MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 173013 bp
Accession: NZ_HG916826 Location: 4417566..4590578 Organism: Pseudomonas pseudoalcaligenes CECT 5344 strain CECT5344 Replicon: chromosome
Accession: NZ_HG916826 Location: 4417566..4590578 Organism: Pseudomonas pseudoalcaligenes CECT 5344 strain CECT5344 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BN5_RS20860 () | 4414497..4417478 | - | 2982 | WP_004425308.1 | virulence factor SrfB | - |
| BN5_RS20865 () | 4417548..4418888 | - | 1341 | WP_004425311.1 | hypothetical protein | - |
| BN5_RS20870 () | 4419125..4419529 | - | 405 | WP_004425315.1 | GFA family protein | - |
| BN5_RS20875 () | 4419547..4420503 | + | 957 | WP_169971459.1 | AEC family transporter | - |
| BN5_RS20880 () | 4420520..4421260 | - | 741 | WP_004425322.1 | transporter substrate-binding domain-containing protein | - |
| BN5_RS20885 () | 4421448..4422578 | + | 1131 | WP_004425326.1 | Twitching mobility protein | VF |
| BN5_RS20890 () | 4422601..4424109 | - | 1509 | WP_004425329.1 | hypothetical protein | - |
| BN5_RS20895 () | 4424378..4426936 | - | 2559 | WP_004425332.1 | TRAP transporter permease | - |
| BN5_RS20900 () | 4427086..4428057 | - | 972 | WP_004425336.1 | TAXI family TRAP transporter solute-binding subunit | - |
| BN5_RS22990 () | 4428229..4428800 | + | 572 | Protein_4164 | AraC family transcriptional regulator | - |
| BN5_RS20910 () | 4428812..4429150 | + | 339 | WP_039965424.1 | antibiotic biosynthesis monooxygenase | - |
| BN5_RS20915 () | 4429221..4429526 | + | 306 | WP_039965426.1 | hypothetical protein | - |
| BN5_RS20920 () | 4429685..4431937 | + | 2253 | WP_004425344.1 | hypothetical protein | VF |
| BN5_RS20925 () | 4431934..4433529 | + | 1596 | WP_004425347.1 | Aerotaxis receptor | VF |
| BN5_RS20930 () | 4433655..4434656 | + | 1002 | WP_004425351.1 | LLM class flavin-dependent oxidoreductase | - |
| BN5_RS20935 () | 4434919..4435341 | - | 423 | WP_004425353.1 | hypothetical protein | - |
| BN5_RS20940 () | 4435466..4436527 | + | 1062 | WP_004425357.1 | aminopeptidase | - |
| BN5_RS20945 () | 4436591..4436821 | + | 231 | WP_004425359.1 | DUF1161 domain-containing protein | - |
| BN5_RS20950 () | 4437100..4437747 | - | 648 | WP_004425362.1 | HAD family hydrolase | - |
| BN5_RS20955 () | 4437807..4438778 | - | 972 | WP_039965418.1 | hypothetical protein | - |
| BN5_RS20960 () | 4441710..4442678 | + | 969 | WP_004425364.1 | type I-F CRISPR-associated endonuclease Cas1 | - |
| BN5_RS20965 () | 4442675..4446025 | + | 3351 | WP_004425366.1 | type I-F CRISPR-associated helicase Cas3 | - |
| BN5_RS20970 () | 4446157..4447422 | - | 1266 | WP_004425368.1 | hypothetical protein | VF |
| BN5_RS20975 () | 4447422..4447763 | - | 342 | WP_004425370.1 | helix-turn-helix transcriptional regulator | - |
| BN5_RS20980 () | 4448054..4449352 | + | 1299 | WP_003459923.1 | IS1182 family transposase ISPst13 | Transposase |
| BN5_RS20985 () | 4449605..4450555 | + | 951 | Protein_4180 | IS1595 family transposase ISAchd1 | Transposase |
| BN5_RS20990 () | 4451107..4452468 | + | 1362 | WP_003464677.1 | type I-F CRISPR-associated protein Csy1 | - |
| BN5_RS20995 () | 4452461..4453462 | + | 1002 | WP_003464680.1 | type I-F CRISPR-associated protein Csy2 | - |
