MGE detailed information
MGE type: Genomic_island MGE length: 56654 bp
Accession: NZ_CP127316 Location: 4591695..4648348 Organism: Escherichia coli strain Ch1 Replicon: chromosome
Accession: NZ_CP127316 Location: 4591695..4648348 Organism: Escherichia coli strain Ch1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRM71_RS22345 (4587021) | 4587021..4587377 | - | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| QRM71_RS22350 (4587370) | 4587370..4587648 | - | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| QRM71_RS22355 (4587753) | 4587753..4589465 | - | 1713 | Protein_4365 | flagellar biosynthesis protein FlhA | - |
| QRM71_RS22360 (4589437) | 4589437..4590222 | + | 786 | WP_073268583.1 | putative lateral flagellar export/assembly protein LafU | - |
| QRM71_RS22365 (4590344) | 4590344..4591347 | + | 1004 | Protein_4367 | DNA polymerase IV | - |
| QRM71_RS22370 (4591399) | 4591399..4591692 | + | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | - |
| QRM71_RS22375 (4591695) | 4591695..4592093 | + | 399 | WP_001521903.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
| QRM71_RS22380 (4592103) | 4592103..4592555 | + | 453 | WP_023144376.1 | GNAT family N-acetyltransferase | - |
| QRM71_RS22385 (4592800) | 4592800..4593006 | + | 207 | Protein_4371 | RtcB family protein | - |
| QRM71_RS22390 (4593002) | 4593002..4593354 | + | 353 | Protein_4372 | peptide chain release factor H | - |
| QRM71_RS22395 (4593411) | 4593411..4594868 | - | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| QRM71_RS22400 (4595129) | 4595129..4595587 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4596183) | 4596183..4596263 | + | 81 | NuclAT_10 | - | - |
| - (4596183) | 4596183..4596263 | + | 81 | NuclAT_10 | - | - |
| - (4596183) | 4596183..4596263 | + | 81 | NuclAT_10 | - | - |
| - (4596183) | 4596183..4596263 | + | 81 | NuclAT_10 | - | - |
| QRM71_RS22405 (4595679) | 4595679..4596923 | + | 1245 | WP_032353095.1 | esterase FrsA | - |
| QRM71_RS22410 (4596981) | 4596981..4597382 | + | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| QRM71_RS22415 (4597421) | 4597421..4598476 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| QRM71_RS22420 (4598764) | 4598764..4599867 | + | 1104 | WP_285978820.1 | glutamate 5-kinase | - |
| QRM71_RS22425 (4599879) | 4599879..4601132 | + | 1254 | WP_001521908.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QRM71_RS22435 (4601337) | 4601337..4601495 | - | 159 | Protein_4380 | integrase | - |
| QRM71_RS22440 (4601587) | 4601587..4601689 | - | 103 | Protein_4381 | helix-turn-helix domain-containing protein | - |
| QRM71_RS22445 (4601686) | 4601686..4602156 | - | 471 | WP_000201185.1 | hypothetical protein | - |
| QRM71_RS22450 (4602503) | 4602503..4605712 | - | 3210 | WP_285978821.1 | RNA-directed DNA polymerase | - |
| QRM71_RS22455 (4606028) | 4606028..4606810 | + | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| QRM71_RS22460 (4606797) | 4606797..4607717 | + | 921 | WP_000365809.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QRM71_RS22465 (4608151) | 4608151..4609035 | - | 885 | WP_001119037.1 | HTH-type transcriptional regulator PgrR | VF |
| QRM71_RS22470 (4609300) | 4609300..4610357 | + | 1058 | Protein_4387 | alpha/beta hydrolase | - |
| QRM71_RS22475 (4610499) | 4610499..4611626 | + | 1128 | WP_001550663.1 | MFS transporter | - |
| QRM71_RS22480 (4611805) | 4611805..4612758 | - | 954 | WP_279956833.1 | molybdenum cofactor insertion chaperone PaoD | - |
