MGE detailed information
MGE type: Prophage MGE length: 82289 bp
Accession: NZ_HF571988 Location: 2770478..2852766 Organism: Yersinia enterocolitica (type O:5) str. YE53/03 isolate host faecal sample Replicon: chromosome
Accession: NZ_HF571988 Location: 2770478..2852766 Organism: Yersinia enterocolitica (type O:5) str. YE53/03 isolate host faecal sample Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YE5303_RS12940 () | 2765656..2766681 | + | 1026 | WP_046051049.1 | ROK family protein | - |
| YE5303_RS12945 () | 2766919..2768091 | + | 1173 | WP_046051050.1 | MFS transporter | - |
| YE5303_RS12950 () | 2768272..2769090 | + | 819 | WP_019079178.1 | Cof-type HAD-IIB family hydrolase | - |
| YE5303_RS23505 () | 2770129..2770365 | + | 237 | WP_072076895.1 | DUF4224 domain-containing protein | - |
| YE5303_RS12955 () | 2770337..2771359 | + | 1023 | Protein_2532 | hypothetical protein ; Integrase | Integrase |
| YE5303_RS12960 () | 2771689..2772693 | - | 1005 | WP_046051051.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| YE5303_RS12965 () | 2772915..2773565 | - | 651 | WP_046051052.1 | membrane protein | - |
| YE5303_RS12970 () | 2773581..2773973 | - | 393 | WP_046051053.1 | helix-turn-helix domain-containing protein | - |
| YE5303_RS12975 () | 2774252..2774455 | + | 204 | WP_046051054.1 | hypothetical protein | - |
| YE5303_RS12980 () | 2774467..2774703 | + | 237 | WP_046051055.1 | hypothetical protein | - |
| YE5303_RS12985 () | 2774761..2775069 | + | 309 | WP_046051056.1 | hypothetical protein | - |
| YE5303_RS12990 () | 2775146..2777758 | + | 2613 | WP_046051057.1 | replication endonuclease | - |
| YE5303_RS12995 () | 2777739..2777969 | + | 231 | WP_046051058.1 | hypothetical protein | - |
| YE5303_RS13000 () | 2777966..2778310 | + | 345 | WP_046051059.1 | hypothetical protein | - |
| YE5303_RS13005 () | 2778613..2781231 | + | 2619 | WP_046051060.1 | PHP domain-containing protein | - |
| YE5303_RS13010 () | 2781800..2782486 | + | 687 | WP_046051061.1 | hypothetical protein | - |
| YE5303_RS13015 () | 2782487..2783527 | - | 1041 | WP_046051062.1 | phage portal protein | - |
| YE5303_RS13020 () | 2783527..2785290 | - | 1764 | WP_046051063.1 | terminase family protein | - |
| YE5303_RS13025 () | 2785459..2786271 | + | 813 | WP_046051064.1 | GPO family capsid scaffolding protein | - |
| YE5303_RS13030 () | 2786308..2787363 | + | 1056 | WP_046051065.1 | phage major capsid protein, P2 family | - |
| YE5303_RS13035 () | 2787370..2788023 | + | 654 | WP_046051066.1 | hypothetical protein | - |
| YE5303_RS13040 () | 2788256..2788747 | + | 492 | WP_046051067.1 | head completion/stabilization protein | - |
| YE5303_RS13045 () | 2788747..2788950 | + | 204 | WP_046051068.1 | tail protein X | - |
| YE5303_RS23510 () | 2788981..2789367 | + | 387 | WP_072083002.1 | phage holin family protein | - |
| YE5303_RS13060 () | 2789354..2789749 | + | 396 | WP_046051069.1 | M15 family metallopeptidase | - |
| YE5303_RS13065 () | 2789754..2790179 | + | 426 | WP_046051070.1 | Rz-like lysis system protein LysB | - |
| YE5303_RS13070 () | 2790278..2790745 | + | 468 | WP_046051071.1 | phage tail protein | - |
| YE5303_RS13075 () | 2790742..2791188 | + | 447 | WP_046051072.1 | phage virion morphogenesis protein | - |
| YE5303_RS13080 () | 2791200..2791799 | - | 600 | WP_046051073.1 | hypothetical protein | - |
| YE5303_RS13090 () | 2792356..2793057 | + | 702 | WP_046051075.1 | hypothetical protein | - |
| YE5303_RS13100 () | 2793395..2794030 | + | 636 | WP_046051077.1 | phage baseplate assembly protein V | - |
| YE5303_RS13105 () | 2794027..2794383 | + | 357 | WP_046051078.1 | GPW/gp25 family protein | - |
| YE5303_RS13110 () | 2794383..2795291 | + | 909 | WP_046051079.1 | baseplate assembly protein | - |
| YE5303_RS13115 () | 2795284..2795832 | + | 549 | WP_046051080.1 | phage tail protein I | - |