| BN5_RS21000 () | 4453468..4454487 | + | 1020 | WP_003464683.1 | type I-F CRISPR-associated protein Csy3 | - |
| BN5_RS21005 () | 4454490..4455053 | + | 564 | WP_003464685.1 | type I-F CRISPR-associated endoribonuclease Cas6/Csy4 | - |
| BN5_RS21010 () | 4457358..4457858 | - | 501 | WP_003464687.1 | GNAT family N-acetyltransferase | - |
| BN5_RS21015 () | 4457855..4458397 | - | 543 | WP_039965430.1 | Protein YrdA | VF |
| BN5_RS21020 () | 4458527..4460575 | + | 2049 | WP_003464691.1 | oligopeptidase A | - |
| BN5_RS21025 () | 4460572..4460865 | + | 294 | WP_003464693.1 | YheV family putative metal-binding protein | - |
| BN5_RS21030 () | 4460935..4461726 | - | 792 | WP_003464695.1 | HTH-type transcriptional regulator NimR | VF |
| BN5_RS21035 () | 4461808..4462794 | + | 987 | WP_003464696.1 | bile acid:sodium symporter | - |
| BN5_RS21040 () | 4462870..4463931 | + | 1062 | WP_003464698.1 | PA0069 family radical SAM protein | - |
| BN5_RS23540 () | 4464006..4464158 | + | 153 | Protein_4192 | carbohydrate kinase | - |
| BN5_RS21050 () | 4464298..4465026 | + | 729 | WP_003464702.1 | carbonic anhydrase | - |
| BN5_RS21055 () | 4465181..4465483 | - | 303 | WP_003464703.1 | hypothetical protein | - |
| BN5_RS21060 () | 4465485..4466426 | - | 942 | WP_003464705.1 | sodium-dependent bicarbonate transport family permease | - |
| BN5_RS21065 () | 4467015..4468826 | - | 1812 | WP_003464707.1 | sodium-extruding oxaloacetate decarboxylase subunit alpha | - |
| BN5_RS21070 () | 4468835..4470250 | - | 1416 | WP_003464708.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| BN5_RS21075 () | 4470420..4471379 | + | 960 | WP_197541243.1 | LysR family transcriptional regulator | - |
| BN5_RS21080 () | 4471451..4472638 | + | 1188 | WP_003464712.1 | XdhC family protein | - |
| BN5_RS21085 () | 4473460..4475697 | - | 2238 | WP_003464713.1 | xanthine dehydrogenase family protein molybdopterin-binding subunit | - |
| BN5_RS21090 () | 4475712..4476170 | - | 459 | WP_003464715.1 | (2Fe-2S)-binding protein | - |
| BN5_RS21095 () | 4476382..4476594 | - | 213 | WP_003464717.1 | hypothetical protein | - |
| BN5_RS21100 () | 4476689..4477555 | - | 867 | WP_003464720.1 | transcriptional regulator HexR | - |
| BN5_RS21105 () | 4477805..4479268 | + | 1464 | WP_172665332.1 | glucose-6-phosphate dehydrogenase | - |
| BN5_RS21110 () | 4479283..4480524 | - | 1242 | WP_003464725.1 | Anhydromuropeptide permease | VF |
| BN5_RS21115 () | 4480738..4481682 | - | 945 | WP_003464728.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| BN5_RS21120 () | 4481749..4482234 | + | 486 | WP_003464735.1 | transcriptional repressor | - |
| BN5_RS21125 () | 4482231..4483019 | + | 789 | WP_003464738.1 | Zinc import ATP-binding protein ZnuC | VF |
| BN5_RS21130 () | 4483019..4483807 | + | 789 | WP_003464741.1 | zinc ABC transporter permease subunit ZnuB | - |
| BN5_RS21135 () | 4483897..4484742 | + | 846 | WP_039965438.1 | hypothetical protein | - |
| BN5_RS21140 () | 4484915..4485922 | + | 1008 | WP_003464748.1 | Methionine import ATP-binding protein MetN | VF |
| BN5_RS21145 () | 4485922..4486590 | + | 669 | WP_003464751.1 | ABC transporter permease | - |
| BN5_RS21150 () | 4486655..4487425 | + | 771 | WP_003464754.1 | Membrane lipoprotein TpN32 | VF |
