MGE detailed information
MGE type: Genomic_island MGE length: 42227 bp
Accession: NZ_HG994850 Location: 3945989..3988215 Organism: Escherichia coli isolate 127 Replicon: chromosome
Accession: NZ_HG994850 Location: 3945989..3988215 Organism: Escherichia coli isolate 127 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLO83_RS18980 (3941354) | 3941354..3941812 | - | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| LLO83_RS18985 (3942073) | 3942073..3943530 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| LLO83_RS18990 (3943587) | 3943587..3944201 | - | 615 | WP_000602124.1 | peptide chain release factor H | - |
| LLO83_RS18995 (3944198) | 3944198..3945337 | - | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| LLO83_RS19000 (3945527) | 3945527..3945979 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| LLO83_RS19005 (3945989) | 3945989..3946387 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LLO83_RS19010 (3946390) | 3946390..3946683 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LLO83_RS19015 (3946735) | 3946735..3947790 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| LLO83_RS19020 (3947861) | 3947861..3948646 | - | 786 | WP_000207578.1 | Chemotaxis protein LafU | VF |
| LLO83_RS19025 (3948618) | 3948618..3950330 | + | 1713 | Protein_3729 | Flagellar biosynthesis protein FlhA | VF |
| LLO83_RS19030 (3950650) | 3950650..3951147 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| LLO83_RS19035 (3951323) | 3951323..3952072 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| LLO83_RS19040 (3952384) | 3952384..3953124 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LLO83_RS19045 (3953095) | 3953095..3953862 | - | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| LLO83_RS19050 (3954067) | 3954067..3954645 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| LLO83_RS19055 (3954885) | 3954885..3957329 | + | 2445 | WP_000973131.1 | Acyl-coenzyme A dehydrogenase | VF |
| LLO83_RS19060 (3957372) | 3957372..3957818 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| LLO83_RS19065 (3957999) | 3957999..3958769 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| LLO83_RS19070 (3958820) | 3958820..3959014 | - | 195 | Protein_3738 | ISAs1 family transposase | - |
| LLO83_RS19075 (3959040) | 3959040..3959528 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| LLO83_RS19085 (3960801) | 3960801..3961598 | + | 798 | WP_015059991.1 | Beta-lactamase OXA-10 | ARG |
| LLO83_RS19090 (3961900) | 3961900..3962811 | - | 912 | WP_015586033.1 | HTH-type transcriptional regulator DmlR | VF |
| LLO83_RS19095 (3963114) | 3963114..3964322 | + | 1209 | WP_001206290.1 | IS4 family transposase IS10A | Transposase |
| LLO83_RS19100 (3964335) | 3964335..3964562 | + | 228 | WP_023893608.1 | CPBP family intramembrane metalloprotease | - |
| LLO83_RS19105 (3964654) | 3964654..3964911 | + | 258 | WP_004187429.1 | type II toxin-antitoxin system antitoxin PemI | - |
| LLO83_RS19110 (3964880) | 3964880..3965245 | + | 366 | WP_020277900.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| LLO83_RS19115 (3965338) | 3965338..3965772 | + | 435 | WP_004187425.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LLO83_RS19120 (3965760) | 3965760..3967025 | + | 1266 | WP_019725070.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LLO83_RS19125 (3967148) | 3967148..3967357 | - | 210 | WP_004187413.1 | hypothetical protein | - |
| LLO83_RS19130 (3967360) | 3967360..3967578 | - | 219 | WP_004187411.1 | hypothetical protein | - |
| LLO83_RS19135 (3967623) | 3967623..3968306 | - | 684 | WP_015059994.1 | hypothetical protein | - |
