MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 154559 bp
Accession: NZ_LN681228 Location: 1..154559 Organism: Xenorhabdus nematophila AN6/1 Replicon: plasmid II
Accession: NZ_LN681228 Location: 1..154559 Organism: Xenorhabdus nematophila AN6/1 Replicon: plasmid II
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XNC2_RS19600 () | 151..936 | + | 786 | WP_022635572.1 | Sporulation initiation inhibitor protein Soj | VF |
| XNC2_RS19605 () | 940..2115 | + | 1176 | WP_013141528.1 | ParB/RepB/Spo0J family partition protein | - |
| XNC2_RS19610 () | 2164..2436 | + | 273 | WP_010845935.1 | helix-turn-helix domain-containing protein | - |
| XNC2_RS19615 () | 2488..3123 | - | 636 | WP_041573976.1 | N-6 DNA methylase | - |
| XNC2_RS23400 () | 3211..3354 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| XNC2_RS19620 () | 3674..4051 | + | 378 | WP_041574005.1 | hypothetical protein | - |
| XNC2_RS19630 () | 4282..4488 | + | 207 | WP_143767690.1 | hypothetical protein | - |
| XNC2_RS19635 () | 4516..4920 | - | 405 | WP_013141535.1 | hypothetical protein | - |
| XNC2_RS19640 () | 4931..7120 | - | 2190 | WP_013141536.1 | DNA topoisomerase 3 | - |
| XNC2_RS19645 () | 7120..7353 | - | 234 | WP_013184414.1 | hypothetical protein | - |
| XNC2_RS19650 () | 7335..7952 | - | 618 | WP_013184413.1 | hypothetical protein | - |
| XNC2_RS19655 () | 8119..9982 | + | 1864 | Protein_11 | TraI domain-containing protein | - |
| XNC2_RS19660 () | 9979..10509 | + | 531 | WP_013141538.1 | hypothetical protein | - |
| XNC2_RS19665 () | 10543..11583 | - | 1041 | WP_013141539.1 | IS481 family transposase ISVvu4 | Transposase |
| XNC2_RS23595 () | 11696..11992 | + | 297 | Protein_14 | type IV secretion system DNA-binding domain-containing protein | - |
| XNC2_RS23145 () | 11978..12382 | + | 405 | Protein_15 | DUF4400 domain-containing protein | - |
| XNC2_RS19675 () | 12391..12837 | + | 447 | WP_013184411.1 | hypothetical protein | - |
| XNC2_RS19680 () | 12847..13224 | + | 378 | WP_013141541.1 | hypothetical protein | - |
| XNC2_RS19685 () | 13224..13886 | + | 663 | WP_013141542.1 | hypothetical protein | - |
| XNC2_RS23405 () | 14067..14210 | + | 144 | WP_021326607.1 | hypothetical protein | - |
| XNC2_RS19690 () | 14276..14569 | + | 294 | Protein_20 | pilus assembly protein | - |
| XNC2_RS19695 () | 14553..15470 | + | 918 | WP_013141544.1 | type-F conjugative transfer system secretin TraK | - |
| XNC2_RS19700 () | 15470..16783 | + | 1314 | WP_041573865.1 | conjugal transfer protein TraB | - |
| XNC2_RS19705 () | 16780..17358 | + | 579 | WP_013141546.1 | type IV conjugative transfer system lipoprotein TraV | - |
| XNC2_RS19710 () | 17371..17754 | + | 384 | WP_013184407.1 | TrbC/VirB2 family protein | - |
| XNC2_RS19720 () | 17874..19045 | + | 1172 | WP_143767691.1 | IS3 family transposase ISShes13 | Transposase |
| XNC2_RS19725 () | 19265..24751 | + | 5487 | WP_041573977.1 | DUF4165 domain-containing protein | - |
