MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 53555 bp
Accession: NZ_CP128416 Location: 4810971..4864525 Organism: Rhizobium sp. CSC1952 Replicon: chromosome
Accession: NZ_CP128416 Location: 4810971..4864525 Organism: Rhizobium sp. CSC1952 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QTA58_RS23370 (QTA58_23370) | 4806579..4806893 | + | 315 | WP_289671079.1 | hypothetical protein | - |
| QTA58_RS23375 (QTA58_23375) | 4806917..4807390 | + | 474 | WP_289671080.1 | hypothetical protein | - |
| QTA58_RS23380 (QTA58_23380) | 4807481..4808026 | + | 546 | WP_289671081.1 | GNAT family N-acetyltransferase | - |
| QTA58_RS23385 (QTA58_23385) | 4808407..4808781 | + | 375 | WP_289671082.1 | hypothetical protein | - |
| QTA58_RS23390 (QTA58_23390) | 4808885..4809814 | - | 930 | WP_289671083.1 | zinc metalloprotease HtpX | - |
| QTA58_RS23395 (QTA58_23395) | 4809774..4811507 | - | 1734 | WP_289671084.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QTA58_RS23400 (QTA58_23400) | 4811597..4811899 | - | 303 | WP_289671085.1 | hypothetical protein | - |
| QTA58_RS23405 (QTA58_23405) | 4811899..4812771 | - | 873 | WP_289671086.1 | hypothetical protein ; Integrase | Integrase |
| QTA58_RS23410 (QTA58_23410) | 4813579..4813797 | + | 219 | WP_289671087.1 | hypothetical protein | - |
| QTA58_RS23415 (QTA58_23415) | 4813794..4814480 | + | 687 | WP_289671088.1 | DNA methyltransferase | - |
| QTA58_RS23420 (QTA58_23420) | 4814954..4815505 | + | 552 | WP_289671090.1 | hypothetical protein | - |
| QTA58_RS23425 (QTA58_23425) | 4815561..4815767 | - | 207 | WP_289671092.1 | hypothetical protein | - |
| QTA58_RS23430 (QTA58_23430) | 4815787..4816302 | - | 516 | WP_289671094.1 | hypothetical protein | - |
| QTA58_RS23435 (QTA58_23435) | 4816316..4818283 | - | 1968 | WP_289671096.1 | AAA family ATPase | - |
| QTA58_RS23440 (QTA58_23440) | 4818476..4819045 | - | 570 | WP_289671098.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| QTA58_RS23445 (QTA58_23445) | 4819371..4819718 | + | 348 | WP_289671100.1 | hypothetical protein | - |
| QTA58_RS23450 (QTA58_23450) | 4819743..4820282 | + | 540 | WP_289671101.1 | hypothetical protein | - |
| QTA58_RS23455 (QTA58_23455) | 4820332..4821093 | + | 762 | WP_289671103.1 | hypothetical protein | - |
| QTA58_RS23460 (QTA58_23460) | 4821333..4821815 | - | 483 | WP_289671105.1 | hypothetical protein | - |
| QTA58_RS23465 (QTA58_23465) | 4821812..4823188 | - | 1377 | WP_289671107.1 | hypothetical protein ; Integrase | Integrase |
| QTA58_RS23470 (QTA58_23470) | 4823507..4824454 | + | 948 | WP_289671109.1 | DUF2726 domain-containing protein | - |
| QTA58_RS23475 (QTA58_23475) | 4824510..4825859 | - | 1350 | WP_289671111.1 | hypothetical protein | - |
| QTA58_RS23480 (QTA58_23480) | 4825895..4827625 | - | 1731 | WP_289671113.1 | ATP-dependent helicase | - |
| QTA58_RS23485 (QTA58_23485) | 4827622..4829370 | - | 1749 | WP_289671115.1 | ATP-dependent endonuclease | - |
| QTA58_RS23490 (QTA58_23490) | 4829842..4830420 | + | 579 | WP_085423455.1 | TetR/AcrR family transcriptional regulator | - |
| QTA58_RS23495 (QTA58_23495) | 4830491..4831243 | + | 753 | WP_289671118.1 | Cyclic-di-GMP-binding biofilm dispersal mediator protein | VF |
| QTA58_RS23500 (QTA58_23500) | 4831299..4831898 | - | 600 | WP_085423179.1 | NAD(P)H:quinone oxidoreductase type IV | - |
| QTA58_RS23505 (QTA58_23505) | 4832151..4832936 | + | 786 | WP_289671121.1 | competence/damage-inducible protein A | - |
| QTA58_RS23510 (QTA58_23510) | 4833057..4833896 | + | 840 | WP_085423178.1 | universal stress protein | - |
| QTA58_RS23515 (QTA58_23515) | 4834161..4835120 | + | 960 | WP_289671122.1 | bile acid:sodium symporter family protein | - |
| QTA58_RS23520 (QTA58_23520) | 4835199..4835696 | + | 498 | WP_085423176.1 | xanthine phosphoribosyltransferase | - |
| QTA58_RS23525 (QTA58_23525) | 4836385..4840215 | + | 3831 | WP_289671123.1 | vitamin B12-dependent ribonucleotide reductase | - |
| QTA58_RS23530 (QTA58_23530) | 4840510..4841142 | - | 633 | WP_289671124.1 | porin family protein | - |
| QTA58_RS23535 (QTA58_23535) | 4842755..4843540 | - | 786 | WP_289671125.1 | class I SAM-dependent methyltransferase | - |
| QTA58_RS23540 (QTA58_23540) | 4843763..4844788 | - | 1026 | WP_085423171.1 | cell division protein FtsZ | - |
