MGE detailed information
MGE type: Prophage MGE length: 47553 bp
Accession: NZ_LR025101 Location: 2356796..2404348 Organism: Escherichia coli isolate EC-1639 Replicon: chromosome
Accession: NZ_LR025101 Location: 2356796..2404348 Organism: Escherichia coli isolate EC-1639 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC1639_RS11365 () | 2352846..2353829 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| EC1639_RS11370 () | 2354307..2355680 | + | 1374 | WP_000123754.1 | ATP-dependent RNA helicase DbpA | - |
| EC1639_RS11375 () | 2355809..2356744 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| EC1639_RS11380 () | 2356796..2358031 | - | 1236 | WP_000040858.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EC1639_RS11385 () | 2358033..2358248 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| EC1639_RS11390 () | 2358327..2358536 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2358352..2358530 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2358352..2358530 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2358352..2358530 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2358352..2358530 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| EC1639_RS11395 () | 2358529..2358723 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| EC1639_RS11400 () | 2358780..2359589 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| EC1639_RS11405 () | 2359582..2362182 | - | 2601 | WP_001586992.1 | exodeoxyribonuclease VIII | - |
| EC1639_RS11410 () | 2362284..2362559 | - | 276 | WP_000632297.1 | protein RacC | - |
| EC1639_RS11415 () | 2362634..2362804 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| EC1639_RS11420 () | 2362804..2363025 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| EC1639_RS11425 () | 2363467..2363955 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| EC1639_RS11430 () | 2363952..2364107 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| EC1639_RS11435 () | 2364118..2364297 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| EC1639_RS11445 () | 2364540..2364959 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| EC1639_RS11450 () | 2365039..2365293 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| EC1639_RS11455 () | 2365290..2365712 | + | 423 | WP_000693800.1 | hypothetical protein | - |
| EC1639_RS11460 () | 2365790..2366579 | + | 790 | Protein_2178 | hypothetical protein | - |
| EC1639_RS11465 () | 2366586..2367332 | + | 747 | WP_000788982.1 | ATP-binding protein | - |
| EC1639_RS11470 () | 2367355..2368080 | + | 726 | WP_000450652.1 | DUF1627 domain-containing protein | - |
| EC1639_RS11475 () | 2368097..2368519 | + | 423 | WP_001586994.1 | DUF977 family protein | - |
| EC1639_RS11480 () | 2368680..2369198 | + | 519 | WP_001586995.1 | hypothetical protein | - |
| EC1639_RS11485 () | 2369229..2370662 | - | 1434 | WP_001586996.1 | hypothetical protein | - |
| EC1639_RS11490 () | 2370634..2371692 | - | 1059 | WP_001586997.1 | nucleoid-associated protein | - |
| EC1639_RS11495 () | 2372022..2372177 | + | 156 | WP_197731663.1 | type I toxin-antitoxin system Hok family toxin | - |
| EC1639_RS11505 () | 2372641..2373240 | + | 600 | WP_000940324.1 | DUF1367 family protein | - |
| EC1639_RS11510 () | 2373240..2373530 | + | 291 | WP_001586999.1 | DUF1364 domain-containing protein | - |
| EC1639_RS11515 () | 2373527..2374069 | + | 543 | WP_000640136.1 | DUF1133 family protein | - |
| EC1639_RS11530 () | 2375356..2375571 | + | 216 | WP_001587000.1 | phage lysis protein EssD | - |
| EC1639_RS11535 () | 2375571..2376068 | + | 498 | WP_001135296.1 | lysozyme RrrD | - |
| EC1639_RS11540 () | 2376285..2376470 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| EC1639_RS11545 () | 2376667..2378124 | + | 1458 | WP_001097893.1 | Trk system potassium transporter TrkG | - |
| EC1639_RS11550 () | 2378262..2379050 | + | 789 | WP_001291102.1 | ParB/Srx family N-terminal domain-containing protein | - |
| EC1639_RS11555 () | 2379043..2379975 | + | 933 | WP_001204032.1 | hypothetical protein | - |
| EC1639_RS11560 () | 2379911..2380162 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| EC1639_RS11565 () | 2380166..2381260 | + | 1095 | WP_000089446.1 | terminase small subunit | - |
| EC1639_RS11570 () | 2381241..2382542 | + | 1302 | WP_001587002.1 | terminase family protein | - |
| EC1639_RS11575 () | 2382545..2383951 | + | 1407 | WP_000763709.1 | DUF4055 domain-containing protein | - |
| EC1639_RS11580 () | 2383935..2385047 | + | 1113 | WP_001317036.1 | hypothetical protein | - |
| EC1639_RS11585 () | 2385152..2385916 | + | 765 | WP_000770038.1 | hypothetical protein | - |
| EC1639_RS11590 () | 2386015..2387154 | + | 1140 | WP_000918483.1 | hypothetical protein | - |
| EC1639_RS25915 () | 2387197..2387373 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| EC1639_RS11595 () | 2387377..2387772 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| EC1639_RS11600 () | 2387772..2388155 | + | 384 | WP_000524262.1 | hypothetical protein | - |
| EC1639_RS11605 () | 2388156..2388536 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| EC1639_RS11610 () | 2388533..2388925 | + | 393 | WP_000144678.1 | hypothetical protein | - |
| EC1639_RS11615 () | 2388952..2389914 | + | 963 | WP_000094292.1 | hypothetical protein | - |
| EC1639_RS11620 () | 2390065..2390424 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| EC1639_RS11630 () | 2390898..2394131 | + | 3234 | WP_001587006.1 | phage tail tape measure protein | - |
| EC1639_RS11635 () | 2394124..2394462 | + | 339 | WP_000024051.1 | phage tail protein | - |
| EC1639_RS11640 () | 2394462..2395160 | + | 699 | WP_001578255.1 | phage minor tail protein L | - |
| EC1639_RS11645 () | 2395166..2395909 | + | 744 | WP_021520058.1 | C40 family peptidase | - |
| EC1639_RS11650 () | 2395846..2396454 | + | 609 | WP_000090934.1 | tail assembly protein | - |
| EC1639_RS11655 () | 2396515..2399910 | + | 3396 | WP_001615196.1 | host specificity protein J | - |
| EC1639_RS11660 () | 2399978..2400577 | + | 600 | WP_001228247.1 | Outer membrane protein X | VF |
| EC1639_RS11665 () | 2400642..2403017 | + | 2376 | WP_078175068.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EC1639_RS11670 () | 2403017..2403298 | + | 282 | WP_000654166.1 | hypothetical protein | - |
| EC1639_RS11675 () | 2403308..2404348 | + | 1041 | WP_001326214.1 | tail fiber domain-containing protein | - |
| EC1639_RS11680 () | 2404391..2404684 | + | 294 | WP_000355602.1 | hypothetical protein | - |
| EC1639_RS11685 () | 2404704..2404823 | + | 120 | Protein_2220 | tail fiber assembly protein | - |
| EC1639_RS11695 () | 2405036..2405893 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| EC1639_RS11700 () | 2405890..2406747 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| EC1639_RS11705 () | 2406744..2407571 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| EC1639_RS11710 () | 2407571..2408485 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|