MGE detailed information
MGE type: Prophage MGE length: 121777 bp
Accession: NZ_LR025096 Location: 3776652..3898428 Organism: Escherichia coli isolate EC-7215 Replicon: chromosome
Accession: NZ_LR025096 Location: 3776652..3898428 Organism: Escherichia coli isolate EC-7215 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC7215_RS18270 () | 3772022..3773821 | - | 1800 | WP_000211897.1 | NADPH-dependent assimilatory sulfite reductase flavoprotein subunit | - |
| EC7215_RS18275 () | 3774140..3774502 | + | 363 | WP_000108294.1 | 6-carboxytetrahydropterin synthase QueD | - |
| EC7215_RS18280 () | 3774542..3775096 | + | 555 | WP_001348411.1 | carbohydrate kinase | - |
| EC7215_RS18285 () | 3776652..3777323 | - | 672 | WP_001199982.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| EC7215_RS18290 () | 3777496..3778098 | + | 603 | WP_001716880.1 | LemA family protein | - |
| EC7215_RS18295 () | 3778112..3779017 | + | 906 | WP_000793004.1 | YgcG family protein | - |
| EC7215_RS18300 () | 3779053..3779415 | + | 363 | WP_000034928.1 | hypothetical protein | - |
| EC7215_RS18305 () | 3779471..3780769 | - | 1299 | WP_000036723.1 | phosphopyruvate hydratase | - |
| EC7215_RS18310 () | 3780857..3782494 | - | 1638 | WP_000210878.1 | CTP synthase (glutamine hydrolyzing) | - |
| EC7215_RS18315 () | 3782722..3783513 | - | 792 | WP_001071648.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| EC7215_RS18320 () | 3783584..3783919 | - | 336 | WP_000254745.1 | endoribonuclease MazF | Toxin Detail |
| EC7215_RS18325 () | 3783919..3784167 | - | 249 | WP_000581937.1 | type II toxin-antitoxin system antitoxin MazE | Antitoxin Detail |
| EC7215_RS18330 () | 3784245..3786479 | - | 2235 | WP_027662018.1 | hypothetical protein | VF |
| EC7215_RS18335 () | 3786527..3787828 | - | 1302 | WP_000046790.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| EC7215_RS18340 () | 3787885..3790641 | + | 2757 | WP_000186450.1 | two-component sensor histidine kinase BarA | - |
| EC7215_RS18345 () | 3790873..3792213 | - | 1341 | WP_000098238.1 | glucarate dehydratase | - |
| EC7215_RS18350 () | 3792234..3793574 | - | 1341 | WP_000211761.1 | glucarate dehydratase family protein | - |
| EC7215_RS18355 () | 3793576..3794928 | - | 1353 | WP_000097082.1 | galactarate/glucarate/glycerate transporter GudP | - |
| EC7215_RS18360 () | 3795363..3795812 | - | 450 | WP_000807750.1 | flavodoxin | - |
| EC7215_RS18365 () | 3795830..3796612 | - | 783 | WP_000890008.1 | tRNA pseudouridine(65) synthase TruC | - |
| EC7215_RS18370 () | 3796612..3796941 | - | 330 | WP_000206990.1 | YqcC family protein | - |
| EC7215_RS18375 () | 3797563..3798108 | - | 546 | WP_000342440.1 | SecY-interacting protein | - |
| EC7215_RS18380 () | 3798176..3799024 | + | 849 | WP_000100426.1 | NADPH-dependent 7-cyano-7-deazaguanine reductase QueF | - |
| EC7215_RS18385 () | 3799136..3800500 | + | 1365 | WP_000627993.1 | nucleotide 5'-monophosphate nucleosidase | - |
| EC7215_RS18390 () | 3801057..3802346 | + | 1290 | WP_000450476.1 | HAAAP family serine/threonine permease SdaC | - |
| EC7215_RS18395 () | 3802404..3803771 | + | 1368 | WP_000626410.1 | L-serine ammonia-lyase II | - |