| QTA58_RS23545 (QTA58_23545) | 4845010..4845228 | + | 219 | WP_085423453.1 | hypothetical protein | - |
| QTA58_RS23550 (QTA58_23550) | 4845311..4846315 | + | 1005 | WP_289671126.1 | 2-dehydropantoate 2-reductase | - |
| QTA58_RS23555 (QTA58_23555) | 4846340..4846918 | + | 579 | WP_289671127.1 | YdeI/OmpD-associated family protein | - |
| QTA58_RS23560 (QTA58_23560) | 4847045..4847986 | - | 942 | WP_289671128.1 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | VF |
| QTA58_RS23565 (QTA58_23565) | 4848318..4848632 | + | 315 | WP_085423168.1 | DUF1883 domain-containing protein | - |
| QTA58_RS23570 (QTA58_23570) | 4848656..4849972 | - | 1317 | WP_289671129.1 | replication-associated recombination protein A | - |
| QTA58_RS23575 (QTA58_23575) | 4849969..4851372 | - | 1404 | WP_085423166.1 | Periplasmic serine endoprotease DegP | VF |
| QTA58_RS23580 (QTA58_23580) | 4851507..4851887 | + | 381 | WP_289671130.1 | YkvA family protein | - |
| QTA58_RS23585 (QTA58_23585) | 4851923..4852285 | + | 363 | WP_289671131.1 | hypothetical protein | - |
| QTA58_RS23590 (QTA58_23590) | 4852303..4852632 | - | 330 | WP_289671132.1 | DUF5615 family PIN-like protein | Toxin Detail |
| QTA58_RS23595 (QTA58_23595) | 4852632..4852856 | - | 225 | WP_289671133.1 | DUF433 domain-containing protein | Antitoxin Detail |
| QTA58_RS23600 (QTA58_23600) | 4852946..4854781 | - | 1836 | WP_289671134.1 | dihydroxy-acid dehydratase | - |
| QTA58_RS23605 (QTA58_23605) | 4854933..4855343 | - | 411 | WP_289671135.1 | DUF4112 domain-containing protein | - |
| QTA58_RS23610 (QTA58_23610) | 4855551..4856495 | + | 945 | WP_289671136.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| QTA58_RS23615 (QTA58_23615) | 4856495..4857136 | + | 642 | WP_289671137.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| QTA58_RS23620 (QTA58_23620) | 4857194..4857619 | - | 426 | WP_085423157.1 | 50S ribosomal protein L17 | - |
| QTA58_RS23625 (QTA58_23625) | 4857665..4858675 | - | 1011 | WP_085423156.1 | DNA-directed RNA polymerase subunit alpha | - |
| QTA58_RS23630 (QTA58_23630) | 4858891..4859280 | - | 390 | WP_007766864.1 | 30S ribosomal protein S11 | - |
| QTA58_RS23635 (QTA58_23635) | 4859401..4859769 | - | 369 | WP_085423155.1 | 30S ribosomal protein S13 | - |
| QTA58_RS23640 (QTA58_23640) | 4860066..4860716 | - | 651 | WP_085423154.1 | adenylate kinase | - |
| QTA58_RS23645 (QTA58_23645) | 4860713..4862053 | - | 1341 | WP_085423153.1 | preprotein translocase subunit SecY | - |
| QTA58_RS23650 (QTA58_23650) | 4862290..4862769 | - | 480 | WP_085423152.1 | 50S ribosomal protein L15 | - |
| QTA58_RS23655 (QTA58_23655) | 4862786..4862992 | - | 207 | WP_085423151.1 | 50S ribosomal protein L30 | - |
| QTA58_RS23660 (QTA58_23660) | 4863005..4863574 | - | 570 | WP_085423150.1 | 30S ribosomal protein S5 | - |
| QTA58_RS23665 (QTA58_23665) | 4863704..4864066 | - | 363 | WP_289671138.1 | 50S ribosomal protein L18 | - |
| QTA58_RS23670 (QTA58_23670) | 4864079..4864612 | - | 534 | WP_289671139.1 | 50S ribosomal protein L6 | - |
| QTA58_RS23675 (QTA58_23675) | 4864655..4865053 | - | 399 | WP_085423147.1 | 30S ribosomal protein S8 | - |
| QTA58_RS23680 (QTA58_23680) | 4865066..4865371 | - | 306 | WP_085423146.1 | 30S ribosomal protein S14 | - |
| QTA58_RS23685 (QTA58_23685) | 4865405..4865962 | - | 558 | WP_085423145.1 | 50S ribosomal protein L5 | - |
| QTA58_RS23690 (QTA58_23690) | 4865955..4866263 | - | 309 | WP_085423144.1 | 50S ribosomal protein L24 | - |
| QTA58_RS23695 (QTA58_23695) | 4866277..4866645 | - | 369 | WP_007770138.1 | 50S ribosomal protein L14 | - |
| QTA58_RS23700 (QTA58_23700) | 4866879..4867115 | - | 237 | WP_003495195.1 | 30S ribosomal protein S17 | - |
| QTA58_RS23705 (QTA58_23705) | 4867127..4867327 | - | 201 | WP_085423143.1 | 50S ribosomal protein L29 | - |
| QTA58_RS23710 (QTA58_23710) | 4867340..4867753 | - | 414 | WP_085423142.1 | 50S ribosomal protein L16 | - |
| QTA58_RS23715 (QTA58_23715) | 4867792..4868526 | - | 735 | WP_085423141.1 | 30S ribosomal protein S3 | - |
| QTA58_RS23720 (QTA58_23720) | 4868526..4868915 | - | 390 | WP_085423140.1 | 50S ribosomal protein L22 | - |
| QTA58_RS23725 (QTA58_23725) | 4868918..4869196 | - | 279 | WP_085423139.1 | 30S ribosomal protein S19 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|