MGE detailed information
MGE type: Genomic_island MGE length: 76674 bp
Accession: NZ_HG994851 Location: 3790946..3867619 Organism: Escherichia coli isolate 127 Replicon: chromosome
Accession: NZ_HG994851 Location: 3790946..3867619 Organism: Escherichia coli isolate 127 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLO82_RS18275 (3786103) | 3786103..3786690 | + | 588 | WP_001298544.1 | transcriptional regulator BetI | - |
| LLO82_RS18280 (3786704) | 3786704..3788176 | + | 1473 | WP_000089053.1 | betaine-aldehyde dehydrogenase | - |
| LLO82_RS18285 (3788190) | 3788190..3789860 | + | 1671 | WP_001159127.1 | choline dehydrogenase | - |
| LLO82_RS18290 (3790946) | 3790946..3791509 | + | 564 | WP_001335180.1 | ISKra4 family transposase ISCep1 | VF |
| LLO82_RS18295 (3791839) | 3791839..3792633 | + | 795 | WP_001335181.1 | LuxR family transcriptional regulator HyxR | - |
| LLO82_RS18300 (3792787) | 3792787..3793548 | + | 762 | WP_001213042.1 | protein HyxA | - |
| LLO82_RS24835 (3793590) | 3793590..3795887 | + | 2298 | WP_000798055.1 | outer membrane autotransporter HyxB | - |
| LLO82_RS18315 (3796071) | 3796071..3796739 | + | 669 | WP_001005267.1 | protein YkgH | - |
| LLO82_RS18320 (3796982) | 3796982..3797677 | - | 696 | WP_001298555.1 | lactate utilization protein C | - |
| LLO82_RS18325 (3797670) | 3797670..3799097 | - | 1428 | WP_000023923.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| LLO82_RS18330 (3799108) | 3799108..3799827 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| LLO82_RS18335 (3800354) | 3800354..3801208 | - | 855 | WP_000339603.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| LLO82_RS18340 (3801435) | 3801435..3802760 | + | 1326 | WP_001046335.1 | reactive chlorine resistance oxidoreductase RclA | - |
| LLO82_RS18345 (3802869) | 3802869..3803105 | + | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| LLO82_RS18350 (3803117) | 3803117..3803710 | + | 594 | WP_001298546.1 | reactive chlorine species resistance protein RclC | - |
| LLO82_RS18355 (3803870) | 3803870..3804739 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| LLO82_RS18360 (3804987) | 3804987..3805844 | + | 858 | WP_000620997.1 | Right origin-binding protein | VF |
| LLO82_RS18365 (3805969) | 3805969..3810216 | - | 4248 | WP_000092548.1 | hypothetical protein | VF |
| LLO82_RS18370 (3810782) | 3810782..3811633 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| LLO82_RS18375 (3811660) | 3811660..3812649 | + | 990 | WP_001172293.1 | aldo/keto reductase | - |
| LLO82_RS18380 (3812680) | 3812680..3813573 | - | 894 | WP_000910711.1 | HTH-type transcriptional regulator PgrR | VF |
| LLO82_RS18385 (3813773) | 3813773..3814699 | - | 927 | WP_001304867.1 | HTH-type transcriptional regulator PgrR | VF |
| LLO82_RS18390 (3814856) | 3814856..3815776 | + | 921 | WP_000860032.1 | alpha/beta hydrolase | - |
| LLO82_RS18395 (3815948) | 3815948..3817090 | + | 1143 | WP_000182341.1 | NADH-dependent flavin oxidoreductase | - |
| LLO82_RS18400 (3817563) | 3817563..3817664 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| LLO82_RS18405 (3818029) | 3818029..3818292 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| LLO82_RS18410 (3818292) | 3818292..3818432 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| LLO82_RS18415 (3818467) | 3818467..3818692 | - | 226 | Protein_3609 | protein YkgL | - |
| LLO82_RS18420 (3819516) | 3819516..3820058 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| LLO82_RS18425 (3820149) | 3820149..3820721 | + | 573 | WP_042856856.1 | Common pilus major fimbrillin subunit EcpA | VF |
| LLO82_RS18430 (3820778) | 3820778..3821446 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| LLO82_RS18435 (3821472) | 3821472..3823997 | + | 2526 | WP_001131116.1 | putative outer membrane usher protein EcpC | VF |
| LLO82_RS18440 (3823987) | 3823987..3825630 | + | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| LLO82_RS18445 (3825599) | 3825599..3826309 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| LLO82_RS18450 (3826616) | 3826616..3826945 | + | 330 | WP_001335188.1 | YkgJ family cysteine cluster protein | - |
| LLO82_RS18455 (3826957) | 3826957..3827123 | - | 167 | Protein_3617 | tail fiber assembly protein | - |
| LLO82_RS18460 (3827194) | 3827194..3827808 | - | 615 | WP_001019923.1 | YagU family protein | - |
| LLO82_RS18465 (3828023) | 3828023..3828208 | - | 186 | WP_000146243.1 | hypothetical protein | - |
| LLO82_RS18470 (3828257) | 3828257..3828415 | + | 159 | Protein_3620 | integrase | - |
