MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_LM993812 Location: 3220234..3241165 Organism: Escherichia coli strain K-12 substr. HMS174 Replicon: chromosome
Accession: NZ_LM993812 Location: 3220234..3241165 Organism: Escherichia coli strain K-12 substr. HMS174 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECHMS174_RS15905 () | 3216066..3217397 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| ECHMS174_RS15910 () | 3217419..3218408 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| ECHMS174_RS15915 () | 3218507..3219445 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| ECHMS174_RS25785 () | 3219760..3219978 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| ECHMS174_RS15925 () | 3220234..3220773 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| ECHMS174_RS15930 () | 3220795..3221982 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| ECHMS174_RS15935 () | 3223005..3224150 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| ECHMS174_RS15940 () | 3224247..3225137 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| ECHMS174_RS15945 () | 3225167..3225937 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| ECHMS174_RS15950 () | 3225953..3227287 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| ECHMS174_RS15955 () | 3227662..3229233 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| ECHMS174_RS15960 () | 3229382..3229717 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| ECHMS174_RS15965 () | 3229717..3230181 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| ECHMS174_RS15970 () | 3230236..3231045 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| ECHMS174_RS15975 () | 3231294..3232574 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| ECHMS174_RS15980 () | 3232597..3233070 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| ECHMS174_RS15985 () | 3233081..3233452 | + | 372 | Protein_3047 | PTS sugar transporter subunit IIC | - |
| ECHMS174_RS15990 () | 3233448..3234005 | + | 558 | Protein_3048 | amidohydrolase family protein | - |
| ECHMS174_RS15995 () | 3234356..3235510 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| ECHMS174_RS16000 () | 3235523..3236383 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| ECHMS174_RS16005 () | 3236550..3237026 | + | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| ECHMS174_RS16010 () | 3237065..3237868 | + | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| ECHMS174_RS16015 () | 3237858..3238649 | + | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| ECHMS174_RS16020 () | 3238650..3239405 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| ECHMS174_RS16025 () | 3239806..3240390 | + | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| ECHMS174_RS16030 () | 3240470..3241165 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| ECHMS174_RS16035 () | 3241194..3243710 | + | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| ECHMS174_RS16040 () | 3243721..3244812 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| ECHMS174_RS16045 () | 3244855..3245715 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|