1 | hypothetical protein | - |
| EL053_RS12625 () | 2518320..2519060 | + | 741 | WP_021571292.1 | ATP-binding protein | - |
| EL053_RS12630 () | 2519086..2519856 | + | 771 | WP_046623299.1 | DUF1627 domain-containing protein | - |
| EL053_RS12635 () | 2519872..2520303 | + | 432 | WP_000196185.1 | DUF977 family protein | - |
| EL053_RS12640 () | 2520336..2521010 | - | 675 | WP_032144013.1 | DUF4145 domain-containing protein | - |
| EL053_RS12645 () | 2521009..2521254 | + | 246 | WP_001624507.1 | hypothetical protein | - |
| EL053_RS12650 () | 2521309..2521617 | - | 309 | WP_000147082.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| EL053_RS12655 () | 2521607..2521936 | - | 330 | WP_016232083.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EL053_RS12660 () | 2522254..2522928 | + | 675 | WP_021571289.1 | ORF6N domain-containing protein | - |
| EL053_RS12665 () | 2522983..2523393 | + | 411 | WP_001076830.1 | recombination protein NinB | - |
| EL053_RS12670 () | 2523390..2523581 | + | 192 | WP_001254269.1 | NinE family protein | - |
| EL053_RS12675 () | 2523605..2523895 | + | 291 | WP_024194163.1 | DUF1364 domain-containing protein | - |
| EL053_RS12680 () | 2523892..2524254 | + | 363 | WP_001624518.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EL053_RS12685 () | 2524251..2524451 | + | 201 | WP_000994506.1 | protein ninH | - |
| EL053_RS12690 () | 2524444..2524686 | + | 243 | WP_001624519.1 | hypothetical protein | - |
| EL053_RS12695 () | 2524686..2525300 | + | 615 | WP_001241329.1 | hypothetical protein | - |
| EL053_RS12700 () | 2526268..2528241 | + | 1974 | WP_042014376.1 | SASA family carbohydrate esterase | - |
| EL053_RS12705 () | 2528382..2528576 | + | 195 | WP_024192660.1 | DUF1378 family protein | - |
| EL053_RS12710 () | 2528602..2528892 | + | 291 | WP_000129681.1 | DUF826 domain-containing protein | - |
| EL053_RS12715 () | 2528969..2529184 | + | 216 | WP_024194161.1 | class II holin family protein | - |
| EL053_RS12720 () | 2529189..2529722 | + | 534 | WP_016232222.1 | lysozyme | - |
| EL053_RS12730 () | 2529879..2530061 | + | 183 | WP_021566721.1 | hypothetical protein | - |
| EL053_RS12735 () | 2530076..2530207 | + | 132 | WP_001280930.1 | hypothetical protein | - |
| EL053_RS12740 () | 2530215..2530682 | + | 468 | WP_001824833.1 | lysis protein | - |
| EL053_RS12745 () | 2530984..2531832 | + | 849 | WP_114493865.1 | terminase | - |
| EL053_RS12750 () | 2531816..2533522 | + | 1707 | WP_126502591.1 | terminase | - |
| EL053_RS12755 () | 2533522..2535666 | + | 2145 | WP_021565202.1 | hypothetical protein | - |
| EL053_RS12760 () | 2535823..2536830 | + | 1008 | WP_021577513.1 | hypothetical protein | - |
| EL053_RS12765 () | 2536853..2538067 | + | 1215 | WP_001539091.1 | N4-gp56 family major capsid protein | - |
| EL053_RS12770 () | 2538122..2538514 | + | 393 | WP_001140438.1 | hypothetical protein | - |
| EL053_RS12775 () | 2538565..2539026 | + | 462 | WP_016232486.1 | hypothetical protein | - |
| EL053_RS12780 () | 2539010..2539573 | + | 564 | WP_016232075.1 | hypothetical protein | - |
| EL053_RS12785 () | 2539573..2540223 | + | 651 | WP_000207910.1 | hypothetical protein | - |
| EL053_RS12790 () | 2540220..2541779 | + | 1560 | Protein_2462 | ISNCY family transposase KIS | Transposase |
| EL053_RS12795 () | 2542109..2542702 | + | 594 | WP_097747195.1 | DUF4376 domain-containing protein | - |
| EL053_RS12800 () | 2543499..2544779 | + | 1281 | WP_126502592.1 | hypothetical protein | VF |
| EL053_RS12805 () | 2544868..2545338 | + | 471 | WP_021565060.1 | hypothetical protein | - |
| EL053_RS12810 () | 2545338..2545520 | + | 183 | WP_000279725.1 | hypothetical protein | - |
| EL053_RS12815 () | 2545702..2547327 | + | 1626 | WP_097747140.1 | hypothetical protein | - |
| EL053_RS12820 () | 2547324..2548591 | + | 1268 | Protein_2468 | DUF1983 domain-containing protein | - |
| EL053_RS12825 () | 2548606..2548887 | + | 282 | WP_000852820.1 | hypothetical protein | - |
| EL053_RS12830 () | 2548893..2549510 | + | 618 | WP_024185469.1 | hypothetical protein | - |
| EL053_RS12835 () | 2549590..2550327 | + | 738 | WP_001539074.1 | GTP cyclohydrolase FolE2 | VF |
| EL053_RS12840 () | 2550560..2550700 | + | 141 | WP_000078907.1 | Hok/Gef family protein | - |
| EL053_RS12845 () | 2550757..2551158 | + | 402 | WP_000035556.1 | hypothetical protein | - |
| EL053_RS12850 () | 2551252..2551908 | + | 657 | WP_016232066.1 | hypothetical protein | - |
| EL053_RS12855 () | 2551911..2552357 | + | 447 | WP_016232704.1 | hypothetical protein | - |
| EL053_RS12860 () | 2552367..2552618 | + | 252 | WP_000540391.1 | bacteriocin | - |
| EL053_RS12865 () | 2552629..2553891 | + | 1263 | WP_016232703.1 | hypothetical protein | - |
