MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 35873 bp
Accession: NZ_CP127378 Location: 2036507..2072379 Organism: Xanthomonas fragariae strain LMG 703 Replicon: chromosome
Accession: NZ_CP127378 Location: 2036507..2072379 Organism: Xanthomonas fragariae strain LMG 703 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OW158_RS09495 (OW158_09495) | 2031552..2032388 | + | 837 | WP_088056827.1 | carbohydrate ABC transporter permease | - |
| OW158_RS09500 (OW158_09500) | 2032415..2035552 | + | 3138 | WP_088057117.1 | discoidin domain-containing protein | - |
| OW158_RS09505 (OW158_09505) | 2035812..2036566 | + | 755 | Protein_1817 | transposase | - |
| OW158_RS09510 (OW158_09510) | 2036750..2038117 | - | 1368 | WP_088057118.1 | IS5 family transposase IS1478 | Transposase |
| OW158_RS09515 (OW158_09515) | 2038248..2038488 | + | 241 | Protein_1819 | endonuclease/exonuclease/phosphatase family protein | - |
| OW158_RS09520 (OW158_09520) | 2038638..2039858 | - | 1221 | WP_172402121.1 | TraB/GumN family protein | - |
| OW158_RS09525 (OW158_09525) | 2039863..2040261 | - | 399 | WP_002805788.1 | hypothetical protein | - |
| OW158_RS09530 (OW158_09530) | 2040266..2041150 | - | 885 | WP_002805787.1 | carbon-nitrogen hydrolase | - |
| OW158_RS09535 (OW158_09535) | 2041228..2042262 | - | 1035 | WP_002805785.1 | agmatine deiminase family protein | - |
| OW158_RS09540 (OW158_09540) | 2042488..2042790 | - | 303 | WP_002805783.1 | hypothetical protein | - |
| OW158_RS09545 (OW158_09545) | 2043036..2043161 | - | 126 | WP_002805782.1 | type B 50S ribosomal protein L36 | - |
| OW158_RS09550 (OW158_09550) | 2043339..2044022 | + | 684 | WP_002805781.1 | (d)CMP kinase | - |
| OW158_RS09555 (OW158_09555) | 2044207..2045892 | + | 1686 | WP_002805780.1 | 30S ribosomal protein S1 | - |
| OW158_RS09560 (OW158_09560) | 2045981..2046292 | + | 312 | WP_002805779.1 | integration host factor subunit beta | - |
| OW158_RS09565 (OW158_09565) | 2046361..2046666 | + | 306 | WP_002805777.1 | LapA family protein | - |
| OW158_RS09570 (OW158_09570) | 2046673..2047851 | + | 1179 | WP_002805775.1 | lipopolysaccharide assembly protein LapB | - |
| OW158_RS09575 (OW158_09575) | 2047851..2048819 | + | 969 | WP_002805773.1 | glycosyltransferase family 4 protein | - |
| OW158_RS09580 (OW158_09580) | 2048833..2050740 | + | 1908 | WP_002805772.1 | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | VF |
| OW158_RS09585 (OW158_09585) | 2050740..2051633 | + | 894 | WP_002805770.1 | UTP--glucose-1-phosphate uridylyltransferase | VF |
| OW158_RS09590 (OW158_09590) | 2051787..2052071 | + | 285 | Protein_1834 | cation:proton antiporter | - |
| OW158_RS09595 (OW158_09595) | 2052180..2052826 | + | 647 | Protein_1835 | IS3 family transposase IS1404 | Transposase |
| OW158_RS09600 (OW158_09600) | 2052853..2053777 | - | 925 | Protein_1836 | IS3 family transposase ISXac3 | Transposase |
| OW158_RS09605 (OW158_09605) | 2053841..2054935 | + | 1095 | Protein_1837 | IS5 family transposase IS1478 | Transposase |
| OW158_RS09610 (OW158_09610) | 2055079..2056448 | + | 1370 | Protein_1838 | IS5 family transposase IS1478 | Transposase |
| OW158_RS09615 (OW158_09615) | 2056808..2057128 | - | 321 | WP_002805766.1 | DUF1244 domain-containing protein | - |
| OW158_RS09620 (OW158_09620) | 2057178..2058062 | + | 885 | WP_002805762.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| OW158_RS09625 (OW158_09625) | 2058166..2059623 | + | 1458 | WP_002805758.1 | IMP dehydrogenase | - |
| OW158_RS09630 (OW158_09630) | 2059749..2061314 | + | 1566 | WP_002805756.1 | glutamine-hydrolyzing GMP synthase | - |
| OW158_RS09635 (OW158_09635) | 2061622..2062833 | + | 1212 | WP_002805754.1 | Prophage integrase IntA ; Integrase | Integrase |
| OW158_RS09640 (OW158_09640) | 2062917..2063174 | - | 258 | WP_002805752.1 | AlpA family phage regulatory protein | - |
| OW158_RS09645 (OW158_09645) | 2063366..2064733 | + | 1368 | WP_088057118.1 | IS5 family transposase IS1478 | Transposase |
| OW158_RS09650 (OW158_09650) | 2064807..2065802 | - | 996 | WP_231892738.1 | LuxR family transcriptional regulator | - |
| OW158_RS09655 (OW158_09655) | 2065893..2066126 | + | 234 | WP_002805742.1 | hypothetical protein | - |
| OW158_RS09660 (OW158_09660) | 2066130..2067008 | + | 879 | WP_002805739.1 | helicase RepA family protein | - |
| OW158_RS09665 (OW158_09665) | 2066980..2067867 | + | 888 | WP_172404498.1 | replication protein C, IncQ-type | - |
| OW158_RS09670 (OW158_09670) | 2068529..2068810 | + | 282 | WP_002805735.1 | TraK family protein | - |
| OW158_RS09675 (OW158_09675) | 2069222..2069476 | + | 255 | WP_002805732.1 | Arc family DNA-binding protein | Antitoxin Detail |
| OW158_RS09680 (OW158_09680) | 2069473..2069892 | + | 420 | WP_002805728.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| OW158_RS09685 (OW158_09685) | 2070049..2070660 | + | 612 | Protein_1853 | P-type conjugative transfer protein TrbJ | - |
| OW158_RS09690 (OW158_09690) | 2070749..2070991 | + | 243 | Protein_1854 | IS3 family transposase ISXac3 | Transposase |
| OW158_RS09695 (OW158_09695) | 2071109..2072475 | + | 1367 | Protein_1855 | IS5 family transposase IS1478 | Transposase |
| OW158_RS09700 (OW158_09700) | 2072498..2073403 | + | 906 | Protein_1856 | IS3 family transposase | - |
| OW158_RS09705 (OW158_09705) | 2073648..2075023 | - | 1376 | Protein_1857 | IS5 family transposase | - |
| OW158_RS09710 (OW158_09710) | 2075428..2076300 | - | 873 | WP_145954097.1 | hypothetical protein | - |
| OW158_RS09715 (OW158_09715) | 2077169..2077170 | - | 2 | WP_088056830.1 | IS5 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|