| BN5_RS21155 () | 4487545..4488399 | - | 855 | WP_003464756.1 | HTH-type transcriptional regulator YofA | VF |
| BN5_RS21160 () | 4488543..4488968 | + | 426 | WP_003464758.1 | VOC family protein | - |
| BN5_RS21165 () | 4489002..4491884 | - | 2883 | WP_039965441.1 | hypothetical protein | VF |
| BN5_RS21170 () | 4492174..4494357 | + | 2184 | WP_003464761.1 | DNA helicase II | - |
| BN5_RS21175 () | 4494381..4495475 | + | 1095 | WP_003464762.1 | TRAP transporter substrate-binding protein | - |
| BN5_RS21180 () | 4495710..4496792 | + | 1083 | WP_003464763.1 | TRAP transporter substrate-binding protein | - |
| BN5_RS21185 () | 4496967..4497548 | + | 582 | WP_003464764.1 | hypothetical protein | - |
| BN5_RS21190 () | 4497713..4498567 | + | 855 | WP_003464765.1 | hypothetical protein | - |
| BN5_RS21195 () | 4498846..4499316 | - | 471 | WP_003464766.1 | GNAT family N-acetyltransferase | - |
| BN5_RS21200 () | 4499422..4499829 | + | 408 | WP_003464767.1 | SMI1/KNR4 family protein | - |
| BN5_RS21205 () | 4499983..4500636 | - | 654 | WP_003464769.1 | GntR family transcriptional regulator | - |
| BN5_RS21210 () | 4500877..4502268 | + | 1392 | WP_039965443.1 | aspartate aminotransferase family protein | - |
| BN5_RS21215 () | 4502359..4503726 | + | 1368 | WP_003464771.1 | glutamine synthetase family protein | - |
| BN5_RS21220 () | 4503774..4505036 | - | 1263 | WP_003464772.1 | hypothetical protein | - |
| BN5_RS21225 () | 4505033..4505752 | - | 720 | WP_003464773.1 | hypothetical protein | - |
| BN5_RS21230 () | 4505837..4506334 | + | 498 | WP_003464774.1 | acyl-CoA thioesterase | - |
| BN5_RS21235 () | 4506325..4506699 | - | 375 | WP_003464775.1 | zf-TFIIB domain-containing protein | - |
| BN5_RS21240 () | 4506872..4507267 | + | 396 | WP_003464776.1 | DUF3301 domain-containing protein | - |
| BN5_RS21245 () | 4507363..4508241 | - | 879 | WP_003464779.1 | alpha/beta hydrolase | - |
| BN5_RS21250 () | 4508276..4509256 | - | 981 | WP_039965446.1 | GTP-binding protein | - |
| BN5_RS21255 () | 4509352..4509702 | + | 351 | WP_003464786.1 | hypothetical protein | - |
| BN5_RS21260 () | 4510025..4510669 | - | 645 | WP_003464791.1 | DUF1826 domain-containing protein | - |
| BN5_RS21265 () | 4510669..4511874 | - | 1206 | WP_003464793.1 | zinc metallochaperone GTPase ZigA | - |
| BN5_RS23000 () | 4511890..4512000 | - | 111 | Protein_4237 | TraR/DksA C4-type zinc finger protein | - |
| BN5_RS21270 () | 4512277..4512579 | - | 303 | Protein_4238 | RNA polymerase-binding protein DksA | - |
| BN5_RS21275 () | 4512651..4513541 | + | 891 | WP_003464796.1 | GTP cyclohydrolase I FolE2 | - |
| BN5_RS21280 () | 4513778..4515697 | + | 1920 | WP_003464798.1 | hypothetical protein | VF |
| BN5_RS21285 () | 4515694..4516401 | + | 708 | WP_003464800.1 | 3'-5' exonuclease | - |
| BN5_RS22245 () | 4516463..4516624 | + | 162 | WP_003464802.1 | DUF2986 domain-containing protein | - |
| BN5_RS21290 () | 4516825..4517079 | - | 255 | WP_003464804.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| BN5_RS21295 () | 4517076..4517327 | - | 252 | WP_003464807.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| BN5_RS21300 () | 4517482..4518384 | - | 903 | WP_003464809.1 | LysR family transcriptional regulator | - |
