MGE detailed information
MGE type: Prophage MGE length: 52896 bp
Accession: NZ_CP127316 Location: 2660724..2713619 Organism: Escherichia coli strain Ch1 Replicon: chromosome
Accession: NZ_CP127316 Location: 2660724..2713619 Organism: Escherichia coli strain Ch1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRM71_RS13185 (2656318) | 2656318..2659158 | - | 2841 | WP_001551669.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| QRM71_RS13190 (2659181) | 2659181..2660482 | - | 1302 | WP_000046272.1 | inorganic triphosphatase | - |
| QRM71_RS13195 (2660724) | 2660724..2661344 | + | 621 | WP_001125331.1 | TIGR04211 family SH3 domain-containing protein | - |
| QRM71_RS13200 (2661408) | 2661408..2662646 | + | 1239 | WP_001551671.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| QRM71_RS13205 (2662727) | 2662727..2663548 | - | 822 | WP_001551672.1 | undecaprenyl-diphosphate phosphatase | - |
| QRM71_RS13210 (2663639) | 2663639..2664007 | - | 369 | WP_001295541.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| QRM71_RS13215 (2664112) | 2664112..2664729 | + | 618 | WP_001272796.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| QRM71_RS13220 (2664742) | 2664742..2665674 | - | 933 | WP_000935209.1 | DNA-binding transcriptional activator TtdR | - |
| QRM71_RS13225 (2665881) | 2665881..2666792 | + | 912 | WP_001551674.1 | L(+)-tartrate dehydratase subunit alpha | - |
| QRM71_RS13230 (2666789) | 2666789..2667394 | + | 606 | WP_000722957.1 | L(+)-tartrate dehydratase subunit beta | - |
| QRM71_RS13235 (2667443) | 2667443..2668906 | + | 1464 | WP_001521359.1 | L-tartrate/succinate antiporter | - |
| QRM71_RS13240 (2668949) | 2668949..2669962 | - | 1014 | WP_001264352.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| QRM71_RS13245 (2670200) | 2670200..2670415 | + | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| QRM71_RS13250 (2670526) | 2670526..2672271 | + | 1746 | WP_000918827.1 | DNA primase | - |
| QRM71_RS13255 (2672466) | 2672466..2674307 | + | 1842 | WP_000437371.1 | RNA polymerase sigma factor RpoD | - |
| QRM71_RS13260 (2674386) | 2674386..2674892 | - | 507 | WP_000228937.1 | G/U mismatch-specific DNA glycosylase | - |
| QRM71_RS13270 (2675883) | 2675883..2676163 | - | 281 | Protein_2604 | hypothetical protein | - |
| QRM71_RS13275 (2676433) | 2676433..2676534 | + | 102 | Protein_2605 | terminase small subunit | - |
| QRM71_RS13280 (2676747) | 2676747..2677160 | - | 414 | WP_214151002.1 | phage head-tail connector protein | - |
| QRM71_RS13285 (2677173) | 2677173..2677508 | - | 336 | WP_089623524.1 | head decoration protein | - |
| QRM71_RS13290 (2677520) | 2677520..2678575 | - | 1056 | WP_134262336.1 | major capsid protein | - |
| QRM71_RS13295 (2678575) | 2678575..2678781 | - | 207 | WP_029400540.1 | hypothetical protein | - |
| QRM71_RS13300 (2679022) | 2679022..2679294 | - | 273 | WP_160377778.1 | PerC family transcriptional regulator | - |
| QRM71_RS13305 (2679305) | 2679305..2679715 | - | 411 | WP_160377779.1 | single-stranded DNA-binding protein | - |
| QRM71_RS13310 (2679712) | 2679712..2679969 | - | 258 | WP_160377780.1 | hypothetical protein | - |
| QRM71_RS13315 (2680256) | 2680256..2682004 | - | 1749 | WP_260759305.1 | phage/plasmid primase, P4 family | - |
| QRM71_RS13320 (2682001) | 2682001..2682300 | - | 300 | WP_044706745.1 | DUF4222 domain-containing protein | - |
| QRM71_RS13325 (2682307) | 2682307..2682627 | - | 321 | WP_042966298.1 | hypothetical protein | - |
| QRM71_RS13330 (2682620) | 2682620..2683084 | - | 465 | WP_240089059.1 | host cell division inhibitor Icd-like protein | - |
| QRM71_RS13335 (2683077) | 2683077..2683280 | - | 204 | WP_252404304.1 | host cell division inhibitor Icd-like protein | - |
| QRM71_RS13340 (2683344) | 2683344..2683607 | - | 264 | Protein_2618 | hypothetical protein | - |
