MGE detailed information
MGE type: Genomic_island MGE length: 16546 bp
Accession: NZ_LR134075 Location: 3939692..3956237 Organism: Escherichia coli strain NCTC9084 Replicon: chromosome
Accession: NZ_LR134075 Location: 3939692..3956237 Organism: Escherichia coli strain NCTC9084 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL019_RS19225 () | 3936223..3936948 | - | 726 | WP_001572545.1 | type 1 fimbria chaperone FimC | - |
| EL019_RS19230 () | 3936985..3937524 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| EL019_RS19235 () | 3937589..3938137 | - | 549 | WP_001572544.1 | type 1 fimbrial major subunit FimA | - |
| EL019_RS19240 () | 3938618..3939214 | - | 597 | WP_000044700.1 | type 1 fimbria switch DNA invertase FimE | - |
| EL019_RS19245 () | 3939692..3940294 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| EL019_RS19255 () | 3941751..3942467 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| EL019_RS19260 () | 3942487..3943593 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| EL019_RS19265 () | 3943658..3944638 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| EL019_RS19270 () | 3945221..3946461 | - | 1241 | Protein_3732 | helicase YjhR | - |
| EL019_RS19275 () | 3946577..3946822 | + | 246 | Protein_3733 | GNAT family N-acetyltransferase | - |
| EL019_RS19280 () | 3947199..3947456 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| EL019_RS19285 () | 3947468..3948013 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| EL019_RS19290 () | 3948069..3948815 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| EL019_RS19295 () | 3948984..3949202 | + | 219 | Protein_3737 | hypothetical protein | - |
| EL019_RS22550 () | 3949240..3949356 | + | 117 | Protein_3738 | VOC family protein | - |
| EL019_RS19300 () | 3949601..3950722 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| EL019_RS19305 () | 3950719..3950997 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| EL019_RS19310 () | 3951009..3952322 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| EL019_RS19315 () | 3952335..3953141 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| EL019_RS19320 () | 3953272..3953703 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| EL019_RS19325 () | 3953715..3954347 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| EL019_RS19330 () | 3954364..3955146 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| EL019_RS19335 () | 3955449..3956237 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| EL019_RS19340 () | 3956242..3957147 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| EL019_RS19345 () | 3957158..3959125 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| EL019_RS19350 () | 3959232..3960581 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|