MGE detailed information
MGE type: Genomic_island MGE length: 25143 bp
Accession: NZ_LR027557 Location: 1902293..1927435 Organism: Pseudomonas synxantha strain 10586 Replicon: chromosome
Accession: NZ_LR027557 Location: 1902293..1927435 Organism: Pseudomonas synxantha strain 10586 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KR485_RS08205 | 1897347..1897520 | + | 174 | WP_164365968.1 | hypothetical protein | - |
| KR485_RS08210 | 1897501..1897779 | + | 279 | WP_032880171.1 | hypothetical protein | - |
| KR485_RS08215 | 1897818..1899317 | - | 1500 | WP_078821903.1 | PLP-dependent aminotransferase family protein | - |
| KR485_RS08220 | 1899413..1900660 | + | 1248 | WP_216091854.1 | benzoate/H(+) symporter BenE family transporter | - |
| KR485_RS08225 | 1901174..1901398 | - | 225 | WP_216092182.1 | tyrosine-type recombinase/integrase | - |
| KR485_RS28315 | 1902612..1903766 | - | 1155 | WP_248130066.1 | PAAR domain-containing protein | - |
| KR485_RS08240 | 1903883..1904275 | - | 393 | WP_248130065.1 | hypothetical protein | - |
| KR485_RS08245 | 1905139..1905480 | - | 342 | WP_248132367.1 | polymorphic toxin type 44 domain-containing protein | - |
| KR485_RS08250 | 1905912..1906172 | - | 261 | WP_216091856.1 | hypothetical protein | - |
| KR485_RS08255 | 1906477..1907304 | - | 828 | Protein_1639 | IS91 family transposase ISWz1 | Transposase |
| KR485_RS08260 | 1907356..1908690 | - | 1335 | WP_216091857.1 | TolC family outer membrane protein | - |
| KR485_RS08265 | 1908693..1910015 | - | 1323 | WP_216091858.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| KR485_RS08270 | 1910012..1911760 | - | 1749 | WP_248130013.1 | type I secretion system permease/ATPase | - |
| KR485_RS08275 | 1912035..1913462 | - | 1428 | WP_216091859.1 | hypothetical protein | - |
| KR485_RS08280 | 1913860..1914087 | + | 228 | WP_216091860.1 | hypothetical protein | - |
| KR485_RS08285 | 1914133..1914336 | - | 204 | WP_216091861.1 | hypothetical protein | - |
| KR485_RS08290 | 1914327..1914572 | + | 246 | WP_216091862.1 | hypothetical protein | - |
| KR485_RS28320 | 1914682..1914965 | - | 284 | Protein_1647 | hypothetical protein ; Integrase | Integrase |
| KR485_RS08295 | 1915277..1916941 | + | 1665 | WP_216091863.1 | colicin-like pore-forming protein | - |
| KR485_RS08300 | 1917019..1917579 | + | 561 | WP_216091864.1 | hypothetical protein | - |
| KR485_RS08305 | 1917790..1918749 | - | 960 | WP_216091865.1 | IS91 family transposase ISWz1 | Transposase |
| KR485_RS08310 | 1918734..1919294 | - | 561 | WP_248130019.1 | N-acetyltransferase | - |
| KR485_RS08315 | 1919612..1919953 | - | 342 | WP_216091866.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KR485_RS08320 | 1919967..1920215 | - | 249 | WP_216091867.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KR485_RS08325 | 1920417..1920749 | - | 333 | WP_216091868.1 | stability/partitioning determinant | - |
| KR485_RS08330 | 1921089..1921421 | + | 333 | WP_216091869.1 | hypothetical protein | - |
| KR485_RS08335 | 1921440..1921682 | + | 243 | WP_216091870.1 | hypothetical protein | - |
| KR485_RS08340 | 1921784..1922131 | + | 348 | WP_197880951.1 | hypothetical protein | - |
| KR485_RS08345 | 1922223..1922552 | + | 330 | WP_216091871.1 | hypothetical protein | - |
| KR485_RS08350 | 1922569..1922775 | + | 207 | WP_216091872.1 | hypothetical protein | - |
| KR485_RS08355 | 1922792..1923394 | + | 603 | WP_216091873.1 | hypothetical protein | - |
| KR485_RS08360 | 1923667..1923822 | + | 156 | WP_197880954.1 | hypothetical protein | - |
| KR485_RS08365 | 1923922..1924221 | + | 300 | Protein_1662 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| KR485_RS08370 | 1924636..1924887 | + | 252 | Protein_1663 | hypothetical protein | VF |
| KR485_RS08375 | 1924878..1925073 | + | 196 | Protein_1664 | single-stranded-DNA-specific exonuclease RecJ | - |
| KR485_RS28325 | 1925376..1925732 | + | 357 | WP_253201693.1 | IS3 family transposase ISAs33 | Transposase |
| KR485_RS08380 | 1925707..1926513 | + | 807 | WP_253201699.1 | IS3 family transposase ISSlo2 | Transposase |
| KR485_RS08385 | 1926620..1927435 | - | 816 | WP_248129898.1 | ParA family protein | - |
| KR485_RS08395 | 1927693..1928589 | - | 897 | WP_032880168.1 | LysR family transcriptional regulator | - |
| KR485_RS08400 | 1928690..1929826 | + | 1137 | WP_194438814.1 | FMN-dependent L-lactate dehydrogenase LldD | - |
| KR485_RS08405 | 1930234..1931160 | + | 927 | WP_005789880.1 | GGDEF domain-containing protein | - |
| KR485_RS08410 | 1931182..1931994 | - | 813 | WP_032880165.1 | iron-containing redox enzyme family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|