MGE detailed information
MGE type: Prophage MGE length: 96309 bp
Accession: NZ_LR130555 Location: 4613895..4710203 Organism: Escherichia coli strain MS14385 isolate MS14385 Replicon: chromosome
Accession: NZ_LR130555 Location: 4613895..4710203 Organism: Escherichia coli strain MS14385 isolate MS14385 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW040_RS27700 () | 4609908..4610327 | - | 420 | WP_001062122.1 | hypothetical protein | - |
| EW040_RS22615 () | 4610320..4612353 | - | 2034 | WP_000807722.1 | hypothetical protein | - |
| EW040_RS22620 () | 4612370..4613908 | - | 1539 | WP_001333349.1 | hypothetical protein | - |
| EW040_RS22625 () | 4613895..4615142 | - | 1248 | WP_000414651.1 | hypothetical protein ; Integrase | Integrase |
| EW040_RS22630 () | 4615301..4615837 | - | 537 | WP_000168305.1 | single-stranded DNA-binding protein SSB1 | - |
| EW040_RS22635 () | 4616092..4618914 | + | 2823 | WP_000357740.1 | excinuclease ABC subunit UvrA | - |
| EW040_RS22640 () | 4618949..4619305 | - | 357 | WP_000155657.1 | MmcQ/YjbR family DNA-binding protein | - |
| EW040_RS22645 () | 4619309..4619725 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| EW040_RS22650 () | 4619836..4620549 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| EW040_RS22655 () | 4620950..4621453 | + | 504 | WP_001027697.1 | hypothetical protein | - |
| EW040_RS22665 () | 4621676..4622869 | - | 1194 | WP_022646434.1 | aromatic amino acid transaminase | - |
| EW040_RS22670 () | 4623122..4624201 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| EW040_RS22675 () | 4624254..4625669 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| EW040_RS22680 () | 4625752..4626735 | + | 984 | WP_022646433.1 | hypothetical protein | VF |
| EW040_RS22685 () | 4626901..4627143 | - | 243 | WP_000891408.1 | envelope stress response protein PspG | - |
| EW040_RS22690 () | 4627277..4628314 | - | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| EW040_RS22695 () | 4628403..4629500 | + | 1098 | WP_000332264.1 | hypothetical protein ; Integrase | Integrase |
| EW040_RS22700 () | 4629562..4629810 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| EW040_RS22705 () | 4630053..4631222 | + | 1170 | WP_157915790.1 | acyltransferase | - |
| EW040_RS22710 () | 4631234..4631833 | - | 600 | WP_069904755.1 | tail fiber assembly protein | - |
| EW040_RS22715 () | 4631833..4632537 | - | 705 | WP_089438600.1 | phage tail protein | - |
| EW040_RS22720 () | 4632541..4633125 | - | 585 | WP_000383548.1 | YmfQ family protein | - |
| EW040_RS22725 () | 4633116..4634174 | - | 1059 | WP_089438601.1 | baseplate J/gp47 family protein | - |
| EW040_RS22730 () | 4634161..4634586 | - | 426 | WP_000424747.1 | phage GP46 family protein | - |
| EW040_RS22735 () | 4634586..4635134 | - | 549 | WP_001259084.1 | phage baseplate assembly protein V | - |
| EW040_RS22740 () | 4635134..4636213 | - | 1080 | WP_000999518.1 | baseplate protein | - |
| EW040_RS22745 () | 4636210..4637538 | - | 1329 | WP_128767295.1 | DNA circularization N-terminal domain-containing protein | - |
| EW040_RS22750 () | 4637599..4639434 | - | 1836 | WP_089438603.1 | phage tail tape measure protein | - |
| EW040_RS22760 () | 4639576..4639845 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| EW040_RS22765 () | 4639845..4640201 | - | 357 | WP_000090997.1 | phage tail tube protein | - |
| EW040_RS22770 () | 4640201..4641697 | - | 1497 | WP_000155710.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| EW040_RS22775 () | 4641681..4641851 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| EW040_RS22780 () | 4641860..4642420 | - | 561 | WP_000779292.1 | hypothetical protein | - |
| EW040_RS22785 () | 4642417..4642923 | - | 507 | WP_073461653.1 | hypothetical protein | - |
| EW040_RS22790 () | 4642898..4643308 | - | 411 | WP_089438605.1 | phage head closure protein | - |
| EW040_RS22795 () | 4643305..4643628 | - | 324 | WP_000924829.1 | head-tail connector protein | - |
| EW040_RS22800 () | 4643707..4644936 | - | 1230 | WP_000766100.1 | phage major capsid protein | - |
| EW040_RS22805 () | 4644947..4645549 | - | 603 | WP_000999805.1 | HK97 family phage prohead protease | - |
| EW040_RS22810 () | 4645542..4646768 | - | 1227 | WP_089438606.1 | phage portal protein | - |