| XNC2_RS19730 () | 24900..25607 | + | 708 | WP_013141551.1 | DsbC family protein | - |
| XNC2_RS19735 () | 25604..28048 | + | 2445 | WP_013141552.1 | type IV secretion system protein TraC | - |
| XNC2_RS19740 () | 28063..28380 | + | 318 | WP_013141553.1 | hypothetical protein | - |
| XNC2_RS19745 () | 28377..28907 | + | 531 | WP_013141554.1 | S26 family signal peptidase | - |
| XNC2_RS19750 () | 28870..30135 | + | 1266 | WP_013141555.1 | conjugal transfer protein TraW | - |
| XNC2_RS19755 () | 30132..30803 | + | 672 | WP_013141556.1 | EAL domain-containing protein | - |
| XNC2_RS19760 () | 30800..31807 | + | 1008 | WP_013141557.1 | TraU family protein | - |
| XNC2_RS19765 () | 31923..34727 | + | 2805 | WP_041573978.1 | conjugal transfer mating pair stabilization protein TraN | - |
| XNC2_RS19770 () | 34765..35628 | - | 864 | WP_013141559.1 | hypothetical protein | - |
| XNC2_RS19775 () | 35750..36391 | - | 642 | WP_041979271.1 | hypothetical protein | - |
| XNC2_RS19780 () | 36684..37004 | + | 321 | WP_013141561.1 | hypothetical protein | - |
| XNC2_RS19785 () | 37243..37494 | + | 252 | WP_013141563.1 | hypothetical protein | - |
| XNC2_RS19790 () | 37713..38681 | + | 969 | WP_013141564.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| XNC2_RS19795 () | 38692..39597 | + | 906 | WP_013141565.1 | hypothetical protein | - |
| XNC2_RS19800 () | 39757..40749 | + | 993 | WP_038220030.1 | phage recombination protein Bet | - |
| XNC2_RS19805 () | 40812..41847 | + | 1036 | Protein_42 | YqaJ viral recombinase family protein | - |
| XNC2_RS19810 () | 42046..43323 | + | 1278 | WP_041573979.1 | DUF3150 domain-containing protein | - |
| XNC2_RS19815 () | 43409..45205 | + | 1797 | WP_013141568.1 | VWA domain-containing protein | - |
| XNC2_RS19820 () | 45267..45602 | + | 336 | WP_038220028.1 | hypothetical protein | - |
| XNC2_RS19825 () | 45870..46416 | + | 547 | Protein_46 | hypothetical protein | - |
| XNC2_RS19830 () | 46497..46997 | + | 501 | WP_013141570.1 | hypothetical protein | - |
| XNC2_RS19835 () | 47071..47955 | + | 885 | Protein_48 | DNA adenine modification methylase | - |
| XNC2_RS21950 () | 48020..48244 | + | 225 | Protein_49 | 2Fe-2S ferredoxin-like protein | - |
| XNC2_RS19845 () | 48306..48695 | + | 390 | WP_013141572.1 | hypothetical protein | - |
| XNC2_RS19850 () | 48685..49140 | + | 456 | WP_041573981.1 | hypothetical protein | - |
| XNC2_RS19855 () | 49145..49369 | + | 225 | WP_041979292.1 | hypothetical protein | - |
| XNC2_RS19860 () | 49561..49791 | + | 231 | WP_038220026.1 | hypothetical protein | - |
| XNC2_RS19865 () | 49995..51620 | + | 1626 | WP_041573982.1 | DNA cytosine methyltransferase | - |
| XNC2_RS19870 () | 51681..52112 | + | 432 | WP_038220024.1 | hypothetical protein | - |
| XNC2_RS19875 () | 52185..52739 | + | 555 | WP_038220023.1 | hypothetical protein | - |
| XNC2_RS19880 () | 52974..53267 | + | 294 | WP_013141579.1 | hypothetical protein | - |
| XNC2_RS19885 () | 53335..53721 | + | 387 | WP_013141580.1 | hypothetical protein | - |
