MGE detailed information
MGE type: Prophage MGE length: 48991 bp
Accession: NZ_LN554884 Location: 1781164..1830154 Organism: Staphylococcus xylosus strain C2a Replicon: chromosome
Accession: NZ_LN554884 Location: 1781164..1830154 Organism: Staphylococcus xylosus strain C2a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SXYL_RS08425 () | 1776322..1776753 | - | 432 | WP_017724208.1 | division/cell wall cluster transcriptional repressor MraZ | - |
| SXYL_RS08430 () | 1776902..1778515 | - | 1614 | WP_047172514.1 | bacillithiol biosynthesis cysteine-adding enzyme BshC | - |
| SXYL_RS08435 () | 1778788..1779234 | + | 447 | WP_042362891.1 | N-acetyltransferase | - |
| SXYL_RS08440 () | 1779368..1780054 | - | 687 | WP_047172515.1 | YjjG family noncanonical pyrimidine nucleotidase | - |
| SXYL_RS08445 () | 1780172..1780306 | - | 135 | WP_047172516.1 | beta-class phenol-soluble modulin | - |
| SXYL_RS13290 () | 1780350..1780484 | - | 135 | WP_017724203.1 | beta-class phenol-soluble modulin | - |
| SXYL_RS08455 () | 1780531..1780665 | - | 135 | WP_047172517.1 | beta-class phenol-soluble modulin | - |
| SXYL_RS08460 () | 1781164..1783047 | - | 1884 | WP_047172518.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| SXYL_RS08465 () | 1783569..1783817 | - | 249 | WP_029379025.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| SXYL_RS13490 () | 1784804..1784956 | - | 153 | WP_153227674.1 | hypothetical protein | - |
| - () | 1785818..1785949 | + | 132 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1785818..1785949 | + | 132 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1785818..1785949 | + | 132 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1785818..1785949 | + | 132 | NuclAT_0 | - | Antitoxin Detail |
| SXYL_RS13295 () | 1785941..1786048 | - | 108 | WP_080892139.1 | putative holin-like toxin | Toxin Detail |
| SXYL_RS08475 () | 1786854..1787045 | - | 192 | WP_047172519.1 | hypothetical protein | - |
| SXYL_RS08480 () | 1787391..1787801 | - | 411 | WP_047172520.1 | YolD-like family protein | - |
| SXYL_RS08485 () | 1787948..1788310 | - | 363 | WP_047173057.1 | protein-export chaperone SecB | - |
| SXYL_RS08490 () | 1788349..1788708 | - | 360 | WP_047172521.1 | hypothetical protein | - |
| SXYL_RS08495 () | 1788715..1789287 | - | 573 | WP_047172522.1 | hypothetical protein | - |
| SXYL_RS08500 () | 1789814..1791082 | - | 1269 | WP_080892140.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SXYL_RS08505 () | 1791229..1792155 | - | 927 | WP_047172523.1 | zinc-ribbon domain-containing protein | - |
| SXYL_RS08510 () | 1792472..1792759 | - | 288 | WP_047172524.1 | phage holin | - |
| SXYL_RS08515 () | 1792881..1793276 | - | 396 | WP_038678574.1 | hypothetical protein | - |
| SXYL_RS08520 () | 1793263..1793685 | - | 423 | WP_038678576.1 | hypothetical protein | - |
| SXYL_RS13300 () | 1793723..1793875 | - | 153 | WP_080892141.1 | XkdX family protein | - |
| SXYL_RS08525 () | 1793877..1794215 | - | 339 | WP_047172525.1 | hypothetical protein | - |
| SXYL_RS13205 () | 1794228..1795952 | - | 1725 | WP_052671236.1 | BppU family phage baseplate upper protein | - |
| SXYL_RS08535 () | 1795972..1798539 | - | 2568 | WP_047173060.1 | peptidase G2 | - |
| SXYL_RS13530 () | 1798605..1798856 | - | 252 | WP_047172526.1 | hypothetical protein | - |
| SXYL_RS08545 () | 1798849..1800438 | - | 1590 | WP_144404246.1 | prophage endopeptidase tail family protein | - |
| SXYL_RS08550 () | 1800448..1801275 | - | 828 | WP_080892142.1 | phage tail family protein | - |
| SXYL_RS13305 () | 1801277..1805953 | - | 4677 | WP_080892143.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| SXYL_RS08570 () | 1806166..1806528 | - | 363 | WP_029376957.1 | hypothetical protein | - |
| SXYL_RS08575 () | 1806605..1806790 | - | 186 | WP_029376956.1 | hypothetical protein | - |
| SXYL_RS08580 () | 1806809..1807438 | - | 630 | WP_047172527.1 | phage tail protein | - |
| SXYL_RS08585 () | 1807451..1807855 | - | 405 | WP_029376954.1 | hypothetical protein | - |
| SXYL_RS08590 () | 1807858..1808262 | - | 405 | WP_047172528.1 | hypothetical protein | - |
| SXYL_RS08595 () | 1808259..1808588 | - | 330 | WP_047172529.1 | hypothetical protein | - |
| SXYL_RS08600 () | 1808578..1808919 | - | 342 | WP_047172530.1 | head-tail connector protein | - |
| SXYL_RS08605 () | 1808938..1810269 | - | 1332 | WP_047172531.1 | phage major capsid protein | - |
| SXYL_RS08610 () | 1810310..1810873 | - | 564 | WP_029376949.1 | HK97 family phage prohead protease | - |
