MGE detailed information
MGE type: Genomic_island MGE length: 14588 bp
Accession: NZ_LN854573 Location: 2633020..2647607 Organism: Pseudomonas sp. URMO17WK12:I11 isolate Shine Replicon: chromosome
Accession: NZ_LN854573 Location: 2633020..2647607 Organism: Pseudomonas sp. URMO17WK12:I11 isolate Shine Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWM52_RS11895 () | 2628228..2628500 | + | 273 | WP_010464608.1 | oxidative damage protection protein | - |
| AWM52_RS11905 () | 2629020..2629481 | + | 462 | WP_027922180.1 | DUF4234 domain-containing protein | - |
| AWM52_RS11910 () | 2629538..2629984 | - | 447 | WP_027922181.1 | hypothetical protein | - |
| AWM52_RS11915 () | 2630249..2630886 | + | 638 | Protein_2365 | hypothetical protein | - |
| AWM52_RS11920 () | 2630956..2631930 | + | 975 | WP_059181798.1 | alpha/beta fold hydrolase | - |
| AWM52_RS11925 () | 2631961..2632377 | + | 417 | WP_027922183.1 | hypothetical protein | - |
| AWM52_RS11930 () | 2632384..2632836 | + | 453 | WP_059181799.1 | hypothetical protein | - |
| AWM52_RS11935 () | 2633020..2633250 | + | 231 | WP_027922185.1 | antitoxin | Antitoxin Detail |
| AWM52_RS11940 () | 2633250..2633657 | + | 408 | WP_027922186.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| AWM52_RS11945 () | 2633740..2634066 | - | 327 | WP_027922187.1 | hypothetical protein | - |
| AWM52_RS11950 () | 2634446..2635837 | - | 1392 | WP_027922188.1 | GABA permease | - |
| AWM52_RS11955 () | 2636390..2637163 | + | 774 | WP_027922189.1 | hypothetical protein | VF |
| AWM52_RS11960 () | 2637177..2637923 | + | 747 | WP_027922190.1 | ABC transporter substrate-binding protein | - |
| AWM52_RS11965 () | 2638002..2638697 | + | 696 | WP_027922191.1 | ABC transporter permease | - |
| AWM52_RS11970 () | 2638694..2639383 | + | 690 | WP_027922192.1 | ABC transporter permease | - |
| AWM52_RS11975 () | 2639364..2640596 | + | 1233 | WP_059181800.1 | methyltransferase | - |
| AWM52_RS11980 () | 2640940..2641764 | + | 825 | WP_059181801.1 | FkbM family methyltransferase | - |
| AWM52_RS11990 () | 2642093..2642734 | - | 642 | WP_059181802.1 | BRCT domain-containing protein | - |
| AWM52_RS11995 () | 2642923..2643135 | + | 213 | WP_059181803.1 | hypothetical protein | - |
| AWM52_RS12000 () | 2643407..2644384 | + | 978 | WP_059181804.1 | ImmA/IrrE family metallo-endopeptidase | - |
| AWM52_RS12005 () | 2644381..2645022 | + | 642 | WP_059181805.1 | hypothetical protein | - |
| AWM52_RS28920 () | 2645032..2645319 | - | 288 | Protein_2383 | Presumed portal vertex protein | - |
| AWM52_RS12010 () | 2645305..2645790 | + | 486 | WP_059181806.1 | hypothetical protein ; Integrase | Integrase |
| AWM52_RS12015 () | 2645853..2647010 | + | 1158 | WP_059181807.1 | DUF4935 domain-containing protein | - |
| AWM52_RS12020 () | 2647395..2647607 | + | 213 | WP_059181808.1 | hypothetical protein | - |
| AWM52_RS12025 () | 2647716..2648426 | - | 711 | WP_059181809.1 | SDR family oxidoreductase | - |
| AWM52_RS12030 () | 2648474..2649130 | - | 657 | WP_059181810.1 | DsbA family oxidoreductase | - |
| AWM52_RS12035 () | 2649127..2649348 | - | 222 | WP_027922199.1 | 4-oxalocrotonate tautomerase family protein | - |
| AWM52_RS12040 () | 2650044..2650337 | + | 294 | WP_059181811.1 | DUF3077 domain-containing protein | - |
| AWM52_RS12045 () | 2650393..2652006 | - | 1614 | WP_059181812.1 | Fic family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|