| XNC2_RS19890 () | 53807..56113 | + | 2307 | Protein_59 | phosphoadenosine phosphosulfate reductase | - |
| XNC2_RS19895 () | 56566..56769 | + | 204 | WP_013141582.1 | hypothetical protein | - |
| XNC2_RS19900 () | 56841..57446 | + | 606 | WP_013141583.1 | 5'-deoxynucleotidase | - |
| XNC2_RS19905 () | 57439..57705 | + | 267 | WP_013141584.1 | hypothetical protein | - |
| XNC2_RS19910 () | 57702..57914 | + | 213 | WP_013141585.1 | hypothetical protein | - |
| XNC2_RS19915 () | 57984..58541 | + | 558 | WP_021293661.1 | hypothetical protein | - |
| XNC2_RS19920 () | 58617..59468 | + | 852 | WP_041573983.1 | hypothetical protein | - |
| XNC2_RS19925 () | 59931..60317 | + | 387 | WP_013141589.1 | hypothetical protein | - |
| XNC2_RS19930 () | 60494..62221 | + | 1728 | WP_041574007.1 | toprim domain-containing protein | - |
| XNC2_RS19935 () | 62208..62489 | + | 282 | WP_041573984.1 | hypothetical protein | - |
| XNC2_RS19940 () | 62562..62801 | + | 240 | WP_021326768.1 | hypothetical protein | - |
| XNC2_RS23415 () | 62811..62927 | + | 117 | WP_013141592.1 | hypothetical protein | - |
| XNC2_RS19945 () | 63057..64457 | - | 1401 | WP_013141593.1 | ISKra4 family transposase ISXne1 | Transposase |
| XNC2_RS19950 () | 64586..65224 | - | 639 | WP_081480233.1 | plasmid pRiA4b ORF-3 family protein | - |
| XNC2_RS19955 () | 65263..65553 | - | 291 | WP_041573985.1 | hypothetical protein | - |
| XNC2_RS19960 () | 65637..65789 | - | 153 | Protein_74 | IS5 family transposase ISPlu14 | Transposase |
| XNC2_RS19965 () | 66062..66403 | - | 342 | WP_013141597.1 | hypothetical protein | - |
| XNC2_RS19970 () | 66596..66937 | - | 342 | WP_041573986.1 | hypothetical protein | - |
| XNC2_RS19975 () | 66965..67300 | - | 336 | Protein_77 | IS3 family transposase ISYal1 | Transposase |
| XNC2_RS19980 () | 67351..69318 | - | 1968 | WP_013141600.1 | hypothetical protein | - |
| XNC2_RS19985 () | 69646..70343 | - | 698 | Protein_79 | IS1 family transposase IS1R | Transposase |
| XNC2_RS22480 () | 70727..70930 | + | 204 | WP_143767692.1 | hypothetical protein | - |
| XNC2_RS19995 () | 70958..73936 | - | 2979 | WP_013141603.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| XNC2_RS20000 () | 73966..74589 | - | 624 | WP_013141604.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| XNC2_RS20005 () | 74740..74970 | - | 231 | Protein_83 | IS481 family transposase ISVvu4 | Transposase |
| XNC2_RS20010 () | 75119..75814 | - | 696 | WP_041573990.1 | IS6 family transposase ISYps1 | Transposase |
| XNC2_RS22485 () | 75829..76314 | - | 486 | WP_143767693.1 | hypothetical protein | - |
| XNC2_RS20015 () | 76307..77200 | - | 894 | WP_013141608.1 | AAA family ATPase | - |
| XNC2_RS20020 () | 77197..78393 | - | 1197 | WP_050986661.1 | MFS transporter | - |
| XNC2_RS20025 () | 78408..79607 | - | 1200 | WP_143767694.1 | hypothetical protein | - |
| XNC2_RS22490 () | 79685..79855 | - | 171 | WP_156148031.1 | hypothetical protein | - |