| SXYL_RS08615 () | 1810866..1812095 | - | 1230 | WP_029376948.1 | phage portal protein | - |
| SXYL_RS08620 () | 1812095..1812286 | - | 192 | WP_047172532.1 | hypothetical protein | - |
| SXYL_RS08625 () | 1812298..1814049 | - | 1752 | WP_047172533.1 | terminase large subunit | - |
| SXYL_RS08630 () | 1814042..1814527 | - | 486 | WP_029376945.1 | phage terminase small subunit P27 family | - |
| SXYL_RS08635 () | 1814688..1815038 | - | 351 | WP_047172534.1 | HNH endonuclease | - |
| SXYL_RS08640 () | 1815607..1816053 | - | 447 | WP_029376943.1 | transcriptional regulator | - |
| SXYL_RS08645 () | 1816067..1816294 | - | 228 | WP_144404236.1 | DUF1514 family protein | - |
| SXYL_RS08650 () | 1816291..1816554 | - | 264 | WP_047172536.1 | hypothetical protein | - |
| SXYL_RS13495 () | 1816556..1816723 | - | 168 | WP_153227676.1 | hypothetical protein | - |
| SXYL_RS13410 () | 1816729..1816857 | - | 129 | WP_144404237.1 | transcriptional regulator | - |
| SXYL_RS08655 () | 1816877..1817134 | - | 258 | WP_047172537.1 | DUF1381 domain-containing protein | - |
| SXYL_RS08660 () | 1817173..1817484 | - | 312 | WP_047172538.1 | MazG-like family protein | - |
| SXYL_RS08665 () | 1817477..1817689 | - | 213 | WP_047172539.1 | hypothetical protein | - |
| SXYL_RS08670 () | 1817861..1818271 | - | 411 | WP_047172540.1 | hypothetical protein | - |
| SXYL_RS08675 () | 1818268..1818426 | - | 159 | WP_161793166.1 | hypothetical protein | - |
| SXYL_RS08680 () | 1818474..1819067 | - | 594 | WP_047172542.1 | HNH endonuclease | - |
| SXYL_RS08685 () | 1819069..1819305 | - | 237 | WP_029376933.1 | hypothetical protein | - |
| SXYL_RS08690 () | 1819286..1819492 | - | 207 | WP_047172543.1 | hypothetical protein | - |
| SXYL_RS08695 () | 1819493..1819846 | - | 354 | WP_052671238.1 | hypothetical protein | - |
| SXYL_RS08700 () | 1819860..1820069 | - | 210 | WP_029376930.1 | hypothetical protein | - |
| SXYL_RS08705 () | 1820062..1820472 | - | 411 | WP_047172544.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SXYL_RS08710 () | 1820483..1820695 | - | 213 | WP_029376928.1 | hypothetical protein | - |
| SXYL_RS13565 () | 1820696..1820857 | - | 162 | WP_047172545.1 | hypothetical protein | - |
| SXYL_RS08720 () | 1820851..1821624 | - | 774 | WP_047172546.1 | IS21 family transposase ISRme9 | Transposase |
| SXYL_RS08725 () | 1821635..1822402 | - | 768 | WP_047172547.1 | DnaD domain protein | - |
| SXYL_RS08730 () | 1822389..1823069 | - | 681 | WP_047172548.1 | hypothetical protein | - |
| SXYL_RS08735 () | 1823083..1823511 | - | 429 | WP_047172549.1 | single-stranded DNA-binding protein | - |
| SXYL_RS08740 () | 1823514..1824161 | - | 648 | WP_047172550.1 | ERF family protein | - |
| SXYL_RS08745 () | 1824154..1824378 | - | 225 | WP_047172551.1 | DUF2483 family protein | - |
| SXYL_RS08750 () | 1824344..1824628 | - | 285 | WP_047172552.1 | hypothetical protein | - |
| SXYL_RS08755 () | 1824693..1824872 | - | 180 | WP_047172553.1 | hypothetical protein | - |
| SXYL_RS08760 () | 1824885..1825094 | - | 210 | WP_047172554.1 | hypothetical protein | - |
| SXYL_RS08765 () | 1825107..1825847 | - | 741 | WP_047172555.1 | phage antirepressor KilAC domain-containing protein | - |
| SXYL_RS08770 () | 1825981..1826181 | - | 201 | WP_047172556.1 | helix-turn-helix domain-containing protein | - |
| SXYL_RS08775 () | 1826391..1826690 | + | 300 | WP_047172557.1 | helix-turn-helix domain-containing protein | - |
| SXYL_RS08780 () | 1826712..1827200 | + | 489 | WP_047172558.1 | ImmA/IrrE family metallo-endopeptidase | - |
| SXYL_RS13210 () | 1827288..1828091 | + | 804 | WP_052671239.1 | hypothetical protein | - |
| SXYL_RS08790 () | 1828153..1829199 | + | 1047 | WP_047172559.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SXYL_RS08800 () | 1829645..1830154 | - | 510 | WP_042362896.1 | metallophosphoesterase | - |
| SXYL_RS08805 () | 1830154..1830735 | - | 582 | WP_047172560.1 | XTP/dITP diphosphatase | - |
| SXYL_RS08810 () | 1830747..1831547 | - | 801 | WP_047172561.1 | glutamate racemase | - |
| SXYL_RS08815 () | 1831755..1832567 | - | 813 | WP_029379029.1 | succinate dehydrogenase iron-sulfur subunit | - |
| SXYL_RS08820 () | 1832570..1834333 | - | 1764 | WP_042362898.1 | succinate dehydrogenase flavoprotein subunit | - |
| SXYL_RS08825 () | 1834379..1834990 | - | 612 | WP_047172562.1 | succinate dehydrogenase cytochrome b558 subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|