MGE detailed information
MGE type: Genomic_island MGE length: 35334 bp
Accession: NZ_CP127316 Location: 4153723..4189056 Organism: Escherichia coli strain Ch1 Replicon: chromosome
Accession: NZ_CP127316 Location: 4153723..4189056 Organism: Escherichia coli strain Ch1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRM71_RS20300 (4149090) | 4149090..4150034 | - | 945 | WP_001521641.1 | DNA-binding transcriptional regulator DsdC | - |
| QRM71_RS20305 (4150252) | 4150252..4151589 | + | 1338 | WP_001521642.1 | D-serine transporter DsdX | - |
| QRM71_RS20310 (4151607) | 4151607..4152938 | + | 1332 | WP_001521644.1 | D-serine ammonia-lyase | - |
| QRM71_RS20315 (4153114) | 4153114..4154311 | + | 1198 | Protein_3967 | IS3 family transposase | - |
| QRM71_RS20320 (4154348) | 4154348..4154449 | + | 102 | Protein_3968 | hypothetical protein | - |
| QRM71_RS20325 (4154461) | 4154461..4155474 | + | 1014 | WP_021541786.1 | aldose 1-epimerase family protein | - |
| QRM71_RS20330 (4155726) | 4155726..4155920 | - | 195 | Protein_3970 | AlpA family transcriptional regulator | - |
| QRM71_RS20335 (4155989) | 4155989..4156564 | - | 576 | WP_000991584.1 | hypothetical protein | - |
| QRM71_RS20340 (4156812) | 4156812..4157378 | - | 567 | WP_021541787.1 | inovirus-type Gp2 protein | - |
| QRM71_RS20345 (4158607) | 4158607..4158956 | + | 350 | Protein_3973 | IS21 family transposase | - |
| QRM71_RS20350 (4158986) | 4158986..4159114 | - | 129 | Protein_3974 | IS256 family transposase | - |
| QRM71_RS20355 (4159383) | 4159383..4159823 | - | 441 | WP_000038138.1 | H-NS histone family protein | - |
| QRM71_RS20360 (4160044) | 4160044..4160819 | + | 776 | Protein_3976 | transposase | - |
| QRM71_RS20365 (4160952) | 4160952..4161526 | - | 575 | Protein_3977 | transposase | - |
| QRM71_RS20370 (4161580) | 4161580..4162458 | - | 879 | WP_000769116.1 | restriction endonuclease | - |
| QRM71_RS20375 (4162786) | 4162786..4163516 | - | 731 | Protein_3979 | inovirus Gp2 family protein | - |
| QRM71_RS20380 (4165012) | 4165012..4166142 | - | 1131 | WP_021541790.1 | hypothetical protein | - |
| QRM71_RS20385 (4166327) | 4166327..4167211 | + | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| QRM71_RS20390 (4167414) | 4167414..4168094 | + | 681 | WP_136695573.1 | WYL domain-containing protein | - |
| QRM71_RS20395 (4168242) | 4168242..4168919 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QRM71_RS20400 (4168949) | 4168949..4169158 | + | 210 | WP_032150870.1 | DUF905 family protein | - |
| QRM71_RS20405 (4169248) | 4169248..4170066 | + | 819 | WP_094392407.1 | DUF932 domain-containing protein | - |
| QRM71_RS20410 (4170158) | 4170158..4170643 | + | 486 | WP_094392406.1 | antirestriction protein | - |
| QRM71_RS20415 (4170659) | 4170659..4171135 | + | 477 | WP_001560678.1 | RadC family protein | - |
| QRM71_RS20420 (4171198) | 4171198..4171419 | + | 222 | WP_077516876.1 | DUF987 domain-containing protein | - |
| QRM71_RS20425 (4171493) | 4171493..4171861 | + | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QRM71_RS20430 (4171951) | 4171951..4172328 | + | 378 | WP_001094443.1 | TA system toxin CbtA family protein | Toxin Detail |
| QRM71_RS20435 (4172325) | 4172325..4172813 | + | 489 | WP_000761685.1 | DUF5983 family protein | - |
| QRM71_RS20440 (4172833) | 4172833..4173030 | + | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| QRM71_RS20445 (4173115) | 4173115..4173258 | + | 144 | Protein_3993 | hypothetical protein | - |
| QRM71_RS20455 (4175154) | 4175154..4178669 | + | 3516 | WP_032352910.1 | helicase YjhR | - |
| QRM71_RS20460 (4178980) | 4178980..4179852 | - | 873 | WP_024009496.1 | HNH endonuclease | - |
| QRM71_RS20465 (4179989) | 4179989..4180639 | + | 651 | WP_024009497.1 | HNH endonuclease | - |
| QRM71_RS20470 (4180647) | 4180647..4181627 | - | 981 | WP_032352908.1 | sialate O-acetylesterase | - |
| QRM71_RS20475 (4181692) | 4181692..4182798 | - | 1107 | WP_032352907.1 | N-acetylneuraminate epimerase | - |
| QRM71_RS20480 (4182818) | 4182818..4183534 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QRM71_RS20485 (4184986) | 4184986..4185588 | + | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| QRM71_RS20490 (4186066) | 4186066..4186662 | + | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| QRM71_RS20495 (4187142) | 4187142..4187690 | + | 549 | WP_000695560.1 | Type-1 fimbrial protein, A chain | VF |
| QRM71_RS20500 (4187755) | 4187755..4188294 | + | 540 | WP_000824119.1 | putative major fimbrial subunit LpfA | VF |
| QRM71_RS20505 (4188331) | 4188331..4189056 | + | 726 | WP_000066573.1 | Chaperone protein FimC | VF |
| QRM71_RS20510 (4189123) | 4189123..4191759 | + | 2637 | WP_045146180.1 | fimbrial usher FimD | - |
| QRM71_RS20515 (4191769) | 4191769..4192299 | + | 531 | WP_089619946.1 | type 1 fimbria minor subunit FimF | - |
| QRM71_RS20520 (4192312) | 4192312..4192815 | + | 504 | WP_032353220.1 | type 1 fimbria minor subunit FimG | - |
| QRM71_RS20525 (4192835) | 4192835..4193737 | + | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|