| YE5303_RS13120 () | 2796076..2797369 | + | 1294 | Protein_2562 | phage tail protein | - |
| YE5303_RS13125 () | 2797369..2797983 | + | 615 | WP_046051082.1 | tail fiber assembly protein | - |
| YE5303_RS13130 () | 2798026..2798304 | - | 279 | WP_005170383.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| YE5303_RS13135 () | 2798311..2798571 | - | 261 | WP_046051083.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| YE5303_RS13145 () | 2798952..2799158 | + | 207 | WP_046051084.1 | host cell division inhibitor Icd-like protein | - |
| YE5303_RS13150 () | 2799148..2799468 | + | 321 | WP_046051085.1 | hypothetical protein | - |
| YE5303_RS13155 () | 2799912..2800100 | + | 189 | WP_046051086.1 | hypothetical protein | VF |
| YE5303_RS13160 () | 2800295..2801191 | + | 897 | WP_072088421.1 | ISNCY family transposase ISRor2 | VF |
| YE5303_RS23520 () | 2801402..2801608 | + | 207 | Protein_2570 | ash family protein | - |
| YE5303_RS13165 () | 2801760..2801954 | + | 195 | WP_046051088.1 | hypothetical protein | - |
| YE5303_RS13170 () | 2802257..2803432 | + | 1176 | WP_046051089.1 | phage tail sheath protein | - |
| YE5303_RS13175 () | 2803444..2803959 | + | 516 | WP_046051090.1 | phage major tail tube protein | - |
| YE5303_RS13180 () | 2804120..2804431 | + | 312 | WP_046051091.1 | phage tail assembly protein | - |
| YE5303_RS23525 () | 2804446..2804565 | + | 120 | WP_049530285.1 | GpE family phage tail protein | - |
| YE5303_RS13185 () | 2804558..2807485 | + | 2928 | WP_046051092.1 | phage tail tape measure protein | - |
| YE5303_RS13190 () | 2807497..2807961 | + | 465 | WP_046051093.1 | phage tail protein | - |
| YE5303_RS13195 () | 2807964..2809064 | + | 1101 | WP_098057494.1 | phage late control D family protein | - |
| YE5303_RS13200 () | 2809139..2809354 | + | 216 | WP_046051095.1 | ogr/Delta-like zinc finger family protein | - |
| YE5303_RS13205 () | 2809778..2811307 | - | 1530 | WP_019082965.1 | hypothetical protein ; Integrase | Integrase |
| YE5303_RS23530 () | 2811618..2812846 | + | 1229 | WP_110129298.1 | IS3 family transposase ISEc27 | Transposase |
| YE5303_RS13220 () | 2813121..2816180 | + | 3060 | WP_046051096.1 | hypothetical protein | VF |
| YE5303_RS13225 () | 2816239..2816679 | - | 441 | WP_072083000.1 | tail fiber assembly protein | - |
| YE5303_RS13230 () | 2816688..2818499 | - | 1812 | WP_046051098.1 | hypothetical protein | - |
| YE5303_RS13235 () | 2818525..2819229 | - | 705 | WP_046051099.1 | hypothetical protein | - |
| YE5303_RS13240 () | 2819229..2819495 | - | 267 | WP_019079554.1 | hypothetical protein | - |
| YE5303_RS13245 () | 2819498..2820463 | - | 966 | WP_046051100.1 | DUF1983 domain-containing protein | - |
| YE5303_RS13255 () | 2820564..2821714 | + | 1151 | WP_154393687.1 | IS3 family transposase ISSpr1 | Transposase |
| YE5303_RS13260 () | 2821730..2822209 | - | 480 | WP_046052032.1 | hypothetical protein | - |
| YE5303_RS13270 () | 2823131..2823481 | - | 351 | WP_046051102.1 | hypothetical protein | - |
| YE5303_RS13280 () | 2823891..2824208 | - | 318 | WP_011816460.1 | hypothetical protein | - |
| YE5303_RS13285 () | 2824420..2824767 | - | 348 | WP_046051103.1 | TonB family protein | - |
| YE5303_RS13290 () | 2824927..2825676 | - | 750 | WP_046051104.1 | Ig domain-containing protein | - |
| YE5303_RS13295 () | 2825701..2826084 | - | 384 | WP_046051105.1 | hypothetical protein | - |
| YE5303_RS13300 () | 2826081..2826449 | - | 369 | WP_046051106.1 | hypothetical protein | - |
| YE5303_RS24125 () | 2826451..2826801 | - | 351 | WP_046051107.1 | hypothetical protein | - |
| YE5303_RS23985 () | 2826731..2826925 | - | 195 | WP_154235943.1 | hypothetical protein | - |
| YE5303_RS13315 () | 2827112..2827483 | - | 372 | WP_046051108.1 | hypothetical protein | - |
