MGE detailed information
MGE type: Prophage MGE length: 43614 bp
Accession: NZ_JPPU01000009 Location: 323..43936 Organism: Staphylococcus aureus strain HG003 isolate RN1 Scaffold_9 Replicon: chromosome
Accession: NZ_JPPU01000009 Location: 323..43936 Organism: Staphylococcus aureus strain HG003 isolate RN1 Scaffold_9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IM26_RS0114270 | 1..119 | - | 119 | WP_031926752.1 | hypothetical protein | - |
| IM26_RS21100 (IM26_06135) | 323..664 | - | 342 | WP_000591749.1 | hypothetical protein | - |
| IM26_RS21105 (IM26_06140) | 670..1602 | - | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| IM26_RS21110 (IM26_06145) | 1618..2331 | - | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| IM26_RS0114275 | 2294..2467 | + | 174 | WP_001801500.1 | hypothetical protein | - |
| IM26_RS21115 (IM26_06150) | 2464..2727 | + | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| IM26_RS21120 (IM26_06155) | 2743..2988 | + | 246 | WP_001025402.1 | DUF2829 domain-containing protein | Toxin Detail |
| IM26_RS21125 (IM26_06160) | 2957..3322 | - | 366 | WP_001131647.1 | hypothetical protein | Antitoxin Detail |
| IM26_RS21130 (IM26_06165) | 3377..3592 | + | 216 | WP_001097552.1 | hypothetical protein | - |
| IM26_RS21135 (IM26_06170) | 3617..3880 | + | 264 | WP_001124160.1 | helix-turn-helix domain-containing protein | - |
| IM26_RS0114280 | 3893..4054 | + | 162 | WP_001285961.1 | DUF1270 domain-containing protein | - |
| IM26_RS21140 (IM26_06180) | 4133..4456 | + | 324 | WP_000174996.1 | hypothetical protein | - |
| IM26_RS21145 (IM26_06185) | 4471..4833 | + | 363 | WP_000279452.1 | hypothetical protein | - |
| IM26_RS21150 (IM26_06190) | 4830..5996 | + | 1167 | WP_000762540.1 | DUF2800 domain-containing protein | - |
| IM26_RS21155 (IM26_06195) | 6022..6579 | + | 558 | WP_000645042.1 | DUF2815 family protein | - |
| IM26_RS21160 (IM26_06200) | 6648..8600 | + | 1953 | WP_001796208.1 | DNA polymerase | - |
| IM26_RS21165 (IM26_06205) | 8613..8798 | + | 186 | WP_001164629.1 | DUF3113 family protein | - |
| IM26_RS21170 (IM26_06210) | 8798..9199 | + | 402 | WP_000113981.1 | PVL family protein | - |
| IM26_RS21175 (IM26_06215) | 9199..9456 | + | 258 | WP_000111489.1 | DUF3310 domain-containing protein | - |
| IM26_RS21180 (IM26_06220) | 9459..9659 | + | 201 | WP_000235381.1 | hypothetical protein | - |
| IM26_RS21185 (IM26_06225) | 9668..9916 | + | 249 | WP_015968801.1 | phi PVL orf 51-like protein | - |
| IM26_RS21190 (IM26_06230) | 9930..10136 | + | 207 | WP_000693987.1 | hypothetical protein | - |
| IM26_RS21195 (IM26_06235) | 10139..10540 | + | 402 | WP_000695759.1 | hypothetical protein | - |
| IM26_RS21200 (IM26_06240) | 10537..10884 | + | 348 | WP_000979209.1 | YopX family protein | - |
| IM26_RS21205 (IM26_06245) | 10881..11189 | + | 309 | WP_000144708.1 | hypothetical protein | - |
| IM26_RS21210 (IM26_06250) | 11182..11418 | + | 237 | WP_001065023.1 | DUF1024 family protein | - |
| IM26_RS21215 (IM26_06255) | 11423..11965 | + | 543 | WP_000185654.1 | dUTP pyrophosphatase | - |
| IM26_RS21220 (IM26_06260) | 12002..12190 | + | 189 | WP_000195837.1 | DUF1381 domain-containing protein | - |
| IM26_RS21225 (IM26_06265) | 12165..12365 | + | 201 | WP_001125015.1 | hypothetical protein | - |
| IM26_RS21230 (IM26_06270) | 12368..12520 | + | 153 | WP_000237866.1 | transcriptional activator RinB | - |
| IM26_RS21235 (IM26_06275) | 12588..12788 | + | 201 | WP_000265258.1 | DUF1514 family protein | - |
| IM26_RS21240 (IM26_06280) | 12840..15287 | + | 2448 | WP_000884854.1 | virulence-associated E family protein | - |
| IM26_RS0114285 | 15390..15494 | - | 105 | WP_011447017.1 | hypothetical protein | - |