| XNC2_RS20030 () | 80244..81263 | + | 1020 | WP_013141611.1 | IS110 family transposase ISXne4 | Transposase |
| XNC2_RS23420 () | 81400..81540 | - | 141 | WP_162097870.1 | hypothetical protein | - |
| XNC2_RS20035 () | 81996..83015 | - | 1020 | WP_013141611.1 | IS110 family transposase ISXne4 | Transposase |
| XNC2_RS20040 () | 83157..83681 | + | 525 | Protein_93 | 3'-5' exonuclease | - |
| XNC2_RS20045 () | 83678..84169 | + | 492 | WP_013141613.1 | hypothetical protein | - |
| XNC2_RS20050 () | 84475..85350 | + | 876 | WP_013141614.1 | DNA replication terminus site-binding protein | - |
| XNC2_RS20780 () | 85417..86106 | - | 690 | WP_050986662.1 | Tn3 family transposase ISPsy42 | Transposase |
| XNC2_RS20055 () | 86110..88287 | - | 2178 | WP_071837887.1 | Tn3 family transposase | - |
| XNC2_RS20060 () | 88312..88623 | + | 312 | Protein_98 | hypothetical protein | - |
| XNC2_RS20065 () | 88671..88958 | + | 288 | WP_013141615.1 | hypothetical protein | - |
| XNC2_RS20070 () | 89090..89497 | - | 408 | WP_045107714.1 | hypothetical protein | - |
| XNC2_RS20075 () | 89994..91022 | - | 1029 | WP_013141617.1 | IS110 family transposase IS5708 | Transposase |
| XNC2_RS20080 () | 91113..93698 | - | 2586 | Protein_102 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| XNC2_RS20085 () | 93702..94121 | + | 420 | WP_013141619.1 | IS3 family transposase ISShes13 | Transposase |
| XNC2_RS20090 () | 94207..94962 | - | 756 | WP_143767695.1 | hypothetical protein | - |
| XNC2_RS20095 () | 94943..95476 | - | 534 | WP_113935478.1 | IS630 family transposase ISVsa8 | Transposase |
| XNC2_RS20100 () | 95505..95945 | - | 441 | WP_010847891.1 | helix-turn-helix domain-containing protein | - |
| XNC2_RS20105 () | 96192..96808 | + | 617 | Protein_107 | Tn3 family transposase TnpR_ISAli20 | Transposase |
| XNC2_RS20110 () | 97033..97950 | + | 918 | WP_041573992.1 | hypothetical protein | - |
| XNC2_RS22495 () | 98257..98499 | + | 243 | Protein_109 | IS66 family transposase ISCro1 | Transposase |
| XNC2_RS20120 () | 98781..99329 | - | 549 | WP_038220575.1 | Tn3 family transposase ISEc63 | Transposase |
| XNC2_RS20125 () | 99461..102328 | + | 2868 | Protein_111 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| XNC2_RS20130 () | 102370..105411 | - | 3042 | Protein_112 | Tn3 family transposase ISPsy42 | Transposase |
| XNC2_RS20135 () | 105560..106135 | + | 576 | WP_013141628.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| XNC2_RS20140 () | 106132..106404 | + | 273 | WP_013141629.1 | hypothetical protein | - |
| XNC2_RS20145 () | 106552..108336 | + | 1785 | WP_013141630.1 | KAP family P-loop domain protein | - |
| XNC2_RS20150 () | 108336..109088 | + | 753 | WP_013141631.1 | hypothetical protein | - |
| XNC2_RS20155 () | 109070..110389 | + | 1320 | WP_173363124.1 | 7-cyano-7-deazaguanine synthase | - |
| XNC2_RS20160 () | 110398..111111 | + | 714 | WP_041574015.1 | TatD family hydrolase | - |
| XNC2_RS20165 () | 111137..111451 | - | 315 | WP_041573994.1 | hypothetical protein | - |
