MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 27159 bp
Accession: NZ_CP127380 Location: 1..27159 Organism: Xanthomonas fragariae strain LMG 703 Replicon: plasmid pB
Accession: NZ_CP127380 Location: 1..27159 Organism: Xanthomonas fragariae strain LMG 703 Replicon: plasmid pB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OW158_RS20150 (OW158_20150) | 468..965 | + | 498 | WP_231892769.1 | antitoxin VbhA family protein | - |
| OW158_RS20155 (OW158_20155) | 962..1570 | + | 609 | WP_002804317.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| OW158_RS20160 (OW158_20160) | 1613..1888 | + | 276 | Protein_3 | ParA family protein | - |
| OW158_RS20165 (OW158_20165) | 1890..2318 | - | 429 | WP_002804319.1 | DUF3757 domain-containing protein | - |
| OW158_RS20170 (OW158_20170) | 2520..3515 | - | 996 | WP_286027252.1 | hypothetical protein | - |
| OW158_RS20175 (OW158_20175) | 4169..4468 | - | 300 | WP_134656643.1 | hypothetical protein | - |
| OW158_RS20180 (OW158_20180) | 4583..4891 | - | 309 | WP_002804321.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OW158_RS20185 (OW158_20185) | 4912..5367 | - | 456 | WP_231892773.1 | hypothetical protein | - |
| OW158_RS20190 (OW158_20190) | 5542..5793 | + | 252 | WP_002804328.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| OW158_RS20195 (OW158_20195) | 5790..6185 | + | 396 | WP_002804329.1 | type II toxin-antitoxin system VapC family toxin | - |
| OW158_RS20200 (OW158_20200) | 6191..6606 | + | 416 | Protein_11 | hypothetical protein | - |
| OW158_RS20205 (OW158_20205) | 6873..7274 | - | 402 | WP_002804331.1 | hypothetical protein | - |
| OW158_RS20210 (OW158_20210) | 7326..7769 | + | 444 | WP_145954081.1 | hypothetical protein | - |
| OW158_RS20215 (OW158_20215) | 7776..7940 | + | 165 | WP_156775378.1 | hypothetical protein | - |
| OW158_RS20220 (OW158_20220) | 8128..8703 | + | 576 | WP_040762337.1 | Tn3 family transposase ISPsy42 | Transposase |
| OW158_RS20225 (OW158_20225) | 8714..8980 | + | 267 | WP_002804333.1 | hypothetical protein | - |
| OW158_RS20230 (OW158_20230) | 9178..10830 | + | 1653 | WP_231892771.1 | AAA family ATPase | - |
| OW158_RS20235 (OW158_20235) | 10899..11081 | + | 183 | WP_134656646.1 | hypothetical protein | - |
| OW158_RS20240 (OW158_20240) | 11267..11551 | - | 285 | WP_002804295.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OW158_RS20245 (OW158_20245) | 11539..11817 | - | 279 | WP_002804296.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| OW158_RS20250 (OW158_20250) | 12100..12789 | + | 690 | WP_231895784.1 | antitoxin VbhA family protein | - |
| OW158_RS20255 (OW158_20255) | 12831..13382 | + | 552 | WP_088057164.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| OW158_RS20260 (OW158_20260) | 13485..14117 | + | 633 | WP_088057159.1 | ParA family protein | - |
| OW158_RS20265 (OW158_20265) | 14110..14472 | + | 363 | WP_088057160.1 | hypothetical protein | - |
| OW158_RS20270 (OW158_20270) | 14555..14878 | + | 324 | WP_088057161.1 | ParC family partition-associated protein | - |
| OW158_RS20275 (OW158_20275) | 15062..16474 | + | 1413 | WP_108817190.1 | replication protein | - |
| OW158_RS20280 (OW158_20280) | 16689..17003 | + | 315 | WP_108780278.1 | hypothetical protein | - |
| OW158_RS20285 (OW158_20285) | 17623..18705 | - | 1083 | WP_231895788.1 | Type IV secretion system protein VirB6 | VF |
| OW158_RS20290 (OW158_20290) | 18717..18962 | - | 246 | WP_088057147.1 | hypothetical protein | VF |
| OW158_RS20295 (OW158_20295) | 18959..19399 | - | 441 | WP_088057148.1 | hypothetical protein | - |
| OW158_RS20300 (OW158_20300) | 19409..20119 | - | 711 | WP_088057149.1 | Type IV secretion system protein virB5 | VF |
| OW158_RS20305 (OW158_20305) | 20478..20930 | - | 453 | WP_088057150.1 | hypothetical protein | - |
| OW158_RS20310 (OW158_20310) | 20933..21661 | - | 729 | WP_088057151.1 | hypothetical protein | - |
| OW158_RS20315 (OW158_20315) | 21672..22061 | - | 390 | WP_088057152.1 | hypothetical protein | - |
| OW158_RS20320 (OW158_20320) | 22342..22875 | + | 534 | WP_199913062.1 | hypothetical protein | Relaxase |
| OW158_RS20325 (OW158_20325) | 22865..25231 | + | 2367 | WP_108862514.1 | hypothetical protein | - |
| OW158_RS20330 (OW158_20330) | 25391..25609 | + | 219 | WP_088057162.1 | plasmid partition protein ParG | - |
| OW158_RS20335 (OW158_20335) | 25709..26068 | + | 360 | WP_088057155.1 | hypothetical protein | - |
| OW158_RS20340 (OW158_20340) | 26314..26727 | - | 414 | WP_088057156.1 | hypothetical protein | - |
| OW158_RS20345 (OW158_20345) | 26803..27096 | - | 294 | WP_088057157.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|