| QRM71_RS22485 (4612768) | 4612768..4615515 | - | 2748 | WP_001595350.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| QRM71_RS22490 (4615512) | 4615512..4616201 | - | 690 | WP_000070677.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| QRM71_RS22495 (4616607) | 4616607..4617221 | + | 615 | WP_001019920.1 | YagU family protein | - |
| QRM71_RS22500 (4617470) | 4617470..4617799 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| QRM71_RS22505 (4618112) | 4618112..4618822 | - | 711 | WP_001586708.1 | putative fimbrial chaperone EcpE | VF |
| QRM71_RS22510 (4618791) | 4618791..4620434 | - | 1644 | WP_001521920.1 | Fimbria adhesin EcpD | VF |
| QRM71_RS22515 (4620424) | 4620424..4622949 | - | 2526 | WP_001131068.1 | putative outer membrane usher protein EcpC | VF |
| QRM71_RS22520 (4622975) | 4622975..4623643 | - | 669 | WP_001521922.1 | putative fimbrial chaperone EcpB | VF |
| QRM71_RS22525 (4623700) | 4623700..4624287 | - | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| QRM71_RS22530 (4624362) | 4624362..4624904 | - | 543 | WP_001305433.1 | HTH-type transcriptional regulator EcpR | VF |
| QRM71_RS22535 (4625728) | 4625728..4625953 | + | 226 | Protein_4400 | protein YkgL | - |
| QRM71_RS22540 (4625988) | 4625988..4626128 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| QRM71_RS22545 (4626128) | 4626128..4626391 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| QRM71_RS22550 (4626721) | 4626721..4626804 | - | 84 | Protein_4403 | hypothetical protein | - |
| QRM71_RS22555 (4627323) | 4627323..4628465 | - | 1143 | WP_001595351.1 | NADH-dependent flavin oxidoreductase | - |
| QRM71_RS22560 (4628639) | 4628639..4629559 | - | 921 | WP_032352371.1 | alpha/beta hydrolase | - |
| QRM71_RS22565 (4629716) | 4629716..4630642 | + | 927 | WP_001328123.1 | HTH-type transcriptional regulator PgrR | VF |
| QRM71_RS22570 (4630842) | 4630842..4631735 | + | 894 | WP_001521923.1 | HTH-type transcriptional regulator PgrR | VF |
| QRM71_RS22575 (4631766) | 4631766..4632755 | - | 990 | WP_001172288.1 | aldo/keto reductase | - |
| QRM71_RS22580 (4632782) | 4632782..4633633 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| QRM71_RS22585 (4634199) | 4634199..4638449 | + | 4251 | WP_285978822.1 | hypothetical protein | VF |
| QRM71_RS22590 (4638574) | 4638574..4639431 | - | 858 | WP_001309280.1 | Right origin-binding protein | VF |
| QRM71_RS22595 (4639679) | 4639679..4640548 | + | 870 | WP_001309281.1 | aldo/keto reductase | - |
| QRM71_RS22600 (4640708) | 4640708..4641301 | - | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| QRM71_RS22605 (4641313) | 4641313..4641549 | - | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| QRM71_RS22610 (4641658) | 4641658..4642983 | - | 1326 | WP_001046306.1 | reactive chlorine resistance oxidoreductase RclA | - |
| QRM71_RS22615 (4643210) | 4643210..4644064 | + | 855 | WP_000339603.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| QRM71_RS22620 (4644592) | 4644592..4645311 | + | 720 | WP_001102122.1 | (Fe-S)-binding protein | - |
| QRM71_RS22625 (4645322) | 4645322..4646749 | + | 1428 | WP_000023924.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| QRM71_RS22630 (4646742) | 4646742..4647437 | + | 696 | WP_001545254.1 | lactate utilization protein C | - |
| QRM71_RS22635 (4647680) | 4647680..4648348 | - | 669 | WP_279956830.1 | protein YkgH | - |
| QRM71_RS22640 (4648559) | 4648559..4650229 | - | 1671 | WP_001159140.1 | choline dehydrogenase | - |
| QRM71_RS22645 (4650243) | 4650243..4651715 | - | 1473 | WP_000089106.1 | betaine-aldehyde dehydrogenase | - |
| QRM71_RS22650 (4651729) | 4651729..4652316 | - | 588 | WP_032352374.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|