MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 77359 bp
Accession: NZ_LN885086 Location: 2849837..2927195 Organism: Candidatus Nitrospira inopinata isolate ENR4 Replicon: chromosome
Accession: NZ_LN885086 Location: 2849837..2927195 Organism: Candidatus Nitrospira inopinata isolate ENR4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NITINOP_RS15915 () | 2846592..2847110 | - | 519 | WP_158023428.1 | PEP-CTERM sorting domain-containing protein | - |
| NITINOP_RS13495 () | 2847534..2848675 | + | 1142 | WP_158023429.1 | IS3 family transposase | - |
| NITINOP_RS15920 () | 2848983..2849744 | + | 762 | WP_197549079.1 | IS5 family transposase | - |
| NITINOP_RS13510 () | 2849893..2851014 | - | 1122 | WP_062486845.1 | hypothetical protein ; Integrase | Integrase |
| NITINOP_RS13515 () | 2851001..2851198 | - | 198 | WP_062486848.1 | helix-turn-helix domain-containing protein | - |
| NITINOP_RS13520 () | 2851557..2852099 | + | 543 | WP_062486850.1 | transcriptional repressor LexA | - |
| NITINOP_RS13525 () | 2852119..2853303 | + | 1185 | WP_162264719.1 | hypothetical protein | - |
| NITINOP_RS13530 () | 2853346..2856336 | + | 2991 | WP_082634032.1 | DNA polymerase III subunit alpha | - |
| NITINOP_RS13535 () | 2856355..2857257 | + | 903 | WP_062486854.1 | DUF72 domain-containing protein | - |
| NITINOP_RS13540 () | 2857751..2859913 | - | 2163 | WP_082634033.1 | multicopper oxidase domain-containing protein | - |
| NITINOP_RS13545 () | 2859973..2860194 | - | 222 | WP_062486858.1 | hypothetical protein | - |
| NITINOP_RS13560 () | 2861243..2863948 | - | 2706 | WP_062486864.1 | cation-translocating P-type ATPase | - |
| NITINOP_RS13565 () | 2863945..2864259 | - | 315 | WP_062486866.1 | hypothetical protein | - |
| NITINOP_RS15925 () | 2864259..2864435 | - | 177 | WP_082633833.1 | YHS domain-containing protein | - |
| NITINOP_RS13570 () | 2864476..2866839 | - | 2364 | WP_062486868.1 | hypothetical protein | - |
| NITINOP_RS13575 () | 2866908..2867576 | - | 669 | WP_062488093.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| NITINOP_RS15930 () | 2867569..2867802 | - | 234 | WP_082633834.1 | DUF2933 domain-containing protein | - |
| NITINOP_RS13580 () | 2867853..2869685 | - | 1833 | WP_062486870.1 | alpha-glucan family phosphorylase | - |
| NITINOP_RS13585 () | 2869682..2870212 | - | 531 | WP_062486872.1 | hypothetical protein | - |
| NITINOP_RS13590 () | 2870187..2870876 | - | 690 | WP_062486874.1 | class I SAM-dependent methyltransferase | - |
| NITINOP_RS13595 () | 2871019..2871234 | - | 216 | WP_062486876.1 | DUF2934 domain-containing protein | - |
| NITINOP_RS13600 () | 2871414..2871752 | - | 339 | WP_062486878.1 | hypothetical protein | - |
| NITINOP_RS13605 () | 2871890..2872228 | - | 339 | WP_062486880.1 | hypothetical protein | - |
| NITINOP_RS13610 () | 2872299..2872490 | - | 192 | WP_158023430.1 | hypothetical protein | - |
| NITINOP_RS13615 () | 2872739..2873143 | - | 405 | Protein_2665 | IS481 family transposase ISGdi10 | Transposase |
| NITINOP_RS13620 () | 2873445..2874050 | - | 606 | WP_062486885.1 | sigma-70 family RNA polymerase sigma factor | - |
| NITINOP_RS13625 () | 2874047..2877214 | - | 3168 | WP_062486887.1 | efflux RND transporter permease subunit | - |
| NITINOP_RS16235 () | 2877221..2878474 | - | 1254 | WP_197549081.1 | efflux RND transporter periplasmic adaptor subunit | - |
| NITINOP_RS13635 () | 2878471..2879775 | - | 1305 | WP_082633835.1 | TolC family protein | - |
| NITINOP_RS16240 () | 2879860..2880216 | - | 357 | WP_158023431.1 | hypothetical protein | - |
| NITINOP_RS13640 () | 2880564..2882474 | - | 1911 | WP_062486890.1 | cation-translocating P-type ATPase | - |
| NITINOP_RS16245 () | 2882567..2882647 | - | 81 | WP_158023514.1 | SHOCT domain-containing protein | - |
| NITINOP_RS13645 () | 2882823..2885945 | - | 3123 | WP_062486892.1 | efflux RND transporter permease subunit | - |
| NITINOP_RS13650 () | 2885975..2887108 | - | 1134 | WP_062486894.1 | efflux RND transporter periplasmic adaptor subunit | - |