| EC7215_RS18400 () | 3803883..3804638 | + | 756 | WP_000268232.1 | flap endonuclease Xni | - |
| EC7215_RS18405 () | 3804693..3805841 | - | 1149 | WP_000013588.1 | hypothetical protein | VF |
| EC7215_RS18410 () | 3805869..3806516 | - | 648 | WP_000440775.1 | L-fuculose-phosphate aldolase | - |
| EC7215_RS18415 () | 3807063..3808379 | + | 1317 | WP_000528603.1 | hypothetical protein | VF |
| EC7215_RS18420 () | 3808412..3810187 | + | 1776 | WP_000724153.1 | L-fucose isomerase | - |
| EC7215_RS18425 () | 3810296..3811714 | + | 1419 | WP_000808376.1 | L-fuculokinase | - |
| EC7215_RS18430 () | 3811716..3812138 | + | 423 | WP_000920840.1 | L-fucose mutarotase | - |
| EC7215_RS18435 () | 3812196..3812927 | + | 732 | WP_000642344.1 | L-fucose operon activator | - |
| EC7215_RS18440 () | 3812971..3814071 | - | 1101 | WP_001045520.1 | 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM | - |
| EC7215_RS18445 () | 3814064..3814459 | - | 396 | WP_000203905.1 | DUF423 domain-containing protein | - |
| EC7215_RS18450 () | 3814478..3815395 | - | 918 | WP_000044401.1 | glycine cleavage system transcriptional regulator GcvA | - |
| EC7215_RS18455 () | 3815746..3815973 | - | 228 | WP_000750398.1 | YgdI/YgdR family lipoprotein | - |
| EC7215_RS18460 () | 3816165..3817370 | + | 1206 | WP_001297759.1 | cysteine desulfurase CsdA | - |
| EC7215_RS18465 () | 3817370..3817813 | + | 444 | WP_000184251.1 | cysteine desulfurase sulfur acceptor subunit CsdE | - |
| EC7215_RS18470 () | 3817864..3818670 | - | 807 | WP_000117728.1 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| EC7215_RS18475 () | 3818747..3819844 | - | 1098 | WP_000678646.1 | murein transglycosylase A | - |
| EC7215_RS18495 () | 3820984..3821484 | + | 501 | WP_001297760.1 | hypothetical protein | VF |
| EC7215_RS18500 () | 3821543..3823081 | + | 1539 | WP_001297758.1 | hypothetical protein | VF |
| EC7215_RS18505 () | 3823099..3824436 | + | 1338 | WP_000690896.1 | hypothetical protein | VF |
| EC7215_RS18510 () | 3824433..3825098 | + | 666 | WP_000712314.1 | hypothetical protein | VF |
| EC7215_RS18515 () | 3825111..3826763 | + | 1653 | WP_001246541.1 | hypothetical protein | VF |
| EC7215_RS18520 () | 3826821..3827312 | + | 492 | WP_000997067.1 | hypothetical protein | VF |
| EC7215_RS18525 () | 3827503..3830148 | + | 2646 | WP_000147354.1 | hypothetical protein | VF |
| EC7215_RS18530 () | 3830160..3832532 | + | 2373 | WP_048207402.1 | hypothetical protein | VF |
| EC7215_RS18535 () | 3832535..3833355 | + | 821 | Protein_3557 | DUF4123 domain-containing protein | - |
| EC7215_RS18540 () | 3833399..3833953 | + | 555 | WP_000522561.1 | DUF3304 domain-containing protein | - |
| EC7215_RS18545 () | 3833994..3835943 | + | 1950 | WP_000264514.1 | DUF2235 domain-containing protein | - |
| EC7215_RS18550 () | 3836000..3836488 | + | 489 | WP_021578709.1 | hypothetical protein | - |
| EC7215_RS18555 () | 3836542..3839055 | + | 2514 | WP_021578710.1 | hypothetical protein | VF |
| EC7215_RS18560 () | 3839077..3839679 | + | 603 | WP_000764083.1 | transglycosylase SLT domain-containing protein | - |
