MGE detailed information
MGE type: Conjugative plasmid MGE length: 61762 bp
Accession: NZ_CP127851 Location: 1..61762 Organism: Escherichia coli strain MB7671 Replicon: plasmid pMB7671_3
Accession: NZ_CP127851 Location: 1..61762 Organism: Escherichia coli strain MB7671 Replicon: plasmid pMB7671_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PJZ59_RS23635 (1) | 1..858 | + | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| PJZ59_RS23640 (1770) | 1770..2039 | + | 270 | WP_000079935.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| PJZ59_RS23645 (2039) | 2039..2317 | + | 279 | WP_244493824.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| PJZ59_RS23650 (2363) | 2363..3211 | + | 849 | WP_001058003.1 | 3'-5' exonuclease | - |
| PJZ59_RS23655 (3328) | 3328..3810 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| PJZ59_RS23660 (4170) | 4170..5286 | - | 1117 | Protein_5 | IS91 family transposase IS91 | Transposase |
| PJZ59_RS23665 (5286) | 5286..5651 | - | 366 | WP_000124093.1 | hypothetical protein | - |
| PJZ59_RS23670 (6179) | 6179..6688 | + | 510 | WP_000115002.1 | peptide deformylase | - |
| PJZ59_RS23675 (6703) | 6703..6804 | + | 102 | Protein_8 | methionyl-tRNA formyltransferase | - |
| PJZ59_RS23680 (7001) | 7001..7192 | + | 192 | WP_000175572.1 | DUF2164 family protein | - |
| PJZ59_RS23685 (7189) | 7189..7551 | + | 363 | WP_285934416.1 | nuclear transport factor 2 family protein | - |
| PJZ59_RS23690 (7593) | 7593..7739 | - | 147 | WP_001300272.1 | hypothetical protein | - |
| PJZ59_RS23695 (7884) | 7884..8411 | - | 528 | WP_001196880.1 | DoxX family protein | - |
| PJZ59_RS23700 (8413) | 8413..9171 | - | 759 | WP_001181584.1 | DNA-binding domain-containing protein | - |
| PJZ59_RS23705 (9140) | 9140..10066 | - | 927 | WP_000989040.1 | DUF692 domain-containing protein | - |
| PJZ59_RS23710 (10098) | 10098..10388 | - | 291 | WP_000754127.1 | DUF2282 domain-containing protein | - |
| PJZ59_RS23715 (10697) | 10697..11254 | - | 558 | WP_000103553.1 | hypothetical protein | VF |
| PJZ59_RS23720 (11929) | 11929..12468 | + | 540 | WP_250546652.1 | hypothetical protein | - |
| PJZ59_RS23725 (12536) | 12536..12655 | - | 120 | Protein_18 | transposase domain-containing protein | - |
| PJZ59_RS23730 (12857) | 12857..13837 | + | 981 | WP_001218105.1 | plasmid segregation protein ParM | - |
| PJZ59_RS23735 (13840) | 13840..14262 | + | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| PJZ59_RS23740 (14286) | 14286..14576 | + | 291 | WP_061092123.1 | hypothetical protein | - |
| PJZ59_RS23745 (14686) | 14686..15588 | + | 903 | WP_187810333.1 | DUF1281 domain-containing protein | - |
| PJZ59_RS23750 (15585) | 15585..15896 | + | 312 | WP_032146222.1 | hypothetical protein | - |
| PJZ59_RS23755 (15973) | 15973..16656 | + | 684 | WP_187810332.1 | DNA methylase | - |
| PJZ59_RS23760 (16657) | 16657..16878 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| PJZ59_RS23765 (16808) | 16808..17326 | + | 519 | WP_285934433.1 | DUF1380 family protein | - |
| PJZ59_RS23770 (17371) | 17371..18141 | + | 771 | WP_187810331.1 | hypothetical protein | - |
| PJZ59_RS23775 (18553) | 18553..18978 | + | 426 | WP_001546490.1 | antirestriction protein | - |
| PJZ59_RS23780 (19025) | 19025..19447 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| PJZ59_RS23785 (19444) | 19444..19635 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| PJZ59_RS23790 (19914) | 19914..20162 | - | 249 | WP_071587243.1 | hypothetical protein | - |
| PJZ59_RS23795 (20479) | 20479..20775 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| PJZ59_RS23800 (20886) | 20886..21707 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| PJZ59_RS23805 (22004) | 22004..22606 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| PJZ59_RS23810 (22927) | 22927..23310 | + | 384 | WP_001151529.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PJZ59_RS23815 (23502) | 23502..24149 | + | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| PJZ59_RS23820 (24269) | 24269..24496 | + | 228 | WP_000589556.1 | conjugal transfer relaxosome protein TraY | - |
| PJZ59_RS23825 (24530) | 24530..24892 | + | 363 | WP_012881131.1 | type IV conjugative transfer system pilin TraA | - |