| XNC2_RS20785 () | 111495..112370 | - | 876 | WP_013141635.1 | transcriptional regulator | - |
| XNC2_RS20185 () | 112795..113205 | + | 411 | WP_013141637.1 | helix-turn-helix domain-containing protein | - |
| XNC2_RS23155 () | 113401..113559 | + | 159 | Protein_122 | ISKra4 family transposase | - |
| XNC2_RS20190 () | 113987..114817 | + | 831 | WP_013141640.1 | KilA-N domain-containing protein | - |
| XNC2_RS20195 () | 114825..115436 | + | 612 | WP_013141641.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| XNC2_RS20200 () | 115701..116177 | - | 477 | Protein_125 | ISKra4 family transposase ISXne1 | Transposase |
| XNC2_RS20210 () | 116233..117482 | + | 1250 | WP_113935518.1 | IS3 family transposase ISShes13 | Transposase |
| XNC2_RS20215 () | 117481..118002 | - | 522 | Protein_127 | ISKra4 family transposase ISXne1 | Transposase |
| XNC2_RS23160 () | 118032..118112 | - | 81 | Protein_128 | IS1 family transposase | - |
| XNC2_RS20220 () | 118165..121206 | - | 3042 | WP_013141646.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| XNC2_RS20225 () | 121338..121886 | + | 549 | WP_038220575.1 | Tn3 family transposase ISEc63 | Transposase |
| XNC2_RS20230 () | 122074..122973 | - | 900 | Protein_131 | IS982 family transposase | - |
| XNC2_RS22515 () | 123190..123432 | - | 243 | Protein_132 | IS66 family transposase ISCro1 | Transposase |
| XNC2_RS20240 () | 123739..124656 | - | 918 | WP_041573992.1 | hypothetical protein | - |
| XNC2_RS20245 () | 124881..125497 | - | 617 | Protein_134 | Tn3 family transposase TnpR_ISAli20 | Transposase |
| XNC2_RS20250 () | 125785..126291 | + | 507 | WP_041573995.1 | hypothetical protein | - |
| XNC2_RS20255 () | 126661..127299 | + | 639 | WP_081480233.1 | plasmid pRiA4b ORF-3 family protein | - |
| XNC2_RS20260 () | 127428..128828 | + | 1401 | WP_013141593.1 | ISKra4 family transposase ISXne1 | Transposase |
| XNC2_RS20265 () | 128977..130017 | + | 1041 | WP_013141651.1 | DNA-binding protein | - |
| XNC2_RS20270 () | 130017..130295 | + | 279 | WP_013141652.1 | hypothetical protein | - |
| XNC2_RS20275 () | 130304..130639 | + | 336 | Protein_140 | AAA family ATPase | - |
| XNC2_RS20280 () | 130746..131786 | + | 1041 | WP_013141539.1 | IS481 family transposase ISVvu4 | Transposase |
| XNC2_RS20285 () | 131932..133140 | + | 1209 | WP_013184655.1 | IS256 family transposase IS1414 | Transposase |
| XNC2_RS20290 () | 133208..133627 | - | 420 | WP_013141656.1 | H-NS histone family protein | - |
| XNC2_RS20295 () | 133629..133922 | - | 294 | WP_013141657.1 | hypothetical protein | - |
| XNC2_RS20300 () | 133939..134922 | - | 984 | WP_036845016.1 | ParM/StbA family protein | - |
| XNC2_RS20305 () | 135037..135306 | - | 270 | WP_013141659.1 | hypothetical protein | - |
| XNC2_RS20310 () | 135420..135959 | + | 540 | WP_161783458.1 | hypothetical protein | - |
| XNC2_RS20315 () | 135964..136251 | + | 288 | WP_041573997.1 | hypothetical protein | - |
| XNC2_RS20320 () | 136236..137336 | + | 1101 | WP_013141662.1 | plasmid replication protein | - |