| EC7215_RS18565 () | 3839750..3840232 | + | 483 | WP_000845158.1 | hypothetical protein | - |
| EC7215_RS18570 () | 3840310..3841263 | + | 954 | WP_001348788.1 | hypothetical protein | - |
| EC7215_RS18575 () | 3841320..3842497 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| EC7215_RS18580 () | 3842510..3842767 | + | 258 | WP_072132602.1 | hypothetical protein | - |
| EC7215_RS24860 () | 3842891..3843415 | + | 525 | WP_001348777.1 | hypothetical protein | - |
| EC7215_RS18595 () | 3844699..3845121 | + | 423 | WP_000199055.1 | hypothetical protein | - |
| EC7215_RS18605 () | 3845681..3847441 | + | 1761 | WP_000342493.1 | hypothetical protein | VF |
| EC7215_RS18610 () | 3847405..3848484 | + | 1080 | WP_000373311.1 | hypothetical protein | VF |
| EC7215_RS18615 () | 3848465..3849001 | + | 537 | WP_000484008.1 | hypothetical protein | VF |
| EC7215_RS18620 () | 3849005..3849433 | + | 429 | WP_000106970.1 | hypothetical protein | VF |
| EC7215_RS18625 () | 3849433..3850809 | + | 1377 | WP_000157828.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| EC7215_RS18630 () | 3850874..3851422 | + | 549 | WP_000276887.1 | MucR family transcriptional regulator | - |
| EC7215_RS18635 () | 3851768..3853021 | - | 1254 | WP_000016907.1 | N-acetylmuramoyl-L-alanine amidase AmiC | - |
| EC7215_RS18640 () | 3853253..3854584 | + | 1332 | WP_000237947.1 | amino-acid N-acetyltransferase | - |
| EC7215_RS18645 () | 3854646..3856472 | - | 1827 | WP_000775946.1 | exodeoxyribonuclease V subunit alpha | - |
| EC7215_RS18650 () | 3856472..3860014 | - | 3543 | WP_001297553.1 | exodeoxyribonuclease V subunit beta | - |
| EC7215_RS18655 () | 3860007..3862895 | - | 2889 | WP_001138191.1 | pitrilysin | - |
| EC7215_RS18660 () | 3863070..3866438 | - | 3369 | WP_134159212.1 | exodeoxyribonuclease V subunit gamma | - |
| EC7215_RS18665 () | 3866451..3866774 | - | 324 | WP_001276455.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| EC7215_RS18670 () | 3866759..3867166 | - | 408 | WP_001078388.1 | DUF2509 family protein | - |
| EC7215_RS18675 () | 3867163..3867726 | - | 564 | WP_001144319.1 | prepilin peptidase-dependent protein | - |
| EC7215_RS18680 () | 3867717..3868187 | - | 471 | WP_000857056.1 | prepilin peptidase-dependent protein | - |
| EC7215_RS18685 () | 3868372..3869166 | - | 795 | WP_000816232.1 | thymidylate synthase | - |
| EC7215_RS18690 () | 3869173..3870048 | - | 876 | WP_000204658.1 | prolipoprotein diacylglyceryl transferase | - |
| EC7215_RS18695 () | 3870199..3872445 | - | 2247 | WP_000957912.1 | phosphoenolpyruvate--protein phosphotransferase | - |
| EC7215_RS18700 () | 3872458..3872988 | - | 531 | WP_000564489.1 | RNA pyrophosphohydrolase | - |
| EC7215_RS18710 () | 3873673..3874362 | + | 690 | WP_000082188.1 | DNA mismatch repair endonuclease MutH | - |
| EC7215_RS18715 () | 3874431..3875144 | + | 714 | WP_000895624.1 | TerC family protein | - |
| EC7215_RS18720 () | 3875282..3875500 | + | 219 | WP_000758655.1 | lipoprotein YgdR | - |
| EC7215_RS18725 () | 3875608..3876648 | + | 1041 | WP_001199295.1 | NADP(H)-dependent aldo-keto reductase | - |