| EW040_RS27585 () | 4646758..4646919 | - | 162 | WP_000838374.1 | hypothetical protein | - |
| EW040_RS22815 () | 4646916..4648412 | - | 1497 | WP_124939318.1 | terminase large subunit | - |
| EW040_RS22820 () | 4648663..4649148 | - | 486 | WP_000929174.1 | phage terminase small subunit P27 family | - |
| EW040_RS22825 () | 4649274..4649624 | - | 351 | WP_001135093.1 | HNH endonuclease | - |
| EW040_RS22835 () | 4649848..4650000 | - | 153 | WP_001139680.1 | hypothetical protein | - |
| EW040_RS22840 () | 4649988..4650455 | - | 468 | WP_001393971.1 | lysis protein | - |
| EW040_RS22845 () | 4650452..4650928 | - | 477 | WP_001393970.1 | glycoside hydrolase family protein | - |
| EW040_RS22850 () | 4650932..4651273 | - | 342 | WP_000781785.1 | phage holin, lambda family | - |
| EW040_RS22855 () | 4651405..4651647 | - | 243 | WP_089438607.1 | hypothetical protein | - |
| EW040_RS22860 () | 4651936..4652688 | - | 753 | WP_015967852.1 | antitermination protein | - |
| EW040_RS22865 () | 4652702..4653691 | - | 990 | WP_032176009.1 | DUF968 domain-containing protein | - |
| EW040_RS22870 () | 4653699..4654508 | - | 810 | WP_001061438.1 | KilA-N domain-containing protein | - |
| EW040_RS22875 () | 4654528..4654917 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EW040_RS22880 () | 4654914..4655240 | - | 327 | WP_021513308.1 | LexA repressor | - |
| EW040_RS22885 () | 4655237..4655890 | - | 654 | WP_001343335.1 | phage N-6-adenine-methyltransferase | - |
| EW040_RS22890 () | 4655890..4656384 | - | 495 | WP_072178178.1 | PerC family transcriptional regulator | - |
| EW040_RS27590 () | 4656381..4657373 | - | 993 | WP_016241752.1 | hypothetical protein | - |
| EW040_RS22900 () | 4657330..4657542 | - | 213 | WP_089438608.1 | DUF4222 domain-containing protein | - |
| EW040_RS22905 () | 4657718..4658302 | - | 585 | WP_000514174.1 | hypothetical protein | - |
| EW040_RS22910 () | 4658330..4658527 | - | 198 | WP_001231956.1 | Cro/Cl family transcriptional regulator | - |
| EW040_RS22915 () | 4658623..4659276 | + | 654 | WP_000981537.1 | helix-turn-helix domain-containing protein | - |
| EW040_RS22925 () | 4659703..4659948 | - | 246 | WP_000141753.1 | hypothetical protein | - |
| EW040_RS22930 () | 4660061..4660371 | + | 311 | Protein_4419 | hypothetical protein | - |
| EW040_RS22935 () | 4660386..4660748 | + | 363 | WP_000135682.1 | hypothetical protein | - |
| EW040_RS22940 () | 4660814..4661638 | + | 825 | WP_089438609.1 | DUF2303 family protein | - |
| EW040_RS22945 () | 4661766..4662302 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| EW040_RS22950 () | 4662293..4662655 | + | 363 | WP_001565177.1 | phage protein | - |
| EW040_RS22955 () | 4662655..4663464 | + | 810 | WP_000206745.1 | hypothetical protein | - |
| EW040_RS22960 () | 4663464..4664036 | + | 573 | WP_001061348.1 | 3'-5' exoribonuclease | - |
| EW040_RS22965 () | 4664073..4664354 | + | 282 | WP_001093917.1 | pyocin activator PrtN family protein | - |
| EW040_RS27595 () | 4664402..4664575 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| EW040_RS22970 () | 4664615..4665001 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| EW040_RS22975 () | 4665031..4665603 | - | 573 | WP_000458584.1 | SocA family protein | Antitoxin Detail |
| EW040_RS22980 () | 4665839..4665961 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| EW040_RS22985 () | 4666323..4667327 | - | 1005 | WP_022646425.1 | DUF2713 family protein | - |
| EW040_RS22990 () | 4667645..4668160 | + | 516 | WP_000416263.1 | zinc uptake transcriptional repressor Zur | - |
| EW040_RS22995 () | 4668202..4668411 | - | 210 | WP_001296638.1 | CsbD family protein | - |
| EW040_RS23000 () | 4668527..4669852 | - | 1326 | WP_001361471.1 | MATE family efflux transporter DinF | - |
| EW040_RS23005 () | 4669925..4670533 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| EW040_RS23010 () | 4670643..4671011 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| EW040_RS23015 () | 4671182..4673605 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| EW040_RS23020 () | 4673760..4674632 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| EW040_RS23025 () | 4674645..4675142 | - | 498 | WP_001308201.1 | chorismate lyase | - |
| EW040_RS23030 () | 4675365..4676945 | - | 1581 | WP_022646424.1 | hypothetical protein | VF |
