MGE detailed information
MGE type: Prophage MGE length: 43370 bp
Accession: NZ_LR134075 Location: 2206908..2250277 Organism: Escherichia coli strain NCTC9084 Replicon: chromosome
Accession: NZ_LR134075 Location: 2206908..2250277 Organism: Escherichia coli strain NCTC9084 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL019_RS10735 () | 2202807..2204027 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| EL019_RS10740 () | 2204152..2204847 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| EL019_RS10745 () | 2204800..2206092 | - | 1293 | WP_071594606.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EL019_RS10750 () | 2206251..2206865 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| EL019_RS10755 () | 2206908..2207762 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EL019_RS10760 () | 2207764..2208381 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| EL019_RS10765 () | 2208392..2210815 | - | 2424 | WP_126297579.1 | dimethyl sulfoxide reductase subunit A | - |
| EL019_RS10770 () | 2210876..2213302 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| EL019_RS10775 () | 2213501..2213806 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EL019_RS10780 () | 2213914..2214624 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL019_RS10785 () | 2214627..2215187 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EL019_RS10790 () | 2215222..2215563 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EL019_RS10795 () | 2215698..2216024 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| EL019_RS10800 () | 2216230..2217444 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EL019_RS10805 () | 2217456..2218475 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EL019_RS10815 () | 2218663..2219943 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EL019_RS10820 () | 2219978..2220229 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EL019_RS10825 () | 2220302..2221909 | - | 1608 | Protein_2090 | 3'-5' exoribonuclease | - |
| EL019_RS10830 () | 2221972..2222229 | + | 258 | Protein_2091 | IS3 family transposase ISSfl10 | Transposase |
| EL019_RS10840 () | 2222296..2223447 | + | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| EL019_RS10845 () | 2223454..2224350 | + | 897 | Protein_2093 | IS3 family transposase ISSd1 | Transposase |
| EL019_RS10850 () | 2224393..2224773 | - | 381 | Protein_2094 | hypothetical protein | - |
| EL019_RS10855 () | 2224763..2225014 | + | 252 | Protein_2095 | DUF977 family protein | - |
| EL019_RS10860 () | 2225011..2225367 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| EL019_RS22505 () | 2225978..2226265 | + | 288 | Protein_2097 | hypothetical protein | - |
| EL019_RS10875 () | 2227034..2228347 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL019_RS10880 () | 2228784..2229116 | - | 333 | WP_001301033.1 | protein FlxA | - |
| EL019_RS10885 () | 2229319..2229624 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| EL019_RS10890 () | 2229649..2229888 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL019_RS10895 () | 2229888..2230175 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL019_RS10900 () | 2230247..2230402 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL019_RS10905 () | 2230619..2230870 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| EL019_RS10910 () | 2230937..2231215 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| EL019_RS10915 () | 2231217..2232176 | + | 960 | Protein_2106 | HNH endonuclease | - |
| EL019_RS22510 () | 2232177..2232269 | + | 93 | Protein_2107 | antitermination protein | - |
| EL019_RS10920 () | 2232547..2232636 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| EL019_RS10925 () | 2232691..2232903 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EL019_RS10930 () | 2233204..2233419 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EL019_RS22630 () | 2233783..2233953 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EL019_RS10935 () | 2234173..2234388 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EL019_RS10940 () | 2234393..2234704 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| EL019_RS10945 () | 2234701..2235234 | + | 534 | WP_001092971.1 | lysozyme | - |
| EL019_RS10950 () | 2235231..2235728 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EL019_RS10955 () | 2236092..2236304 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EL019_RS10960 () | 2236315..2236503 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| EL019_RS10965 () | 2236506..2236571 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| EL019_RS10970 () | 2236651..2236806 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| EL019_RS10975 () | 2236978..2237151 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EL019_RS10980 () | 2237303..2237713 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EL019_RS10985 () | 2237771..2238004 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EL019_RS10990 () | 2238393..2238938 | + | 546 | WP_000453589.1 | DNA-packaging protein | - |
| EL019_RS10995 () | 2238896..2239222 | + | 327 | Protein_2124 | phage tail protein | - |
| EL019_RS11000 () | 2239189..2239497 | + | 309 | WP_071524888.1 | phage tail protein | - |
| EL019_RS11005 () | 2239497..2240072 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| EL019_RS11010 () | 2240170..2240760 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL019_RS11015 () | 2241077..2241310 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL019_RS11020 () | 2241379..2241492 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| EL019_RS11025 () | 2242013..2243380 | + | 1368 | Protein_2130 | MHS family MFS transporter | - |
| EL019_RS11030 () | 2243469..2244929 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| EL019_RS11035 () | 2244964..2245167 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EL019_RS11040 () | 2245344..2246030 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EL019_RS11045 () | 2246119..2246865 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| EL019_RS11050 () | 2247002..2249047 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| EL019_RS11055 () | 2249091..2249609 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| EL019_RS11060 () | 2249885..2250277 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| EL019_RS11065 () | 2250532..2251422 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| EL019_RS22635 () | 2251537..2251641 | - | 105 | WP_211180496.1 | protein MgtT | - |
| EL019_RS11070 () | 2251641..2251736 | - | 96 | WP_000901367.1 | protein MgtS | - |
| EL019_RS11075 () | 2251863..2253050 | - | 1188 | WP_126297544.1 | efflux MFS transporter YdeE | - |
| EL019_RS11080 () | 2253245..2254144 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| EL019_RS11085 () | 2254175..2254393 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| EL019_RS11090 () | 2254425..2254808 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| EL019_RS11095 () | 2254828..2255262 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|