MGE detailed information
MGE type: Prophage MGE length: 25256 bp
Accession: NZ_CP128542 Location: 3996616..4021871 Organism: Pseudomonas asiatica strain NMI3658_15 Replicon: chromosome
Accession: NZ_CP128542 Location: 3996616..4021871 Organism: Pseudomonas asiatica strain NMI3658_15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU687_RS19045 (LU687_019045) | 3991625..3993478 | + | 1854 | WP_015271055.1 | NADH-quinone oxidoreductase subunit L | - |
| LU687_RS19050 (LU687_019050) | 3993528..3995060 | + | 1533 | WP_015271056.1 | NADH-quinone oxidoreductase subunit M | - |
| LU687_RS19055 (LU687_019055) | 3995068..3996537 | + | 1470 | WP_013973390.1 | NADH-quinone oxidoreductase subunit NuoN | - |
| LU687_RS19060 (LU687_019060) | 3996616..3996879 | - | 264 | WP_023662582.1 | ogr/Delta-like zinc finger family protein | - |
| LU687_RS19065 (LU687_019065) | 3997080..3997472 | + | 393 | WP_003261013.1 | helix-turn-helix domain-containing protein | - |
| LU687_RS19070 (LU687_019070) | 3997469..3997831 | - | 363 | WP_015271057.1 | hypothetical protein | - |
| LU687_RS19075 (LU687_019075) | 3997824..3998171 | - | 348 | WP_015271058.1 | head completion/stabilization protein | - |
| LU687_RS19080 (LU687_019080) | 3998183..3998431 | - | 249 | WP_003261017.1 | Transcriptional activator protein LasR | VF |
| LU687_RS19085 (LU687_019085) | 3998652..4000718 | + | 2067 | WP_015271059.1 | TonB-dependent receptor | - |
| LU687_RS19090 (LU687_019090) | 4000861..4001418 | - | 558 | WP_015271060.1 | class I chromate reductase ChrR | - |
| LU687_RS19095 (LU687_019095) | 4001576..4001794 | + | 219 | WP_015271061.1 | hypothetical protein | - |
| LU687_RS19100 (LU687_019100) | 4001778..4004027 | - | 2250 | WP_015271062.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| LU687_RS19105 (LU687_019105) | 4004294..4005052 | - | 759 | WP_015271063.1 | DNA polymerase III subunit epsilon | - |
| LU687_RS19110 (LU687_019110) | 4005104..4005550 | - | 447 | WP_003261021.1 | ribonuclease HI | - |
| LU687_RS19115 (LU687_019115) | 4005564..4006337 | - | 774 | WP_013973399.1 | methyltransferase domain-containing protein | - |
| LU687_RS19120 (LU687_019120) | 4006423..4007202 | + | 780 | WP_015271064.1 | hydroxyacylglutathione hydrolase | - |
| LU687_RS19125 (LU687_019125) | 4007303..4008733 | + | 1431 | WP_015271065.1 | Membrane-bound lytic murein transglycosylase D | VF |
| LU687_RS19130 (LU687_019130) | 4009013..4010842 | + | 1830 | WP_202982205.1 | extracellular solute-binding protein | - |
| LU687_RS19135 (LU687_019135) | 4010839..4012674 | + | 1836 | WP_015271067.1 | extracellular solute-binding protein | - |
| LU687_RS19140 (LU687_019140) | 4012676..4013749 | + | 1074 | WP_009686399.1 | microcin C ABC transporter permease YejB | - |
| LU687_RS19145 (LU687_019145) | 4013751..4014770 | + | 1020 | WP_013973404.1 | ABC transporter permease | - |
| LU687_RS19150 (LU687_019150) | 4014772..4016385 | + | 1614 | WP_015271068.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LU687_RS19155 (LU687_019155) | 4016843..4017085 | + | 243 | WP_015271069.1 | hypothetical protein | - |
| LU687_RS19160 (LU687_019160) | 4017242..4017505 | + | 264 | WP_015271070.1 | DUF3077 domain-containing protein | - |
| LU687_RS19165 (LU687_019165) | 4017687..4018154 | + | 468 | WP_015271071.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LU687_RS19170 (LU687_019170) | 4018151..4018726 | + | 576 | WP_015271072.1 | PIN domain-containing protein | Toxin Detail |
| LU687_RS19175 (LU687_019175) | 4018941..4021871 | + | 2931 | WP_015271073.1 | aminotransferase | - |
| LU687_RS19180 (LU687_019180) | 4022234..4023139 | + | 906 | WP_013973410.1 | LysR family transcriptional regulator | - |
| LU687_RS19185 (LU687_019185) | 4023262..4024221 | + | 960 | WP_015271074.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|