| LLO82_RS18475 (3828632) | 3828632..3829325 | - | 694 | Protein_3621 | IS1 family transposase | - |
| LLO82_RS18480 (3829918) | 3829918..3834048 | + | 4131 | WP_001034003.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| LLO82_RS18485 (3834204) | 3834204..3834698 | + | 495 | WP_001059463.1 | Transcriptional repressor MprA | VF |
| LLO82_RS18490 (3835136) | 3835136..3835471 | - | 336 | Protein_3624 | Arm DNA-binding domain-containing protein | - |
| LLO82_RS18495 (3835837) | 3835837..3837156 | + | 1320 | WP_000144686.1 | Prophage integrase IntA ; Integrase | Integrase |
| LLO82_RS18500 (3837249) | 3837249..3838103 | - | 855 | WP_024174313.1 | DUF4942 domain-containing protein | - |
| LLO82_RS18505 (3838188) | 3838188..3838385 | - | 198 | WP_000839247.1 | DUF957 domain-containing protein | - |
| LLO82_RS18510 (3838397) | 3838397..3838885 | - | 489 | WP_000761726.1 | DUF5983 family protein | - |
| LLO82_RS18515 (3838882) | 3838882..3839259 | - | 378 | WP_000854700.1 | TA system toxin CbtA family protein | Toxin Detail |
| LLO82_RS18520 (3839349) | 3839349..3839717 | - | 369 | WP_001278232.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| LLO82_RS18525 (3839880) | 3839880..3840101 | - | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| LLO82_RS18530 (3840170) | 3840170..3840646 | - | 477 | WP_001186199.1 | RadC family protein | - |
| LLO82_RS18535 (3840662) | 3840662..3841147 | - | 486 | WP_000213723.1 | antirestriction protein | - |
| LLO82_RS18540 (3841239) | 3841239..3842057 | - | 819 | WP_001234709.1 | DUF932 domain-containing protein | - |
| LLO82_RS18545 (3842384) | 3842384..3845506 | - | 3123 | WP_202847272.1 | autotransporter adhesin Ag43 | - |
| LLO82_RS18550 (3845840) | 3845840..3846712 | - | 873 | WP_021538680.1 | GTPase family protein | - |
| LLO82_RS18555 (3847043) | 3847043..3847225 | + | 183 | WP_000282123.1 | hypothetical protein | - |
| LLO82_RS18560 (3847458) | 3847458..3847529 | - | 72 | Protein_3638 | IS66 family insertion sequence element accessory protein TnpB | - |
| LLO82_RS18565 (3847526) | 3847526..3847888 | - | 363 | WP_000229734.1 | IS66 family transposase ISEc23 | Transposase |
| LLO82_RS18570 (3848275) | 3848275..3849585 | + | 1311 | WP_000016482.1 | cadaverine/lysine antiporter | - |
| LLO82_RS18575 (3849616) | 3849616..3851742 | + | 2127 | WP_001092279.1 | lysine decarboxylase LdcC | - |
| LLO82_RS18580 (3851946) | 3851946..3852656 | + | 711 | WP_000215693.1 | helix-turn-helix domain-containing protein | - |
| LLO82_RS18585 (3852950) | 3852950..3854446 | + | 1497 | WP_001298165.1 | lysine--tRNA ligase | - |
| LLO82_RS18590 (3854493) | 3854493..3855380 | + | 888 | WP_001178453.1 | HTH-type transcriptional regulator ArgP | - |
| LLO82_RS18595 (3856167) | 3856167..3856529 | + | 363 | WP_000239761.1 | IS66 family transposase IS682 | Transposase |
| LLO82_RS18600 (3856526) | 3856526..3856873 | + | 348 | WP_000624593.1 | IS66 family transposase ISCro1 | Transposase |
| LLO82_RS18605 (3856893) | 3856893..3857492 | + | 600 | Protein_3647 | IS66 family transposase IS679 | Transposase |
| LLO82_RS18610 (3857561) | 3857561..3858343 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| LLO82_RS18615 (3858340) | 3858340..3858912 | - | 573 | Protein_3649 | IS21 family transposase IS100kyp | Transposase |
| LLO82_RS18620 (3858899) | 3858899..3859041 | - | 143 | Protein_3650 | IS110 family transposase | - |
| LLO82_RS18625 (3859102) | 3859102..3859287 | + | 186 | Protein_3651 | IS66 family transposase IS682 | Transposase |
| LLO82_RS18630 (3859394) | 3859394..3860593 | - | 1200 | WP_001298139.1 | GTP-binding protein | - |
| LLO82_RS18635 (3860857) | 3860857..3861648 | - | 792 | WP_000977398.1 | DUF4198 domain-containing protein | - |
| LLO82_RS18640 (3861667) | 3861667..3863637 | - | 1971 | WP_001445605.1 | Hemin receptor | VF |
| LLO82_RS18645 (3863983) | 3863983..3865346 | + | 1364 | Protein_3655 | IS4 family transposase ISEc13 | Transposase |
| LLO82_RS18655 (3865886) | 3865886..3866540 | - | 655 | Protein_3656 | hypothetical protein | - |
| LLO82_RS18660 (3867236) | 3867236..3867619 | + | 384 | Protein_3657 | IS4 family transposase IS4 | Transposase |
| LLO82_RS18665 (3867630) | 3867630..3867929 | - | 300 | WP_000805229.1 | hypothetical protein | - |
| LLO82_RS18670 (3868467) | 3868467..3869582 | + | 1116 | WP_001298145.1 | salmochelin biosynthesis C-glycosyltransferase IroB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|