| EL053_RS12870 () | 2553976..2562345 | + | 8370 | WP_087895084.1 | hypothetical protein | - |
| EL053_RS12875 () | 2562532..2563020 | + | 489 | WP_050490189.1 | SocA family protein | - |
| EL053_RS12880 () | 2563109..2563753 | - | 645 | WP_126502593.1 | ParB N-terminal domain-containing protein | - |
| EL053_RS12885 () | 2563738..2564964 | - | 1227 | WP_001145450.1 | phosphoadenosine phosphosulfate reductase | - |
| EL053_RS12890 () | 2565161..2565790 | - | 630 | WP_032218632.1 | antA/AntB antirepressor family protein | - |
| EL053_RS12895 () | 2566040..2566324 | - | 285 | WP_021577504.1 | antA/AntB antirepressor family protein | - |
| EL053_RS12905 () | 2566749..2566853 | - | 105 | Protein_2484 | 4Fe-4S binding protein | - |
| EL053_RS12910 () | 2566864..2569287 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| EL053_RS12915 () | 2569348..2571774 | - | 2427 | WP_023154523.1 | dimethyl sulfoxide reductase subunit A | - |
| EL053_RS12920 () | 2571973..2572278 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| EL053_RS12925 () | 2572386..2573096 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL053_RS12930 () | 2573099..2573659 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| EL053_RS12935 () | 2573694..2574035 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| EL053_RS12940 () | 2574170..2574520 | + | 351 | WP_000598291.1 | YnfA family protein | - |
| EL053_RS12945 () | 2574701..2575915 | + | 1215 | WP_024257740.1 | starvation-sensing protein RspA | - |
| EL053_RS12950 () | 2575927..2576244 | + | 318 | Protein_2493 | alcohol dehydrogenase catalytic domain-containing protein | - |
| EL053_RS12955 () | 2576260..2576957 | - | 698 | Protein_2494 | IS1 family transposase | - |
| EL053_RS12960 () | 2577024..2577812 | + | 789 | WP_001614533.1 | ParB/Srx family N-terminal domain-containing protein | - |
| EL053_RS12965 () | 2577805..2578737 | + | 933 | WP_001614535.1 | hypothetical protein | - |
| EL053_RS12970 () | 2578673..2578924 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| EL053_RS12975 () | 2578928..2580022 | + | 1095 | WP_024240905.1 | terminase small subunit | - |
| EL053_RS12980 () | 2580003..2581304 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| EL053_RS12985 () | 2581307..2582713 | + | 1407 | WP_000763701.1 | DUF4055 domain-containing protein | - |
| EL053_RS12990 () | 2582697..2583809 | + | 1113 | WP_096215917.1 | hypothetical protein | - |
| EL053_RS12995 () | 2583914..2584678 | + | 765 | WP_000770040.1 | hypothetical protein | - |
| EL053_RS13000 () | 2584777..2585916 | + | 1140 | WP_001526967.1 | hypothetical protein | - |
| EL053_RS27285 () | 2585959..2586135 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| EL053_RS13005 () | 2586139..2586534 | + | 396 | WP_000634210.1 | hypothetical protein | - |
| EL053_RS13010 () | 2586534..2586917 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| EL053_RS13015 () | 2586918..2587298 | + | 381 | WP_096215915.1 | hypothetical protein | - |
| EL053_RS13020 () | 2587295..2587687 | + | 393 | WP_096215914.1 | electron transfer flavoprotein subunit beta | - |
| EL053_RS13025 () | 2587714..2588676 | + | 963 | WP_052924055.1 | hypothetical protein | - |
| EL053_RS13030 () | 2588827..2589186 | + | 360 | WP_122997133.1 | hypothetical protein | - |
| EL053_RS13040 () | 2589658..2592890 | + | 3233 | Protein_2511 | phage tail tape measure protein | - |
| EL053_RS13045 () | 2592883..2593221 | + | 339 | WP_000024053.1 | phage tail protein | - |
| EL053_RS13050 () | 2593221..2593919 | + | 699 | WP_021540947.1 | phage minor tail protein L | - |
| EL053_RS13055 () | 2593925..2594668 | + | 744 | WP_097292699.1 | C40 family peptidase | - |
| EL053_RS13060 () | 2594566..2595213 | + | 648 | WP_074511506.1 | tail assembly protein | - |
| EL053_RS13065 () | 2595274..2598687 | + | 3414 | WP_126502594.1 | host specificity protein J | - |
| EL053_RS13070 () | 2598757..2599356 | + | 600 | WP_112014603.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| EL053_RS13075 () | 2599421..2602822 | + | 3402 | WP_126502595.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EL053_RS13080 () | 2602822..2603406 | + | 585 | WP_096216083.1 | tail fiber assembly protein | - |
| EL053_RS13085 () | 2603619..2604476 | - | 858 | WP_000968131.1 | iron/manganese ABC transporter permease subunit SitD | - |
| EL053_RS13090 () | 2604473..2605330 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| EL053_RS13095 () | 2605327..2606154 | - | 828 | WP_000983721.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| EL053_RS13100 () | 2606154..2607068 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| EL053_RS13105 () | 2607653..2608087 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|