MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 53206 bp
Accession: NZ_KR071788 Location: 1..53206 Organism: Xanthomonas oryzae pv. oryzicola strain GX01 Replicon: plasmid pXOCgx01
Accession: NZ_KR071788 Location: 1..53206 Organism: Xanthomonas oryzae pv. oryzicola strain GX01 Replicon: plasmid pXOCgx01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XOCgx_RS22800 () | 269..955 | + | 687 | WP_048485090.1 | hypothetical protein | - |
| XOCgx_RS22810 () | 1881..2585 | + | 705 | WP_048485091.1 | DNA-binding protein | - |
| XOCgx_RS22815 () | 2709..3347 | + | 639 | WP_047340389.1 | AAA family ATPase | - |
| XOCgx_RS22820 () | 3344..3679 | + | 336 | WP_048485092.1 | hypothetical protein | - |
| XOCgx_RS22830 () | 3942..4133 | + | 192 | WP_047340391.1 | hypothetical protein | - |
| XOCgx_RS22835 () | 4295..4501 | + | 207 | WP_047340392.1 | hypothetical protein | - |
| XOCgx_RS22840 () | 5013..5321 | + | 309 | WP_113224197.1 | CcgAII protein | - |
| XOCgx_RS22845 () | 5527..5862 | + | 336 | WP_075243222.1 | hypothetical protein | - |
| XOCgx_RS22855 () | 6403..6756 | - | 354 | WP_048485065.1 | hypothetical protein | - |
| XOCgx_RS22860 () | 6805..7512 | - | 708 | WP_048485066.1 | hypothetical protein | - |
| XOCgx_RS22865 () | 7509..7955 | - | 447 | WP_150411547.1 | conjugal transfer protein TraD | - |
| XOCgx_RS22870 () | 8305..8700 | + | 396 | WP_150411548.1 | conjugal transfer protein TraA | - |
| XOCgx_RS22875 () | 8877..10451 | + | 1575 | WP_150411549.1 | type IV secretion system DNA-binding domain-containing protein | - |
| XOCgx_RS22880 () | 10465..13425 | + | 2961 | WP_048485071.1 | Multifunctional conjugation protein TraI | Relaxase |
| XOCgx_RS22885 () | 13494..13820 | - | 327 | WP_193566048.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| XOCgx_RS22890 () | 13817..14035 | - | 219 | WP_048485072.1 | antitoxin MazE family protein | Antitoxin Detail |
| XOCgx_RS22895 () | 14254..14673 | - | 420 | WP_048485073.1 | hypothetical protein | - |
| XOCgx_RS22900 () | 14799..15707 | - | 909 | WP_048485074.1 | Type IV secretion system protein virB1 | VF |
| XOCgx_RS22905 () | 15694..16716 | - | 1023 | WP_048485075.1 | Type IV secretion system protein VirB11 | VF |
| XOCgx_RS22910 () | 16727..17947 | - | 1221 | WP_048485076.1 | TrbI/VirB10 family protein | - |
| XOCgx_RS22915 () | 17949..18731 | - | 783 | WP_075244577.1 | Type IV secretion system protein virB9 | VF |
| XOCgx_RS22920 () | 18756..19430 | - | 675 | WP_047340364.1 | type IV secretion system protein | - |
| XOCgx_RS22925 () | 19427..20293 | - | 867 | WP_047340363.1 | type IV secretion system protein | - |
| XOCgx_RS22930 () | 20281..20688 | - | 408 | WP_047340362.1 | hypothetical protein | - |
| XOCgx_RS22935 () | 20681..20893 | - | 213 | WP_017174006.1 | hypothetical protein | - |
| XOCgx_RS22940 () | 20945..21610 | - | 666 | WP_117231651.1 | hypothetical protein | - |
| XOCgx_RS22945 () | 21607..24240 | - | 2634 | WP_047340360.1 | Type IV secretion system protein virB4 | VF |
| XOCgx_RS22950 () | 24263..24562 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| XOCgx_RS22955 () | 24559..24936 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| XOCgx_RS22960 () | 24957..25247 | - | 291 | WP_047340585.1 | hypothetical protein | - |
| XOCgx_RS22970 () | 26307..26690 | + | 384 | WP_075244581.1 | hypothetical protein | - |
| XOCgx_RS22975 () | 27257..27907 | + | 651 | WP_048485085.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| XOCgx_RS22980 () | 27983..28336 | + | 354 | WP_150411568.1 | hypothetical protein | - |
| XOCgx_RS22990 () | 28611..29117 | + | 507 | WP_150411551.1 | hypothetical protein | - |
| XOCgx_RS23345 () | 29191..29358 | + | 168 | WP_162527344.1 | hypothetical protein | - |
| XOCgx_RS23235 () | 29588..29878 | - | 291 | WP_161600056.1 | hypothetical protein | - |
| XOCgx_RS23000 () | 29937..30200 | - | 264 | WP_048485088.1 | hypothetical protein | - |
| XOCgx_RS23010 () | 30537..30860 | + | 324 | WP_117231657.1 | hypothetical protein | - |
| XOCgx_RS23015 () | 31762..32130 | + | 369 | WP_150411553.1 | hypothetical protein | - |
| XOCgx_RS23020 () | 32220..33470 | + | 1251 | WP_150411554.1 | TolC family protein | - |
| XOCgx_RS23025 () | 33467..34708 | + | 1242 | WP_150411555.1 | efflux RND transporter periplasmic adaptor subunit | - |
| XOCgx_RS23030 () | 34718..37849 | + | 3132 | WP_150411556.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| XOCgx_RS23035 () | 37846..38577 | + | 732 | WP_150411557.1 | HupE/UreJ family protein | - |
| XOCgx_RS23040 () | 38592..39248 | + | 657 | WP_150411558.1 | hypothetical protein | - |
| XOCgx_RS23045 () | 39310..39534 | + | 225 | WP_150411559.1 | hypothetical protein | - |
| XOCgx_RS23050 () | 39613..40947 | + | 1335 | WP_150411560.1 | MFS transporter | - |
| XOCgx_RS23060 () | 41210..41836 | - | 627 | WP_150411561.1 | SEC-C domain-containing protein | - |
| XOCgx_RS23065 () | 41883..42935 | - | 1053 | WP_150411562.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| XOCgx_RS23070 () | 43209..44789 | + | 1581 | WP_150411563.1 | AAA family ATPase | - |
| XOCgx_RS23075 () | 44767..45864 | + | 1098 | WP_150411564.1 | AAA family ATPase | - |
| XOCgx_RS23080 () | 45903..46844 | + | 942 | Protein_50 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| XOCgx_RS23085 () | 46881..49841 | + | 2961 | WP_076611205.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| XOCgx_RS23090 () | 50402..50800 | + | 399 | WP_150411565.1 | hypothetical protein | - |
| XOCgx_RS23095 () | 50827..51067 | + | 241 | Protein_53 | hypothetical protein | - |
| XOCgx_RS23100 () | 51064..51303 | + | 240 | WP_047340383.1 | hypothetical protein | - |
| XOCgx_RS23105 () | 51319..51912 | + | 594 | WP_150411566.1 | hypothetical protein | - |
| XOCgx_RS23110 () | 51991..52335 | + | 345 | WP_047340385.1 | hypothetical protein | - |
| XOCgx_RS23115 () | 52419..53003 | + | 585 | WP_150411567.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|