| XNC2_RS20325 () | 138419..138853 | - | 435 | WP_041573998.1 | hypothetical protein | - |
| XNC2_RS20330 () | 138871..139533 | - | 663 | Protein_151 | phosphoadenosine phosphosulfate reductase family protein | - |
| XNC2_RS20335 () | 139662..140114 | - | 453 | Protein_152 | phosphohydrolase | - |
| XNC2_RS20340 () | 140381..140989 | + | 609 | WP_013141664.1 | hypothetical protein | - |
| XNC2_RS20345 () | 140994..141515 | + | 522 | WP_013141665.1 | hypothetical protein | - |
| XNC2_RS20350 () | 141518..142039 | + | 522 | WP_013141666.1 | hypothetical protein | - |
| XNC2_RS20355 () | 142138..142611 | + | 474 | WP_013141668.1 | hypothetical protein | - |
| XNC2_RS20360 () | 142622..142915 | + | 294 | WP_162097871.1 | hypothetical protein | - |
| XNC2_RS20365 () | 142920..143771 | + | 852 | WP_013141670.1 | hypothetical protein | - |
| XNC2_RS20370 () | 143771..144730 | + | 960 | WP_041574000.1 | S49 family peptidase | - |
| XNC2_RS20375 () | 144746..145582 | + | 837 | WP_013141672.1 | DsbA family protein | - |
| XNC2_RS20380 () | 145639..146067 | + | 429 | WP_013141673.1 | hypothetical protein | - |
| XNC2_RS20385 () | 146124..146489 | + | 366 | WP_013141674.1 | hypothetical protein | - |
| XNC2_RS20390 () | 146483..146929 | + | 447 | WP_013141675.1 | hypothetical protein | - |
| XNC2_RS20395 () | 146926..147174 | + | 249 | Protein_164 | nitrite reductase | - |
| XNC2_RS20400 () | 147170..147976 | + | 807 | Protein_165 | hypothetical protein | - |
| XNC2_RS20410 () | 148193..148720 | + | 528 | WP_038220206.1 | thermonuclease family protein | - |
| XNC2_RS20415 () | 148778..149050 | + | 273 | WP_013141679.1 | HU family DNA-binding protein | - |
| XNC2_RS20420 () | 149139..149432 | + | 294 | WP_038220236.1 | chromosome segregation protein ParM | - |
| XNC2_RS20425 () | 149461..149763 | - | 303 | WP_038220207.1 | XRE family transcriptional regulator | Antitoxin Detail |
| XNC2_RS20430 () | 149769..150119 | - | 351 | WP_013141682.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XNC2_RS23600 () | 150308..150559 | + | 252 | WP_041574001.1 | hypothetical protein | - |
| XNC2_RS20440 () | 150559..150753 | + | 195 | WP_013141683.1 | hypothetical protein | - |
| XNC2_RS20445 () | 150764..151135 | + | 372 | WP_038220209.1 | hypothetical protein | - |
| XNC2_RS20450 () | 151128..151598 | + | 471 | WP_041574002.1 | hypothetical protein | - |
| XNC2_RS23170 () | 151601..151798 | + | 198 | WP_041574003.1 | hypothetical protein | - |
| XNC2_RS20460 () | 152019..152381 | + | 363 | WP_038220238.1 | hypothetical protein | - |
| XNC2_RS20465 () | 152374..153624 | + | 1251 | WP_038220211.1 | site-specific DNA-methyltransferase | - |
| XNC2_RS20470 () | 153621..153821 | + | 201 | WP_038220213.1 | hypothetical protein | - |
| XNC2_RS23175 () | 153859..154044 | + | 186 | WP_041574004.1 | hypothetical protein | - |
| XNC2_RS20480 () | 154196..154414 | + | 219 | WP_013141690.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|