| YE5303_RS13320 () | 2827486..2827851 | - | 366 | WP_046051109.1 | hypothetical protein | - |
| YE5303_RS13325 () | 2827861..2828937 | - | 1077 | WP_046051110.1 | hypothetical protein | - |
| YE5303_RS13330 () | 2828948..2829388 | - | 441 | WP_046051111.1 | hypothetical protein | - |
| YE5303_RS13335 () | 2829392..2830789 | - | 1398 | WP_046051112.1 | hypothetical protein | - |
| YE5303_RS13340 () | 2830959..2831840 | - | 882 | WP_080342205.1 | phage head morphogenesis protein | - |
| YE5303_RS13345 () | 2831878..2833335 | - | 1458 | WP_046051113.1 | DUF1073 domain-containing protein | - |
| YE5303_RS13350 () | 2833346..2834818 | - | 1473 | WP_046051114.1 | terminase | - |
| YE5303_RS13355 () | 2834818..2835420 | - | 603 | WP_046051115.1 | hypothetical protein | - |
| YE5303_RS13365 () | 2835919..2836107 | - | 189 | WP_046052036.1 | hypothetical protein | - |
| YE5303_RS13370 () | 2836124..2836456 | - | 333 | Protein_2608 | DUF2570 domain-containing protein | - |
| YE5303_RS13375 () | 2836449..2836982 | - | 534 | WP_046051117.1 | lysozyme | - |
| YE5303_RS13380 () | 2836982..2837248 | - | 267 | WP_046051118.1 | hypothetical protein | - |
| YE5303_RS13385 () | 2837688..2838260 | - | 573 | WP_046051119.1 | DUF1133 family protein | - |
| YE5303_RS13390 () | 2838257..2838541 | - | 285 | WP_046051120.1 | DUF1364 domain-containing protein | - |
| YE5303_RS13395 () | 2838550..2839143 | - | 594 | WP_046051121.1 | DUF1367 family protein | - |
| YE5303_RS13400 () | 2839247..2839510 | - | 264 | WP_046051122.1 | hypothetical protein | - |
| YE5303_RS13405 () | 2839553..2839906 | - | 354 | WP_046051123.1 | hypothetical protein | - |
| YE5303_RS13410 () | 2839903..2842068 | - | 2166 | WP_046051124.1 | DNA cytosine methyltransferase | - |
| YE5303_RS13415 () | 2842065..2842571 | - | 507 | WP_046051125.1 | hypothetical protein | - |
| YE5303_RS13420 () | 2842568..2842819 | - | 252 | WP_046051126.1 | hypothetical protein | - |
| YE5303_RS13425 () | 2842824..2843204 | - | 381 | WP_046051127.1 | hypothetical protein | - |
| YE5303_RS13430 () | 2843249..2844610 | - | 1362 | WP_046051128.1 | replicative DNA helicase | - |
| YE5303_RS13435 () | 2844607..2845581 | - | 975 | WP_046051129.1 | helix-turn-helix domain-containing protein | - |
| YE5303_RS13440 () | 2845584..2845808 | - | 225 | WP_046051130.1 | hypothetical protein | - |
| YE5303_RS13445 () | 2845825..2846289 | - | 465 | WP_046051131.1 | tRNA-(guanine-N1)-methyltransferase | - |
| YE5303_RS13450 () | 2846350..2846535 | - | 186 | WP_046051132.1 | Cro/Cl family transcriptional regulator | - |
| YE5303_RS13455 () | 2846628..2847290 | + | 663 | WP_172666731.1 | LexA family transcriptional regulator | - |
| YE5303_RS23990 () | 2847531..2847686 | + | 156 | WP_154235942.1 | hypothetical protein | - |
| YE5303_RS13460 () | 2847997..2848332 | + | 336 | WP_046051133.1 | hypothetical protein | - |
| YE5303_RS13465 () | 2848388..2850586 | + | 2199 | WP_046051134.1 | hypothetical protein | - |
| YE5303_RS13470 () | 2850583..2851083 | + | 501 | WP_046051135.1 | siphovirus Gp157 family protein | - |
| YE5303_RS13475 () | 2851129..2851311 | + | 183 | WP_019082908.1 | hypothetical protein | - |
| YE5303_RS13485 () | 2851524..2851760 | + | 237 | WP_046051137.1 | DUF4224 domain-containing protein | - |
| YE5303_RS13490 () | 2851750..2852766 | + | 1017 | Protein_2632 | hypothetical protein ; Integrase | Integrase |
| YE5303_RS13510 () | 2853347..2853895 | - | 549 | WP_019080796.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| YE5303_RS13515 () | 2853954..2855786 | - | 1833 | WP_019080797.1 | excinuclease ABC subunit UvrC | - |
| YE5303_RS13520 () | 2855779..2856435 | - | 657 | WP_005160181.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| YE5303_RS13525 () | 2857129..2857353 | + | 225 | WP_019080798.1 | DUF2594 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|