MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 45436 bp
Accession: NZ_HF545616 Location: 1842415..1887850 Organism: Ruminococcus bicirculans strain 80/3 Replicon: chromosome
Accession: NZ_HF545616 Location: 1842415..1887850 Organism: Ruminococcus bicirculans strain 80/3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RBI_RS14175 () | 1837485..1840025 | + | 2541 | WP_051706697.1 | fibronectin type III domain-containing protein | - |
| RBI_RS08515 () | 1840271..1840927 | - | 657 | WP_022287608.1 | HD domain-containing protein | - |
| RBI_RS08520 () | 1841273..1842226 | - | 954 | WP_038672317.1 | GTP-binding protein | - |
| RBI_RS08525 () | 1842676..1843491 | + | 816 | WP_051706699.1 | Sporulation initiation inhibitor protein Soj | VF |
| RBI_RS08530 () | 1843504..1844430 | + | 927 | WP_038672319.1 | ParB/RepB/Spo0J family partition protein | - |
| RBI_RS08535 () | 1844463..1844696 | + | 234 | WP_038672321.1 | hypothetical protein | - |
| RBI_RS08540 () | 1844689..1845027 | + | 339 | WP_038672324.1 | hypothetical protein | - |
| RBI_RS08545 () | 1845047..1845481 | + | 435 | WP_038672325.1 | hypothetical protein | - |
| RBI_RS14180 () | 1845584..1846429 | + | 846 | WP_051706701.1 | PD-(D/E)XK nuclease family transposase | - |
| RBI_RS08565 () | 1847366..1847896 | + | 531 | WP_038672330.1 | hypothetical protein | - |
| RBI_RS14185 () | 1848083..1848484 | + | 402 | WP_051706702.1 | hypothetical protein | - |
| RBI_RS14190 () | 1848507..1849427 | + | 921 | WP_051706704.1 | DNA polymerase III subunit epsilon | - |
| RBI_RS08580 () | 1849476..1850483 | + | 1008 | WP_038672332.1 | toll/interleukin-1 receptor domain-containing protein | - |
| RBI_RS08585 () | 1850850..1851749 | + | 900 | WP_038672334.1 | hypothetical protein | - |
| RBI_RS08590 () | 1851882..1855079 | + | 3198 | WP_038672336.1 | NPXTG-anchored protein | - |
| RBI_RS08595 () | 1855129..1855527 | + | 399 | WP_038672338.1 | hypothetical protein | - |
| RBI_RS08600 () | 1855520..1855828 | + | 309 | WP_038672340.1 | hypothetical protein | - |
| RBI_RS08605 () | 1855825..1856253 | + | 429 | WP_038672342.1 | hypothetical protein | - |
| RBI_RS08610 () | 1856257..1856529 | + | 273 | WP_038672344.1 | hypothetical protein | - |
| RBI_RS08615 () | 1856510..1856695 | + | 186 | WP_038672345.1 | hypothetical protein | - |
| RBI_RS08620 () | 1856688..1857071 | + | 384 | WP_148303589.1 | hypothetical protein | - |
| RBI_RS08625 () | 1857037..1857807 | - | 771 | WP_038672349.1 | hypothetical protein | - |
| RBI_RS08630 () | 1857941..1858672 | + | 732 | WP_038672351.1 | hypothetical protein | - |
| RBI_RS08635 () | 1858678..1858896 | + | 219 | WP_038672353.1 | hypothetical protein | - |
| RBI_RS08640 () | 1859022..1859273 | + | 252 | WP_158455140.1 | hypothetical protein | - |
| RBI_RS14195 () | 1859290..1867848 | + | 8559 | WP_051706706.1 | DEAD/DEAH box helicase family protein | - |
| RBI_RS08650 () | 1867873..1868934 | + | 1062 | WP_038672357.1 | toprim domain-containing protein | - |
| RBI_RS08655 () | 1868938..1869288 | + | 351 | WP_038672360.1 | hypothetical protein | - |
| RBI_RS08660 () | 1869380..1871821 | + | 2442 | WP_038672362.1 | collagen-like protein | - |
| RBI_RS08665 () | 1871825..1872124 | + | 300 | WP_038672365.1 | hypothetical protein | - |
| RBI_RS08670 () | 1872121..1874796 | + | 2676 | WP_038672367.1 | hypothetical protein | - |
| RBI_RS14200 () | 1874793..1875965 | + | 1173 | WP_051706708.1 | Ig domain-containing protein | - |
| RBI_RS08680 () | 1875982..1876284 | + | 303 | WP_038672369.1 | DUF3217 domain-containing protein | - |
| RBI_RS08685 () | 1876295..1876861 | + | 567 | WP_038672371.1 | hypothetical protein | - |
| RBI_RS08690 () | 1876864..1877235 | + | 372 | WP_038672372.1 | hypothetical protein | - |
| RBI_RS08695 () | 1877649..1878017 | + | 369 | WP_148303591.1 | hypothetical protein | - |
| RBI_RS08700 () | 1878014..1881409 | + | 3396 | WP_038672375.1 | SEL1-like repeat protein | - |
| RBI_RS08705 () | 1881422..1883926 | + | 2505 | WP_038672377.1 | type IV secretory system conjugative DNA transfer family protein | - |
| RBI_RS08710 () | 1883913..1884659 | + | 747 | WP_038672379.1 | helix-turn-helix domain-containing protein | - |
| RBI_RS08715 () | 1884876..1885958 | + | 1083 | WP_038672381.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| RBI_RS08720 () | 1886040..1886222 | + | 183 | WP_038672383.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| RBI_RS08725 () | 1886259..1886669 | + | 411 | WP_038672386.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| RBI_RS08730 () | 1886716..1886988 | + | 273 | WP_038672388.1 | helix-turn-helix domain-containing protein | - |
| RBI_RS08740 () | 1888224..1890398 | + | 2175 | WP_022287606.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| RBI_RS08745 () | 1890654..1891172 | + | 519 | WP_038672390.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|