MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 29233 bp
Accession: NZ_CP127379 Location: 1..29233 Organism: Xanthomonas fragariae strain LMG 703 Replicon: plasmid pA
Accession: NZ_CP127379 Location: 1..29233 Organism: Xanthomonas fragariae strain LMG 703 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OW158_RS19975 (OW158_19975) | 643..1353 | + | 711 | WP_002805311.1 | type IV secretion system protein | - |
| OW158_RS19980 (OW158_19980) | 1368..1661 | + | 294 | WP_002805313.1 | EexN family lipoprotein | - |
| OW158_RS19985 (OW158_19985) | 1673..2623 | + | 951 | WP_002805314.1 | hypothetical protein | VF |
| OW158_RS19990 (OW158_19990) | 2922..3800 | + | 879 | WP_002805316.1 | Type IV secretion system protein virB8 | VF |
| OW158_RS19995 (OW158_19995) | 3797..4606 | + | 810 | WP_082244228.1 | Type IV secretion system protein virB9 | VF |
| OW158_RS20000 (OW158_20000) | 4603..5817 | + | 1215 | WP_002805319.1 | hypothetical protein | VF |
| OW158_RS20005 (OW158_20005) | 5817..6878 | + | 1062 | WP_002805320.1 | Type IV secretion system protein VirB11 | VF |
| OW158_RS20010 (OW158_20010) | 6892..8811 | + | 1920 | WP_065975500.1 | hypothetical protein | VF |
| OW158_RS20015 (OW158_20015) | 8824..10668 | + | 1845 | WP_065975501.1 | hypothetical protein | - |
| OW158_RS20020 (OW158_20020) | 10665..11288 | + | 624 | WP_002805358.1 | transglycosylase SLT domain-containing protein | - |
| OW158_RS20025 (OW158_20025) | 11330..11554 | + | 225 | WP_002805360.1 | DUF3717 domain-containing protein | - |
| OW158_RS20030 (OW158_20030) | 11715..12290 | - | 576 | WP_065975506.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| OW158_RS20035 (OW158_20035) | 12332..13021 | - | 690 | WP_065975502.1 | antitoxin VbhA family protein | - |
| OW158_RS20040 (OW158_20040) | 13236..13535 | + | 300 | WP_002805369.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| OW158_RS20045 (OW158_20045) | 13522..13815 | + | 294 | WP_002805372.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OW158_RS20050 (OW158_20050) | 13893..14069 | + | 177 | WP_156775376.1 | hypothetical protein | - |
| OW158_RS20055 (OW158_20055) | 14066..14290 | - | 225 | WP_002805375.1 | hypothetical protein | - |
| OW158_RS20060 (OW158_20060) | 14511..15263 | + | 753 | WP_065975503.1 | hypothetical protein | - |
| OW158_RS20065 (OW158_20065) | 15767..16366 | - | 600 | WP_065975504.1 | hypothetical protein | - |
| OW158_RS20070 (OW158_20070) | 17024..18043 | - | 1020 | WP_052032118.1 | hypothetical protein | Relaxase |
| OW158_RS20075 (OW158_20075) | 18030..18581 | - | 552 | WP_065975505.1 | hypothetical protein | Relaxase |
| OW158_RS20080 (OW158_20080) | 18845..19378 | - | 534 | WP_145954079.1 | hypothetical protein | - |
| OW158_RS20085 (OW158_20085) | 19353..19646 | - | 294 | WP_002805642.1 | hypothetical protein | - |
| OW158_RS20090 (OW158_20090) | 19855..20124 | - | 270 | WP_145954078.1 | hypothetical protein | - |
| OW158_RS20095 (OW158_20095) | 20111..21163 | - | 1053 | WP_065975495.1 | ParB/RepB/Spo0J family partition protein | - |
| OW158_RS20100 (OW158_20100) | 21156..21956 | - | 801 | WP_065975496.1 | ParA family protein | - |
| OW158_RS20105 (OW158_20105) | 21967..22281 | - | 315 | WP_065975497.1 | transcriptional regulator KorA | - |
| OW158_RS20110 (OW158_20110) | 22940..23815 | - | 876 | WP_002805689.1 | plasmid replication initiator TrfA | - |
| OW158_RS20115 (OW158_20115) | 24064..24669 | - | 606 | WP_065975498.1 | hypothetical protein | - |
| OW158_RS20120 (OW158_20120) | 24904..25812 | + | 909 | WP_002805094.1 | DUF3991 and TOPRIM domain-containing protein | - |
| OW158_RS20125 (OW158_20125) | 25853..26314 | + | 462 | WP_002805097.1 | hypothetical protein | - |
| OW158_RS20130 (OW158_20130) | 26481..26741 | + | 261 | WP_145954080.1 | hypothetical protein | - |
| OW158_RS20135 (OW158_20135) | 26738..27061 | + | 324 | WP_002805100.1 | TrbC/VirB2 family protein | - |
| OW158_RS20140 (OW158_20140) | 27075..27437 | + | 363 | WP_002805102.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|