| PJZ59_RS23830 (24907) | 24907..25218 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| PJZ59_RS23835 (25240) | 25240..25806 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| PJZ59_RS23840 (25793) | 25793..26521 | + | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| PJZ59_RS23845 (26521) | 26521..27948 | + | 1428 | WP_012881130.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PJZ59_RS23850 (27938) | 27938..28528 | + | 591 | WP_012881129.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PJZ59_RS23855 (28515) | 28515..28835 | + | 321 | WP_012881128.1 | conjugal transfer protein TrbD | - |
| PJZ59_RS23860 (28832) | 28832..29347 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PJZ59_RS23865 (29482) | 29482..29703 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| PJZ59_RS23870 (29696) | 29696..30172 | + | 477 | WP_012881127.1 | hypothetical protein | - |
| PJZ59_RS23875 (30271) | 30271..30489 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| PJZ59_RS23880 (30517) | 30517..30864 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| PJZ59_RS23885 (30990) | 30990..33620 | + | 2631 | WP_000069772.1 | type IV secretion system protein TraC | - |
| PJZ59_RS23890 (33617) | 33617..34003 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| PJZ59_RS23895 (34000) | 34000..34632 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| PJZ59_RS23900 (34629) | 34629..35621 | + | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| PJZ59_RS23905 (35651) | 35651..35956 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| PJZ59_RS23910 (35965) | 35965..36603 | + | 639 | WP_012881126.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PJZ59_RS23915 (36600) | 36600..38450 | + | 1851 | WP_032251003.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PJZ59_RS23920 (38477) | 38477..38734 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| PJZ59_RS23925 (38727) | 38727..39470 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PJZ59_RS23930 (39484) | 39484..39825 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| PJZ59_RS23935 (39806) | 39806..40141 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| PJZ59_RS23940 (40222) | 40222..40506 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PJZ59_RS23945 (40493) | 40493..41038 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PJZ59_RS23950 (40968) | 40968..41315 | + | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| PJZ59_RS23955 (41296) | 41296..41688 | + | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| PJZ59_RS23960 (41675) | 41675..43048 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| PJZ59_RS23965 (43045) | 43045..45870 | + | 2826 | WP_012881124.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PJZ59_RS23970 (45867) | 45867..46376 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| PJZ59_RS23975 (46390) | 46390..47121 | + | 732 | WP_012881123.1 | conjugal transfer complement resistance protein TraT | - |
| PJZ59_RS23980 (47324) | 47324..48061 | + | 738 | WP_012881122.1 | hypothetical protein | - |
| PJZ59_RS23985 (48112) | 48112..50346 | + | 2235 | WP_285934404.1 | type IV conjugative transfer system coupling protein TraD | - |
| PJZ59_RS23990 (50346) | 50346..55616 | + | 5271 | WP_000948349.1 | Multifunctional conjugation protein TraI | Relaxase |
| PJZ59_RS23995 (55636) | 55636..56382 | + | 747 | WP_059338983.1 | conjugal transfer pilus acetylase TraX | - |
| PJZ59_RS24000 (56441) | 56441..57301 | + | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| PJZ59_RS24005 (57404) | 57404..57964 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| PJZ59_RS24010 (58093) | 58093..58305 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| PJZ59_RS24015 (58550) | 58550..59011 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| PJZ59_RS24020 (59057) | 59057..59266 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| PJZ59_RS24025 (59304) | 59304..59894 | + | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| PJZ59_RS24030 (60049) | 60049..60522 | + | 474 | WP_187810334.1 | hypothetical protein | - |
| - (60665) | 60665..60724 | - | 60 | NuclAT_0 | - | - |
| - (60665) | 60665..60724 | - | 60 | NuclAT_0 | - | - |
| - (60665) | 60665..60724 | - | 60 | NuclAT_0 | - | - |
| - (60665) | 60665..60724 | - | 60 | NuclAT_0 | - | - |
| PJZ59_RS24035 (60769) | 60769..60918 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| PJZ59_RS24040 (61203) | 61203..61451 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| PJZ59_RS24045 (61566) | 61566..61750 | + | 185 | Protein_82 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|