MGE detailed information
MGE type: IScluster/Tn MGE length: 5294 bp
Accession: NZ_CP127380 Location: 8089..13382 Organism: Xanthomonas fragariae strain LMG 703 Replicon: plasmid pB
Accession: NZ_CP127380 Location: 8089..13382 Organism: Xanthomonas fragariae strain LMG 703 Replicon: plasmid pB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OW158_RS20175 (OW158_20175) | 4169..4468 | - | 300 | WP_134656643.1 | hypothetical protein | - |
| OW158_RS20180 (OW158_20180) | 4583..4891 | - | 309 | WP_002804321.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OW158_RS20185 (OW158_20185) | 4912..5367 | - | 456 | WP_231892773.1 | hypothetical protein | - |
| OW158_RS20190 (OW158_20190) | 5542..5793 | + | 252 | WP_002804328.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| OW158_RS20195 (OW158_20195) | 5790..6185 | + | 396 | WP_002804329.1 | type II toxin-antitoxin system VapC family toxin | - |
| OW158_RS20200 (OW158_20200) | 6191..6606 | + | 416 | Protein_11 | hypothetical protein | - |
| OW158_RS20205 (OW158_20205) | 6873..7274 | - | 402 | WP_002804331.1 | hypothetical protein | - |
| OW158_RS20210 (OW158_20210) | 7326..7769 | + | 444 | WP_145954081.1 | hypothetical protein | - |
| OW158_RS20215 (OW158_20215) | 7776..7940 | + | 165 | WP_156775378.1 | hypothetical protein | - |
| OW158_RS20220 (OW158_20220) | 8128..8703 | + | 576 | WP_040762337.1 | Tn3 family transposase ISPsy42 | Transposase |
| OW158_RS20225 (OW158_20225) | 8714..8980 | + | 267 | WP_002804333.1 | hypothetical protein | - |
| OW158_RS20230 (OW158_20230) | 9178..10830 | + | 1653 | WP_231892771.1 | AAA family ATPase | - |
| OW158_RS20235 (OW158_20235) | 10899..11081 | + | 183 | WP_134656646.1 | hypothetical protein | - |
| OW158_RS20240 (OW158_20240) | 11267..11551 | - | 285 | WP_002804295.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OW158_RS20245 (OW158_20245) | 11539..11817 | - | 279 | WP_002804296.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| OW158_RS20250 (OW158_20250) | 12100..12789 | + | 690 | WP_231895784.1 | antitoxin VbhA family protein | - |
| OW158_RS20255 (OW158_20255) | 12831..13382 | + | 552 | WP_088057164.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| OW158_RS20260 (OW158_20260) | 13485..14117 | + | 633 | WP_088057159.1 | ParA family protein | - |
| OW158_RS20265 (OW158_20265) | 14110..14472 | + | 363 | WP_088057160.1 | hypothetical protein | - |
| OW158_RS20270 (OW158_20270) | 14555..14878 | + | 324 | WP_088057161.1 | ParC family partition-associated protein | - |
| OW158_RS20275 (OW158_20275) | 15062..16474 | + | 1413 | WP_108817190.1 | replication protein | - |
| OW158_RS20280 (OW158_20280) | 16689..17003 | + | 315 | WP_108780278.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|