| NITINOP_RS13655 () | 2887273..2888487 | - | 1215 | WP_162264720.1 | TolC family protein | - |
| NITINOP_RS13660 () | 2888611..2888811 | - | 201 | WP_062486898.1 | hypothetical protein | - |
| NITINOP_RS13665 () | 2888858..2889046 | - | 189 | WP_062486900.1 | hypothetical protein | - |
| NITINOP_RS13670 () | 2889783..2892941 | - | 3159 | WP_062486902.1 | efflux RND transporter permease subunit | - |
| NITINOP_RS13675 () | 2892992..2894908 | - | 1917 | WP_162264721.1 | efflux RND transporter periplasmic adaptor subunit | - |
| NITINOP_RS13680 () | 2894925..2896214 | - | 1290 | WP_062486907.1 | TolC family protein | - |
| NITINOP_RS13685 () | 2896875..2897279 | - | 405 | WP_062486909.1 | carboxymuconolactone decarboxylase family protein | - |
| NITINOP_RS13690 () | 2897327..2897680 | - | 354 | WP_062486910.1 | cation transporter | - |
| NITINOP_RS13695 () | 2897780..2898184 | - | 405 | WP_158023432.1 | mercury transporter | - |
| NITINOP_RS13700 () | 2898190..2898627 | - | 438 | WP_062486914.1 | IS607 family transposase ISCbo6 | Transposase |
| NITINOP_RS15940 () | 2898992..2899465 | - | 474 | WP_082633838.1 | JAB domain-containing protein | - |
| NITINOP_RS16250 () | 2899696..2899854 | + | 159 | WP_158023433.1 | hypothetical protein | - |
| NITINOP_RS13710 () | 2900269..2900535 | + | 267 | WP_062486917.1 | hypothetical protein | VF |
| NITINOP_RS13715 () | 2900537..2900869 | + | 333 | WP_062486919.1 | hypothetical protein | VF |
| NITINOP_RS13720 () | 2900923..2903382 | + | 2460 | WP_062486921.1 | hypothetical protein | VF |
| NITINOP_RS13725 () | 2903392..2904435 | + | 1044 | WP_062486923.1 | type IV secretion system protein | - |
| NITINOP_RS13730 () | 2904439..2905164 | + | 726 | WP_062486925.1 | type IV secretion system protein | - |
| NITINOP_RS13735 () | 2905229..2905987 | + | 759 | WP_062486928.1 | hypothetical protein | VF |
| NITINOP_RS13740 () | 2906003..2906929 | + | 927 | WP_062486930.1 | hypothetical protein | VF |
| NITINOP_RS13745 () | 2906939..2908336 | + | 1398 | WP_062486932.1 | hypothetical protein | VF |
| NITINOP_RS13750 () | 2908317..2909426 | + | 1110 | WP_062486934.1 | hypothetical protein | VF |
| NITINOP_RS13755 () | 2909435..2911498 | + | 2064 | WP_062486935.1 | hypothetical protein | VF |
| NITINOP_RS13760 () | 2911495..2912472 | + | 978 | WP_062486937.1 | hypothetical protein | VF |
| NITINOP_RS13765 () | 2912491..2913594 | + | 1104 | WP_062486939.1 | hypothetical protein | - |
| NITINOP_RS13770 () | 2913641..2913919 | + | 279 | WP_082633839.1 | hypothetical protein | - |
| NITINOP_RS13775 () | 2914293..2914925 | + | 633 | WP_062486944.1 | hypothetical protein | - |
| NITINOP_RS13780 () | 2915327..2916379 | - | 1053 | WP_197549083.1 | DUF1738 domain-containing protein | - |
| NITINOP_RS13785 () | 2916985..2918424 | + | 1440 | WP_062486946.1 | toll/interleukin-1 receptor domain-containing protein | - |
| NITINOP_RS13790 () | 2918424..2919950 | + | 1527 | WP_062486948.1 | hypothetical protein | - |
| NITINOP_RS13795 () | 2920399..2921130 | - | 732 | WP_158023434.1 | relaxase/mobilization nuclease domain-containing protein | - |
| NITINOP_RS13800 () | 2921379..2921936 | - | 558 | WP_062486952.1 | plasmid mobilization relaxosome protein MobC | - |
| NITINOP_RS13805 () | 2922248..2923063 | + | 816 | WP_062486954.1 | hypothetical protein | - |
| NITINOP_RS13810 () | 2923152..2923580 | - | 429 | WP_062486956.1 | hypothetical protein | - |
| NITINOP_RS13815 () | 2923644..2923886 | - | 243 | WP_062486958.1 | hypothetical protein | - |
| NITINOP_RS13820 () | 2924528..2924905 | + | 378 | WP_062486960.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NITINOP_RS13825 () | 2924886..2925221 | + | 336 | WP_062486962.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NITINOP_RS13835 () | 2927582..2928175 | - | 594 | WP_062486965.1 | XTP/dITP diphosphatase | - |
| NITINOP_RS13840 () | 2928186..2928908 | - | 723 | WP_173644432.1 | ribonuclease PH | - |
| NITINOP_RS13845 () | 2929200..2930342 | + | 1143 | WP_062486967.1 | response regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|