MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 31016 bp
Accession: NZ_LR025103 Location: 1..31016 Organism: Escherichia coli isolate EC-1639 Replicon: plasmid 4
Accession: NZ_LR025103 Location: 1..31016 Organism: Escherichia coli isolate EC-1639 Replicon: plasmid 4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC1639_RS25070 () | 212..481 | + | 270 | WP_001086090.1 | hypothetical protein | - |
| EC1639_RS25075 () | 537..788 | + | 252 | WP_021526207.1 | hypothetical protein | - |
| EC1639_RS25085 () | 1309..1563 | + | 255 | WP_024190254.1 | hypothetical protein | - |
| EC1639_RS25090 () | 1698..2225 | - | 528 | WP_021526204.1 | DUF2726 domain-containing protein | - |
| EC1639_RS25095 () | 2380..2784 | - | 405 | WP_063270189.1 | hypothetical protein | - |
| EC1639_RS25100 () | 2797..3639 | - | 843 | WP_047090419.1 | replication initiation protein | - |
| EC1639_RS25115 () | 5364..5879 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| EC1639_RS25120 () | 5984..6526 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| EC1639_RS25125 () | 6523..6774 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| EC1639_RS25130 () | 6761..6988 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| EC1639_RS25135 () | 7083..7435 | + | 353 | Protein_11 | molecular chaperone DnaJ | - |
| EC1639_RS25140 () | 7437..7709 | + | 273 | WP_001272373.1 | hypothetical protein | - |
| EC1639_RS25145 () | 7777..8082 | + | 306 | WP_072182957.1 | hypothetical protein | - |
| EC1639_RS25150 () | 8388..8636 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| EC1639_RS25155 () | 8633..8980 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| EC1639_RS25165 () | 9341..9841 | + | 501 | WP_063270188.1 | hypothetical protein | - |
| EC1639_RS25170 () | 9853..11082 | + | 1230 | WP_001694183.1 | hypothetical protein | Relaxase |
| EC1639_RS25175 () | 11159..11425 | + | 267 | WP_000160396.1 | hypothetical protein | - |
| EC1639_RS25180 () | 11430..11663 | + | 234 | WP_134051832.1 | EexN family lipoprotein | - |
| EC1639_RS25185 () | 12027..12647 | + | 621 | WP_001694184.1 | Type IV secretion system protein virB1 | VF |
| EC1639_RS25190 () | 12715..12987 | + | 273 | WP_032143906.1 | Type IV secretion system protein virB2 | VF |
| EC1639_RS25195 () | 13006..15753 | + | 2748 | WP_001694186.1 | Type IV secretion system protein virB4 | VF |
| EC1639_RS25200 () | 15765..16481 | + | 717 | WP_021526218.1 | hypothetical protein | - |
| EC1639_RS25205 () | 16492..17571 | + | 1080 | WP_000007791.1 | hypothetical protein | VF |
| EC1639_RS25225 () | 18086..18772 | + | 687 | WP_001694188.1 | Type IV secretion system protein virB8 | VF |
| EC1639_RS25230 () | 18769..19677 | + | 909 | WP_077764223.1 | Type IV secretion system protein virB9 | VF |
| EC1639_RS25235 () | 19670..20788 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| EC1639_RS25240 () | 20790..21818 | + | 1029 | WP_001401678.1 | Type IV secretion system protein VirB11 | VF |
| EC1639_RS25245 () | 21805..23667 | + | 1863 | WP_000847107.1 | type IV secretory system conjugative DNA transfer family protein | - |
| EC1639_RS25250 () | 23679..24098 | + | 420 | WP_000737410.1 | hypothetical protein | - |
| EC1639_RS25255 () | 24082..24387 | + | 306 | WP_021526217.1 | hypothetical protein | - |
| EC1639_RS25260 () | 24442..24681 | + | 240 | WP_021526216.1 | hypothetical protein | - |
| EC1639_RS25265 () | 24784..25092 | + | 309 | WP_021526215.1 | hypothetical protein | - |
| EC1639_RS25270 () | 25089..25580 | + | 492 | WP_021526214.1 | thermonuclease family protein | - |
| EC1639_RS25275 () | 25591..25917 | + | 327 | WP_021526213.1 | hypothetical protein | - |
| EC1639_RS25285 () | 26184..26936 | + | 753 | WP_000988468.1 | hypothetical protein | - |
| EC1639_RS25290 () | 27009..27284 | + | 276 | WP_000109866.1 | hypothetical protein | - |
| EC1639_RS25295 () | 27295..27867 | + | 573 | WP_021526211.1 | hypothetical protein | - |
| EC1639_RS25300 () | 27872..30025 | + | 2154 | WP_021526210.1 | type IA DNA topoisomerase | - |
| EC1639_RS25305 () | 30022..30228 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| EC1639_RS25310 () | 30246..30710 | + | 465 | WP_001565876.1 | H-NS histone family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|