MGE detailed information
MGE type: Prophage MGE length: 36974 bp
Accession: NZ_LR134000 Location: 2237958..2274931 Organism: Escherichia coli strain NCTC9066 Replicon: chromosome
Accession: NZ_LR134000 Location: 2237958..2274931 Organism: Escherichia coli strain NCTC9066 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL014_RS10900 () | 2233857..2235077 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| EL014_RS10905 () | 2235202..2235897 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| EL014_RS10910 () | 2235850..2237142 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EL014_RS10915 () | 2237301..2237915 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| EL014_RS10920 () | 2237958..2238812 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EL014_RS10925 () | 2238814..2239431 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| EL014_RS10930 () | 2239442..2241865 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| EL014_RS10935 () | 2241926..2244352 | - | 2427 | WP_000041681.1 | dimethyl sulfoxide reductase subunit A | - |
| EL014_RS10940 () | 2244551..2244856 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EL014_RS10945 () | 2244964..2245674 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL014_RS10950 () | 2245677..2246237 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EL014_RS10955 () | 2246272..2246613 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EL014_RS10960 () | 2246748..2247074 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| EL014_RS10965 () | 2247280..2248494 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EL014_RS10970 () | 2248506..2249525 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EL014_RS10980 () | 2249713..2250993 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EL014_RS10985 () | 2251028..2251279 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EL014_RS10990 () | 2251352..2252416 | - | 1065 | Protein_2123 | 3'-5' exoribonuclease | - |
| EL014_RS10995 () | 2252416..2252658 | + | 243 | Protein_2124 | DUF977 family protein | - |
| EL014_RS11000 () | 2252655..2253011 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| EL014_RS22710 () | 2253622..2253909 | + | 288 | Protein_2126 | hypothetical protein | - |
| EL014_RS11015 () | 2254678..2255991 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL014_RS11020 () | 2256453..2256785 | - | 333 | WP_001301033.1 | protein FlxA | - |
| EL014_RS11025 () | 2256988..2257293 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| EL014_RS11030 () | 2257318..2257557 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL014_RS11035 () | 2257557..2257844 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL014_RS11040 () | 2257916..2258071 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL014_RS11045 () | 2258288..2258539 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| EL014_RS11050 () | 2258606..2258884 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| EL014_RS11055 () | 2258886..2259935 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EL014_RS11060 () | 2259949..2260701 | + | 753 | WP_001047135.1 | antitermination protein | - |
| EL014_RS11065 () | 2260979..2261068 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| EL014_RS11070 () | 2261123..2261335 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EL014_RS11075 () | 2261636..2261851 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EL014_RS22850 () | 2262215..2262385 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EL014_RS11080 () | 2262605..2262820 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EL014_RS11085 () | 2262825..2263136 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| EL014_RS11090 () | 2263133..2263666 | + | 534 | WP_001092971.1 | lysozyme | - |
| EL014_RS11095 () | 2263663..2264160 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EL014_RS11100 () | 2264523..2264735 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EL014_RS11105 () | 2264746..2264934 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| EL014_RS11110 () | 2264937..2265002 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| EL014_RS11115 () | 2265082..2265237 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| EL014_RS11120 () | 2265409..2265582 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EL014_RS11125 () | 2265734..2266144 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EL014_RS11130 () | 2266202..2266435 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EL014_RS22715 () | 2266519..2269113 | + | 2595 | WP_074478589.1 | phage portal protein | - |
| EL014_RS11140 () | 2269074..2271059 | + | 1986 | WP_054626213.1 | tail fiber protein | - |
| EL014_RS11145 () | 2271059..2271634 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| EL014_RS11150 () | 2271732..2272322 | - | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL014_RS11155 () | 2272639..2272872 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL014_RS11160 () | 2272941..2273054 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| EL014_RS11165 () | 2273648..2274931 | + | 1284 | Protein_2158 | MHS family MFS transporter YdfJ | - |
| EL014_RS11170 () | 2275020..2276480 | + | 1461 | WP_000527806.1 | mannitol dehydrogenase family protein | - |
| EL014_RS11175 () | 2276516..2276719 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EL014_RS11180 () | 2276896..2277582 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EL014_RS11185 () | 2277671..2278417 | - | 747 | WP_001324973.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|