| LLO83_RS19140 (3968303) | 3968303..3968575 | - | 273 | WP_015059995.1 | helix-turn-helix transcriptional regulator | - |
| LLO83_RS19145 (3968594) | 3968594..3969781 | - | 1188 | WP_015059996.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| LLO83_RS19150 (3970308) | 3970308..3970652 | + | 345 | WP_004187406.1 | hypothetical protein | - |
| LLO83_RS19155 (3970677) | 3970677..3970835 | + | 159 | WP_004187405.1 | hypothetical protein | - |
| LLO83_RS19160 (3970835) | 3970835..3971419 | + | 585 | WP_015059997.1 | hypothetical protein | - |
| LLO83_RS19165 (3971725) | 3971725..3972270 | - | 546 | WP_004187400.1 | hypothetical protein | - |
| LLO83_RS19170 (3972411) | 3972411..3972872 | + | 462 | WP_004187397.1 | hypothetical protein | - |
| LLO83_RS19175 (3972869) | 3972869..3973117 | + | 249 | WP_004187394.1 | helix-turn-helix transcriptional regulator | - |
| LLO83_RS19180 (3973110) | 3973110..3973697 | + | 588 | WP_004187392.1 | restriction endonuclease | - |
| LLO83_RS19185 (3973694) | 3973694..3974179 | + | 486 | WP_004187390.1 | hypothetical protein | - |
| LLO83_RS19190 (3974221) | 3974221..3974424 | + | 204 | WP_223216382.1 | hypothetical protein | - |
| LLO83_RS19195 (3974443) | 3974443..3975183 | + | 741 | WP_004187383.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LLO83_RS19200 (3975424) | 3975424..3976398 | + | 975 | WP_004187382.1 | plasmid segregation protein ParM | - |
| LLO83_RS19205 (3976401) | 3976401..3976844 | + | 444 | WP_004187380.1 | plasmid partitioning/stability family protein | - |
| LLO83_RS19210 (3976854) | 3976854..3977417 | + | 564 | WP_019725065.1 | hypothetical protein | VF |
| LLO83_RS19215 (3977535) | 3977535..3978041 | + | 507 | WP_004187377.1 | hypothetical protein | - |
| LLO83_RS19220 (3978034) | 3978034..3978513 | + | 480 | WP_004187375.1 | hypothetical protein | - |
| LLO83_RS19225 (3978542) | 3978542..3978952 | + | 411 | WP_004206907.1 | hypothetical protein | - |
| LLO83_RS19230 (3979070) | 3979070..3979333 | + | 264 | WP_004187372.1 | hypothetical protein | - |
| LLO83_RS19235 (3979355) | 3979355..3979717 | + | 363 | WP_004187371.1 | DUF3085 domain-containing protein | - |
| LLO83_RS19240 (3979839) | 3979839..3980288 | + | 450 | WP_004187369.1 | JAB domain-containing protein | - |
| LLO83_RS19245 (3980333) | 3980333..3980599 | + | 267 | WP_004187367.1 | helix-turn-helix transcriptional regulator | - |
| LLO83_RS19250 (3980663) | 3980663..3980986 | + | 324 | WP_019725063.1 | DGQHR domain-containing protein | - |
| LLO83_RS19260 (3981728) | 3981728..3981997 | - | 270 | WP_227431590.1 | hypothetical protein | - |
| LLO83_RS19265 (3982226) | 3982226..3982990 | - | 765 | Protein_3777 | ISAs1 family transposase | - |
| LLO83_RS19270 (3983248) | 3983248..3983538 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| LLO83_RS19275 (3983513) | 3983513..3984952 | - | 1440 | WP_000528851.1 | DUF4150 domain-containing protein | - |
| LLO83_RS19280 (3984945) | 3984945..3985991 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| LLO83_RS19285 (3986098) | 3986098..3988080 | - | 1983 | Protein_3781 | Actin cross-linking toxin VgrG1 | VF |
| LLO83_RS19290 (3988301) | 3988301..3988819 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| LLO83_RS19295 (3989525) | 3989525..3990028 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| LLO83_RS19300 (3990051) | 3990051..3991535 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| LLO83_RS19305 (3991540) | 3991540..3991965 | + | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|