MGE detailed information
MGE type: Genomic_island MGE length: 48725 bp
Accession: NZ_CP127316 Location: 3912856..3961580 Organism: Escherichia coli strain Ch1 Replicon: chromosome
Accession: NZ_CP127316 Location: 3912856..3961580 Organism: Escherichia coli strain Ch1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRM71_RS19080 (3909262) | 3909262..3909981 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QRM71_RS19085 (3909978) | 3909978..3911609 | - | 1632 | WP_032352794.1 | sensor histidine kinase | - |
| QRM71_RS19090 (3911789) | 3911789..3912019 | + | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QRM71_RS19095 (3912031) | 3912031..3912303 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QRM71_RS19100 (3912532) | 3912532..3912828 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| QRM71_RS19105 (3912856) | 3912856..3913029 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| QRM71_RS19110 (3913148) | 3913148..3914665 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QRM71_RS19115 (3914902) | 3914902..3916359 | - | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| QRM71_RS19120 (3916418) | 3916418..3918565 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QRM71_RS19125 (3918645) | 3918645..3919979 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QRM71_RS19130 (3920345) | 3920345..3921883 | - | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QRM71_RS19135 (3922632) | 3922632..3923473 | - | 842 | Protein_3736 | DUF4942 domain-containing protein | - |
| QRM71_RS19140 (3923558) | 3923558..3923755 | - | 198 | WP_085975623.1 | DUF957 domain-containing protein | - |
| QRM71_RS19145 (3923831) | 3923831..3923980 | - | 150 | Protein_3738 | DUF5983 family protein | - |
| QRM71_RS19150 (3923943) | 3923943..3924353 | - | 411 | WP_059309235.1 | TA system toxin CbtA family protein | Toxin Detail |
| QRM71_RS19155 (3924444) | 3924444..3924812 | - | 369 | WP_039023579.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QRM71_RS19160 (3924862) | 3924862..3925496 | - | 635 | Protein_3741 | antitoxin of toxin-antitoxin stability system | - |
| QRM71_RS19165 (3925515) | 3925515..3925736 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| QRM71_RS19170 (3925799) | 3925799..3926275 | - | 477 | WP_001366830.1 | RadC family protein | - |
| QRM71_RS19175 (3926291) | 3926291..3926770 | - | 480 | WP_000860074.1 | antirestriction protein | - |
| QRM71_RS19180 (3926852) | 3926852..3927670 | - | 819 | WP_001234688.1 | DUF932 domain-containing protein | - |
| QRM71_RS19185 (3927856) | 3927856..3928740 | - | 885 | WP_000010380.1 | YfjP family GTPase | - |
| QRM71_RS19190 (3928841) | 3928841..3930064 | + | 1224 | WP_032353838.1 | hypothetical protein | - |
| QRM71_RS19195 (3931293) | 3931293..3931541 | - | 249 | WP_000573215.1 | hypothetical protein | - |
| QRM71_RS19200 (3931647) | 3931647..3932378 | + | 732 | WP_021512249.1 | inovirus Gp2 family protein | - |
| QRM71_RS19205 (3932735) | 3932735..3933307 | + | 573 | WP_077248717.1 | hypothetical protein | - |
| QRM71_RS19210 (3933376) | 3933376..3933612 | + | 237 | WP_000958153.1 | AlpA family transcriptional regulator | - |
| QRM71_RS19215 (3933813) | 3933813..3934361 | + | 549 | WP_001167455.1 | hypothetical protein | - |
| QRM71_RS19220 (3934379) | 3934379..3934627 | - | 249 | WP_001323514.1 | ProQ/FINO family protein | - |
| QRM71_RS19225 (3934696) | 3934696..3934887 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| QRM71_RS19230 (3935260) | 3935260..3935951 | - | 692 | Protein_3755 | IS1 family transposase | - |
| QRM71_RS19235 (3936002) | 3936002..3936187 | + | 186 | Protein_3756 | transketolase family protein | - |
| QRM71_RS19240 (3936441) | 3936441..3936536 | + | 96 | Protein_3757 | IS66 family transposase IS682 | Transposase |
| QRM71_RS19250 (3938722) | 3938722..3939381 | + | 660 | Protein_3759 | immunoglobulin-binding protein | - |
| QRM71_RS19255 (3939574) | 3939574..3941115 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| QRM71_RS19260 (3941130) | 3941130..3941876 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| QRM71_RS19265 (3941964) | 3941964..3942569 | + | 606 | Protein_3762 | hypothetical protein | VF |
| QRM71_RS19270 (3942631) | 3942631..3943086 | + | 456 | WP_000884152.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| QRM71_RS19275 (3943471) | 3943471..3943809 | - | 339 | WP_000760916.1 | c-type lysozyme inhibitor | - |
| QRM71_RS19280 (3944314) | 3944314..3945003 | - | 690 | WP_073278785.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| QRM71_RS19285 (3945003) | 3945003..3946559 | - | 1557 | WP_000983423.1 | maltose/glucose-specific PTS transporter subunit IIC | - |
| QRM71_RS19290 (3946725) | 3946725..3947549 | + | 825 | WP_001293448.1 | MurR/RpiR family transcriptional regulator | - |
| QRM71_RS19295 (3947706) | 3947706..3949049 | - | 1344 | WP_029490356.1 | esterase-like activity of phytase family protein | - |
| QRM71_RS19300 (3949408) | 3949408..3950405 | - | 998 | Protein_3769 | IS110 family transposase | - |
| QRM71_RS19305 (3950544) | 3950544..3951860 | - | 1317 | WP_000803221.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| QRM71_RS19310 (3952061) | 3952061..3952216 | + | 156 | WP_232380132.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QRM71_RS19315 (3952325) | 3952325..3953538 | - | 1214 | Protein_3772 | IS3 family transposase | - |
| QRM71_RS19320 (3953590) | 3953590..3955038 | + | 1449 | Protein_3773 | sulfatase-like hydrolase/transferase | - |
| QRM71_RS19325 (3955500) | 3955500..3956792 | - | 1293 | WP_029490416.1 | MFS transporter | - |
| QRM71_RS19330 (3957307) | 3957307..3958499 | - | 1193 | Protein_3775 | IS3 family transposase IS2 | Transposase |
| QRM71_RS19335 (3958671) | 3958671..3958970 | + | 300 | Protein_3776 | YebF family protein | - |
| QRM71_RS19340 (3960021) | 3960021..3961580 | + | 1560 | WP_285978799.1 | AbgT family transporter | - |
| QRM71_RS19345 (3961892) | 3961892..3965716 | + | 3825 | WP_029400436.1 | S6 family peptidase | - |
| QRM71_RS19350 (3965834) | 3965834..3966090 | - | 257 | Protein_3779 | integrase core domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|