| EC7215_RS18730 () | 3876680..3877873 | - | 1194 | WP_000004616.1 | lysophospholipid transporter LplT | - |
| EC7215_RS18735 () | 3877866..3880025 | - | 2160 | WP_000899049.1 | bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase | - |
| EC7215_RS18740 () | 3880611..3881642 | + | 1032 | WP_000201048.1 | HTH-type transcriptional regulator GalR | - |
| EC7215_RS18745 () | 3881649..3882911 | - | 1263 | WP_001120711.1 | diaminopimelate decarboxylase | - |
| EC7215_RS18750 () | 3883033..3883968 | + | 936 | WP_000741827.1 | DNA-binding transcriptional regulator LysR | - |
| EC7215_RS18755 () | 3883955..3884647 | - | 693 | WP_000848664.1 | amino acid racemase | - |
| EC7215_RS18760 () | 3884776..3886194 | - | 1419 | WP_000256438.1 | hypothetical protein | VF |
| EC7215_RS18765 () | 3886509..3887270 | - | 762 | WP_000603517.1 | hypothetical protein | VF |
| EC7215_RS18770 () | 3887300..3888136 | - | 837 | WP_000383224.1 | 5-dehydro-4-deoxy-D-glucuronate isomerase | - |
| EC7215_RS18775 () | 3888423..3889604 | - | 1182 | WP_000656022.1 | acetyl-CoA C-acetyltransferase | - |
| EC7215_RS18780 () | 3889859..3891088 | + | 1230 | WP_000065950.1 | amino acid permease | - |
| EC7215_RS18785 () | 3891548..3892180 | + | 633 | WP_001305805.1 | helix-turn-helix transcriptional regulator | - |
| EC7215_RS18790 () | 3892514..3893323 | + | 810 | WP_134159214.1 | transcriptional regulator | - |
| EC7215_RS18795 () | 3893316..3893798 | + | 483 | WP_000568381.1 | hypothetical protein | - |
| EC7215_RS18800 () | 3893831..3893911 | - | 81 | WP_000655821.1 | hypothetical protein | - |
| EC7215_RS18805 () | 3893947..3894372 | - | 426 | WP_000350595.1 | hypothetical protein | - |
| EC7215_RS18810 () | 3894566..3895056 | + | 491 | Protein_3610 | hypothetical protein | - |
| EC7215_RS18815 () | 3895281..3895772 | + | 492 | WP_000102786.1 | hypothetical protein | VF |
| EC7215_RS18820 () | 3896107..3897483 | + | 1377 | WP_000362701.1 | HilA family transcriptional regulator YgeH | - |
| EC7215_RS18825 () | 3897651..3897869 | + | 219 | WP_000184091.1 | hypothetical protein | - |
| EC7215_RS18830 () | 3897952..3898428 | + | 477 | WP_001352551.1 | hypothetical protein | VF |
| EC7215_RS18835 () | 3898473..3899105 | - | 633 | Protein_3615 | response regulator transcription factor | - |
| EC7215_RS24935 () | 3899326..3899757 | - | 432 | WP_001348325.1 | hypothetical protein | - |
| EC7215_RS18850 () | 3899760..3899981 | - | 222 | Protein_3617 | hypothetical protein | - |
| EC7215_RS18855 () | 3899974..3900554 | - | 581 | Protein_3618 | type III secretion apparatus protein OrgA/MxiK | - |
| EC7215_RS18860 () | 3900570..3901304 | - | 735 | WP_000875234.1 | EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein | - |
| EC7215_RS18865 () | 3901345..3901632 | - | 288 | WP_000116713.1 | type III secretion system inner rod subunit SctI | - |
| EC7215_RS18870 () | 3901652..3901892 | - | 241 | Protein_3621 | type III secretion system needle complex protein | - |
| EC7215_RS18875 () | 3901906..3903087 | - | 1182 | WP_001348327.1 | PrgH/EprH family type III secretion apparatus protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|