| BN5_RS21305 () | 4518568..4519956 | + | 1389 | WP_003464812.1 | L-serine ammonia-lyase | - |
| BN5_RS21310 () | 4520214..4521881 | - | 1668 | WP_003464814.1 | BCCT family transporter | - |
| BN5_RS21315 () | 4522163..4523608 | + | 1446 | WP_003464817.1 | cardiolipin synthase | - |
| BN5_RS21320 () | 4523667..4524392 | + | 726 | WP_003464818.1 | transporter substrate-binding domain-containing protein | - |
| BN5_RS21325 () | 4524396..4524908 | - | 513 | WP_003464820.1 | DUF3617 domain-containing protein | - |
| BN5_RS21330 () | 4525047..4525454 | - | 408 | WP_003464821.1 | DUF1850 domain-containing protein | - |
| BN5_RS21335 () | 4525451..4527478 | - | 2028 | WP_003464824.1 | TRAP transporter permease | - |
| BN5_RS21340 () | 4527613..4528566 | - | 954 | WP_003464827.1 | TAXI family TRAP transporter solute-binding subunit | - |
| BN5_RS21345 () | 4529192..4530532 | - | 1341 | WP_003464829.1 | C4-dicarboxylate transport transcriptional regulatory protein DctD | VF |
| BN5_RS21350 () | 4530765..4532516 | - | 1752 | WP_003464831.1 | C4-dicarboxylate transport sensor protein DctB | VF |
| BN5_RS21355 () | 4532557..4533741 | - | 1185 | WP_003464833.1 | class I SAM-dependent methyltransferase | - |
| BN5_RS21360 () | 4533826..4534833 | - | 1008 | WP_003464835.1 | Hemin transport system permease protein HmuU | VF |
| BN5_RS21365 () | 4534830..4535858 | - | 1029 | WP_003464837.1 | ABC transporter substrate-binding protein | - |
| BN5_RS21370 () | 4535858..4536628 | - | 771 | WP_003464839.1 | Ferric enterobactin transport ATP-binding protein FepC | VF |
| BN5_RS21375 () | 4536628..4537206 | - | 579 | WP_039965451.1 | TonB-dependent receptor | - |
| BN5_RS21380 () | 4537614..4538312 | - | 699 | WP_003464842.1 | (2Fe-2S) ferredoxin domain-containing protein | - |
| BN5_RS21385 () | 4538813..4539532 | - | 720 | WP_003464845.1 | cobalt-precorrin-6A reductase | - |
| BN5_RS21390 () | 4539529..4540731 | - | 1203 | WP_003464846.1 | bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase | - |
| BN5_RS21395 () | 4541330..4542643 | + | 1314 | WP_039965453.1 | precorrin-3B synthase | - |
| BN5_RS21400 () | 4542636..4543262 | + | 627 | WP_003464850.1 | precorrin-8X methylmutase | - |
| BN5_RS21405 () | 4543262..4544002 | + | 741 | WP_003464851.1 | precorrin-2 C(20)-methyltransferase | - |
| BN5_RS21410 () | 4544126..4545775 | + | 1650 | WP_003464853.1 | precorrin-3B C(17)-methyltransferase | - |
| BN5_RS21415 () | 4546350..4546907 | + | 558 | Protein_4268 | AraC family ligand binding domain-containing protein | - |
| BN5_RS21420 () | 4547280..4548260 | - | 981 | WP_039965456.1 | HTH-type transcriptional regulator CdhR | VF |
| BN5_RS21425 () | 4548355..4548966 | + | 612 | WP_003464859.1 | LysE family translocator | - |
| BN5_RS21430 () | 4548979..4549548 | - | 570 | WP_003464862.1 | flavin reductase family protein | - |
| BN5_RS21435 () | 4549632..4550375 | - | 744 | WP_003464863.1 | putative oxidoreductase | VF |
| BN5_RS21440 () | 4550516..4551427 | + | 912 | WP_003464864.1 | LysR family transcriptional regulator | - |
| BN5_RS21445 () | 4551529..4551828 | + | 300 | Protein_4274 | MFS transporter | - |
| BN5_RS21450 () | 4551884..4554145 | - | 2262 | WP_003464868.1 | Ferric aerobactin receptor | VF |
