MGE detailed information
MGE type: Prophage MGE length: 12880 bp
Accession: NZ_LM995446 Location: 4473722..4486601 Organism: Escherichia coli strain K-12 substr. RV308 Replicon: chromosome
Accession: NZ_LM995446 Location: 4473722..4486601 Organism: Escherichia coli strain K-12 substr. RV308 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRV308_RS22065 () | 4469298..4470080 | - | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| ECRV308_RS22070 () | 4470097..4470729 | - | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| ECRV308_RS22075 () | 4470741..4471172 | - | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| ECRV308_RS22080 () | 4471303..4472109 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| ECRV308_RS22085 () | 4472122..4473435 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| ECRV308_RS22090 () | 4473447..4473725 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ECRV308_RS22095 () | 4473722..4474843 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| ECRV308_RS25765 () | 4475088..4475204 | - | 117 | Protein_4181 | VOC family protein | - |
| ECRV308_RS25095 () | 4475242..4475460 | - | 219 | Protein_4182 | hypothetical protein | - |
| ECRV308_RS22100 () | 4475629..4476375 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| ECRV308_RS22105 () | 4476431..4476976 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| ECRV308_RS22110 () | 4476988..4477245 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| ECRV308_RS25555 () | 4477622..4477867 | - | 246 | Protein_4186 | GNAT family N-acetyltransferase | - |
| ECRV308_RS22125 () | 4477983..4479223 | + | 1241 | Protein_4187 | helicase YjhR | - |
| ECRV308_RS22130 () | 4479806..4480786 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ECRV308_RS22135 () | 4480851..4481957 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| ECRV308_RS22140 () | 4481977..4482693 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ECRV308_RS22155 () | 4484149..4484751 | + | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| ECRV308_RS22160 () | 4485297..4485994 | + | 698 | Protein_4192 | IS1 family transposase IS1A | Transposase |
| ECRV308_RS22165 () | 4485987..4486601 | + | 615 | WP_038404959.1 | Tyrosine recombinase XerD | VF |
| ECRV308_RS22175 () | 4487083..4487631 | + | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| ECRV308_RS22180 () | 4487696..4488235 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| ECRV308_RS22185 () | 4488272..4488997 | + | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|