| EW040_RS23035 () | 4677173..4678093 | - | 921 | WP_000783444.1 | maltose operon protein MalM | - |
| EW040_RS23040 () | 4678336..4679676 | - | 1341 | WP_000973665.1 | maltoporin LamB | - |
| EW040_RS23045 () | 4679748..4680863 | - | 1116 | WP_000179165.1 | hypothetical protein | VF |
| EW040_RS23050 () | 4681228..4682418 | + | 1191 | WP_000695389.1 | maltose/maltodextrin ABC transporter substrate-binding protein MalE | - |
| EW040_RS23055 () | 4682572..4684116 | + | 1545 | WP_022646423.1 | maltose ABC transporter permease MalF | - |
| EW040_RS23060 () | 4684131..4685021 | + | 891 | WP_001252058.1 | maltose ABC transporter permease MalG | - |
| EW040_RS23065 () | 4685115..4685525 | - | 411 | WP_000202902.1 | phosphate-starvation-inducible protein PsiE | - |
| EW040_RS23070 () | 4685739..4686017 | + | 279 | WP_001295279.1 | periplasmic protein | - |
| EW040_RS23075 () | 4686064..4688160 | - | 2097 | WP_022646422.1 | YjbH domain-containing protein | - |
| EW040_RS23080 () | 4688160..4688897 | - | 738 | WP_022646421.1 | capsule biosynthesis GfcC family protein | - |
| EW040_RS23085 () | 4688894..4689532 | - | 639 | WP_001296632.1 | YjbF family lipoprotein | - |
| EW040_RS23090 () | 4689646..4689888 | - | 243 | WP_000757333.1 | polysaccharide production threonine-rich protein | - |
| EW040_RS23095 () | 4690243..4691892 | - | 1650 | WP_022646420.1 | glucose-6-phosphate isomerase | - |
| EW040_RS23105 () | 4692417..4693766 | + | 1350 | WP_022646419.1 | lysine-sensitive aspartokinase 3 | - |
| EW040_RS23110 () | 4693821..4694168 | - | 348 | WP_000619864.1 | DNA-binding protein | - |
| EW040_RS23115 () | 4694706..4694993 | + | 288 | WP_022646418.1 | putative holin | - |
| EW040_RS23120 () | 4694996..4695601 | + | 606 | WP_000266448.1 | lytic transglycosylase domain-containing protein | - |
| EW040_RS23125 () | 4695614..4695928 | + | 315 | WP_000777272.1 | membrane protein | - |
| EW040_RS23130 () | 4696073..4696528 | + | 456 | WP_022646417.1 | hypothetical protein | - |
| EW040_RS23135 () | 4696525..4696722 | + | 198 | WP_000875310.1 | hypothetical protein | - |
| EW040_RS23140 () | 4696712..4698136 | + | 1425 | WP_022646416.1 | phage tail sheath family protein | - |
| EW040_RS23145 () | 4698136..4698660 | + | 525 | WP_000907502.1 | phage major tail tube protein | - |
| EW040_RS23150 () | 4698711..4699028 | + | 318 | WP_022646415.1 | phage tail assembly protein | - |
| EW040_RS23155 () | 4698988..4699116 | + | 129 | WP_015674804.1 | GpE family phage tail protein | - |
| EW040_RS23160 () | 4699218..4701593 | + | 2376 | WP_022646414.1 | hypothetical protein | - |
| EW040_RS23165 () | 4701593..4702546 | + | 954 | WP_022646413.1 | phage tail protein | - |
| EW040_RS23170 () | 4702546..4702755 | + | 210 | WP_001269711.1 | tail protein X | - |
| EW040_RS23175 () | 4702743..4703783 | + | 1041 | WP_022646412.1 | phage late control D family protein | - |
| EW040_RS23180 () | 4703793..4704494 | + | 702 | WP_000679403.1 | phage baseplate assembly protein V | - |
| EW040_RS23185 () | 4704593..4704952 | + | 360 | WP_022646411.1 | GPW/gp25 family protein | - |
| EW040_RS23190 () | 4704943..4705920 | + | 978 | WP_038432214.1 | baseplate J/gp47 family protein | - |
| EW040_RS23195 () | 4705913..4706629 | + | 717 | WP_022646409.1 | phage tail protein I | - |
| EW040_RS23200 () | 4706632..4708242 | + | 1611 | WP_022646408.1 | phage tail protein | - |
| EW040_RS23205 () | 4708239..4708946 | + | 708 | WP_022646407.1 | DUF4376 domain-containing protein | - |
| EW040_RS23210 () | 4708943..4709398 | + | 456 | WP_022646406.1 | hypothetical protein | - |
| EW040_RS23215 () | 4709412..4710203 | - | 792 | WP_022646405.1 | nucleotidyltransferase domain-containing protein | - |
| EW040_RS23220 () | 4710209..4711336 | - | 1128 | WP_022646404.1 | slipin family protein | - |
| EW040_RS23225 () | 4711865..4712137 | + | 273 | WP_001207638.1 | DUF3811 domain-containing protein | - |
| EW040_RS23230 () | 4712138..4713010 | - | 873 | WP_022646403.1 | 23S rRNA pseudouridine(2604) synthase RluF | - |
| EW040_RS23235 () | 4713358..4714305 | + | 948 | WP_000431660.1 | sugar-binding transcriptional regulator | - |
| EW040_RS23240 () | 4714375..4715181 | + | 807 | WP_001195407.1 | SDR family oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|