| BN5_RS21455 () | 4554168..4555397 | - | 1230 | WP_003464869.1 | MFS transporter | - |
| BN5_RS21460 () | 4555381..4555770 | - | 390 | WP_003464871.1 | hypothetical protein | - |
| BN5_RS21465 () | 4555917..4556870 | + | 954 | WP_003464873.1 | AraC family transcriptional regulator | - |
| BN5_RS21470 () | 4556989..4557477 | + | 489 | WP_003464876.1 | carboxymuconolactone decarboxylase family protein | - |
| BN5_RS21475 () | 4557657..4559819 | + | 2163 | WP_003464877.1 | TonB-dependent receptor | - |
| BN5_RS21480 () | 4559835..4560416 | + | 582 | WP_003464878.1 | hypothetical protein | - |
| BN5_RS21485 () | 4560460..4561227 | - | 768 | WP_003464879.1 | precorrin-6A synthase (deacetylating) | - |
| BN5_RS21490 () | 4561224..4561853 | - | 630 | WP_071387192.1 | VWA domain-containing protein | - |
| BN5_RS21495 () | 4561973..4562974 | - | 1002 | WP_039965460.1 | AAA family ATPase | - |
| BN5_RS21500 () | 4563210..4566956 | - | 3747 | WP_003464884.1 | cobaltochelatase subunit CobN | - |
| BN5_RS21505 () | 4567031..4568080 | - | 1050 | WP_003464886.1 | cobalamin biosynthesis protein CobW | - |
| BN5_RS21510 () | 4568457..4568894 | + | 438 | WP_039965462.1 | cobalamin biosynthesis protein | - |
| BN5_RS21515 () | 4568891..4569646 | + | 756 | WP_003464890.1 | precorrin-4 C(11)-methyltransferase | - |
| BN5_RS21520 () | 4569869..4570099 | - | 231 | WP_003464892.1 | hypothetical protein | - |
| BN5_RS21525 () | 4570287..4570499 | + | 213 | WP_039965463.1 | ParD-like family protein | - |
| BN5_RS21530 () | 4570496..4571275 | + | 780 | WP_003464896.1 | type I methionyl aminopeptidase | - |
| BN5_RS21535 () | 4573228..4574432 | - | 1205 | Protein_4292 | ISL3 family transposase ISAeme19 | Transposase |
| BN5_RS21540 () | 4574696..4574926 | - | 231 | WP_003464900.1 | hypothetical protein | - |
| BN5_RS21545 () | 4575321..4578461 | - | 3141 | WP_003464902.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| BN5_RS21550 () | 4578484..4579749 | - | 1266 | WP_003464904.1 | efflux RND transporter periplasmic adaptor subunit | - |
| BN5_RS21555 () | 4579807..4581057 | - | 1251 | WP_003464906.1 | TolC family protein | - |
| BN5_RS21560 () | 4581457..4582131 | + | 675 | WP_003464910.1 | Transcriptional activator protein CzcR | VF |
| BN5_RS21565 () | 4582128..4583561 | + | 1434 | WP_003464912.1 | heavy metal sensor histidine kinase | - |
| BN5_RS21570 () | 4584341..4584532 | - | 192 | WP_021488260.1 | hypothetical protein | - |
| BN5_RS21575 () | 4584674..4585819 | - | 1146 | Protein_4300 | OprD family porin | - |
| BN5_RS21580 () | 4585963..4587462 | + | 1500 | WP_003464919.1 | IS21 family transposase ISPst3 | Transposase |
| BN5_RS21585 () | 4587455..4588258 | + | 804 | WP_003459721.1 | IS21 family transposase ISPst3 | Transposase |
| BN5_RS23015 () | 4588902..4590596 | - | 1695 | WP_003464922.1 | TniQ family protein | - |
| BN5_RS23020 () | 4590900..4592564 | - | 1665 | WP_003464924.1 | TnsD family Tn7-like transposition protein | - |
| BN5_RS21600 () | 4592907..4594421 | + | 1515 | WP_003464926.1 | IS21-like element ISPpu7 family transposase | - |
| BN5_RS21605 () | 4594439..4595194 | + | 756 | WP_019437637.1 | IS21-like element ISPpu7 family helper ATPase IstB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|