| IM26_RS21245 (IM26_06285) | 15628..15918 | + | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| IM26_RS21250 (IM26_06290) | 15899..17266 | + | 1368 | WP_001795330.1 | DEAD/DEAH box helicase | - |
| IM26_RS21255 (IM26_06295) | 17279..17716 | + | 438 | WP_000513703.1 | transcriptional regulator | - |
| IM26_RS21260 (IM26_06300) | 17873..18187 | + | 315 | WP_000160683.1 | HNH endonuclease | - |
| IM26_RS21265 (IM26_06305) | 18309..18614 | + | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| IM26_RS21270 (IM26_06310) | 18604..20295 | + | 1692 | WP_000153543.1 | terminase large subunit | - |
| IM26_RS21275 (IM26_06315) | 20300..21538 | + | 1239 | WP_001100665.1 | phage portal protein | - |
| IM26_RS21280 (IM26_06320) | 21522..22295 | + | 774 | WP_000061866.1 | Clp protease ClpP | - |
| IM26_RS21285 (IM26_06325) | 22307..23470 | + | 1164 | WP_001142734.1 | phage major capsid protein | - |
| IM26_RS21290 (IM26_06330) | 23539..23817 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| IM26_RS21295 (IM26_06335) | 23829..24161 | + | 333 | WP_000395498.1 | hypothetical protein | - |
| IM26_RS21300 (IM26_06340) | 24158..24559 | + | 402 | WP_000110023.1 | hypothetical protein | - |
| IM26_RS21305 (IM26_06345) | 24560..24955 | + | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| IM26_RS21310 (IM26_06350) | 24990..25631 | + | 642 | WP_000807536.1 | phage tail protein | - |
| IM26_RS21315 (IM26_06360) | 25723..26178 | + | 456 | WP_000169128.1 | Ig-like domain-containing protein | - |
| IM26_RS21320 (IM26_06365) | 26236..26586 | + | 351 | WP_000589167.1 | hypothetical protein | - |
| IM26_RS0114290 | 26628..26786 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| IM26_RS21325 (IM26_06375) | 26800..33000 | + | 6201 | WP_001003443.1 | phage tail tape measure protein | - |
| IM26_RS21330 (IM26_06380) | 33000..33824 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| IM26_RS21335 (IM26_06385) | 33833..35416 | + | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| IM26_RS21340 (IM26_06390) | 35416..35706 | + | 291 | WP_000179862.1 | hypothetical protein | - |
| IM26_RS21345 (IM26_06395) | 35722..37632 | + | 1911 | WP_000429551.1 | minor structural protein | - |
| IM26_RS21350 (IM26_06400) | 37632..39098 | + | 1467 | WP_000067148.1 | BppU family phage baseplate upper protein | - |
| IM26_RS21355 (IM26_06405) | 39098..39487 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| IM26_RS0114295 | 39480..39644 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| IM26_RS21360 (IM26_06415) | 39690..39989 | + | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| IM26_RS21365 (IM26_06420) | 40125..40427 | + | 303 | WP_000339144.1 | phage holin | - |
| IM26_RS21370 (IM26_06425) | 40438..41892 | + | 1455 | WP_000909202.1 | N-acetylmuramoyl-L-alanine amidase | - |
| IM26_RS21375 (IM26_06435) | 42508..43344 | + | 837 | WP_000675478.1 | hypothetical protein | - |
| IM26_RS29165 (IM26_06445) | 43721..43936 | + | 216 | WP_170267452.1 | hypothetical protein | - |
| IM26_RS21385 (IM26_06450) | 44027..44944 | + | 918 | WP_000476873.1 | DUF1672 domain-containing protein | - |
| IM26_RS21390 (IM26_06455) | 45002..45952 | + | 951 | WP_000472939.1 | DUF1672 domain-containing protein | - |
| IM26_RS29245 | 45945..46070 | + | 126 | Protein_65 | hypothetical protein | - |
| IM26_RS21400 (IM26_06465) | 46166..47080 | + | 915 | WP_000913219.1 | DUF1672 domain-containing protein | - |
| IM26_RS0114315 | 47279..47398 | + | 120 | WP_001789947.1 | hypothetical protein | - |
| IM26_RS21405 (IM26_06470) | 47677..48222 | + | 546 | WP_001186912.1 | ECF transporter S component | - |
| IM26_RS21410 (IM26_06475) | 48328..48576 | - | 249 | WP_001151997.1 | ferredoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|