| QRM71_RS13345 (2683753) | 2683753..2683962 | - | 210 | WP_001049623.1 | helix-turn-helix domain-containing protein | - |
| QRM71_RS13350 (2684105) | 2684105..2684821 | - | 717 | WP_240089060.1 | hypothetical protein | - |
| QRM71_RS13355 (2684814) | 2684814..2686235 | - | 1422 | WP_160377695.1 | hypothetical protein ; Integrase | Integrase |
| QRM71_RS13360 (2686561) | 2686561..2687406 | - | 846 | WP_021539310.1 | DUF4942 domain-containing protein | - |
| QRM71_RS13365 (2687503) | 2687503..2687700 | - | 198 | WP_000772035.1 | DUF957 domain-containing protein | - |
| QRM71_RS13370 (2687712) | 2687712..2688203 | - | 492 | WP_000976868.1 | DUF5983 family protein | - |
| QRM71_RS13375 (2688200) | 2688200..2688574 | - | 375 | WP_001094452.1 | TA system toxin CbtA family protein | Toxin Detail |
| QRM71_RS13380 (2688664) | 2688664..2689032 | - | 369 | WP_001285579.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QRM71_RS13385 (2689112) | 2689112..2689333 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| QRM71_RS13390 (2689396) | 2689396..2689872 | - | 477 | WP_001186706.1 | RadC family protein | - |
| QRM71_RS13395 (2689888) | 2689888..2690373 | - | 486 | WP_285978918.1 | antirestriction protein | - |
| QRM71_RS13400 (2690465) | 2690465..2691283 | - | 819 | WP_001564116.1 | DUF932 domain-containing protein | - |
| QRM71_RS13405 (2691611) | 2691611..2694460 | - | 2850 | WP_021539311.1 | calcium-binding autotransporter Cah | - |
| QRM71_RS13410 (2694832) | 2694832..2695704 | - | 873 | WP_001069706.1 | GTPase family protein | - |
| QRM71_RS13415 (2696035) | 2696035..2696217 | + | 183 | WP_000283011.1 | hypothetical protein | - |
| QRM71_RS13420 (2696410) | 2696410..2697617 | + | 1208 | WP_085947924.1 | IS3 family transposase ISEc48 | Transposase |
| QRM71_RS13425 (2698683) | 2698683..2701655 | + | 2973 | WP_000108146.1 | type I restriction endonuclease subunit R | - |
| QRM71_RS13430 (2701837) | 2701837..2703108 | + | 1272 | WP_001564125.1 | restriction endonuclease subunit S | - |
| QRM71_RS13435 (2703105) | 2703105..2704265 | + | 1161 | WP_000836927.1 | AAA family ATPase | - |
| QRM71_RS13440 (2704262) | 2704262..2705869 | + | 1608 | WP_000134227.1 | type I restriction-modification system subunit M | - |
| QRM71_RS13445 (2706024) | 2706024..2706203 | + | 180 | Protein_2639 | transposase domain-containing protein | - |
| QRM71_RS13450 (2706525) | 2706525..2707301 | - | 777 | WP_001564126.1 | hypothetical protein | - |
| QRM71_RS13455 (2707721) | 2707721..2708236 | + | 516 | WP_001313190.1 | HNH endonuclease signature motif containing protein | - |
| QRM71_RS13460 (2708256) | 2708256..2708597 | - | 342 | Protein_2642 | IS66 family transposase ISEc43 | Transposase |
| QRM71_RS13465 (2708757) | 2708757..2708951 | - | 195 | Protein_2643 | IS66 family transposase ISKpn24 | Transposase |
| QRM71_RS13470 (2709039) | 2709039..2709233 | + | 195 | Protein_2644 | IS66 family transposase ISEc23 | Transposase |
| QRM71_RS13475 (2709283) | 2709283..2709771 | - | 489 | Protein_2645 | IS3 family transposase ISLad1 | Transposase |
| QRM71_RS13480 (2709852) | 2709852..2711360 | - | 1509 | WP_285978920.1 | group II intron reverse transcriptase/maturase | - |
| QRM71_RS13485 (2712033) | 2712033..2712772 | - | 740 | Protein_2647 | IS3 family transposase IS629 | Transposase |
| QRM71_RS13490 (2712828) | 2712828..2713619 | + | 792 | Protein_2648 | IS256 family transposase IS1414 | Transposase |
| QRM71_RS13495 (2713856) | 2713856..2715352 | - | 1497 | WP_001564131.1 | carbohydrate porin | - |
| QRM71_RS13500 (2715452) | 2715452..2716378 | - | 927 | WP_000108760.1 | aminoimidazole riboside kinase | - |
| QRM71_RS13505 (2716408) | 2716408..2716719 | - | 312 | WP_001313183.1 | DUF2913 family protein | - |
| QRM71_RS13510 (2716781) | 2716781..2716984 | - | 204 | WP_001313182.1 | DUF2913 family protein | - |
| QRM71_RS13515 (2716990) | 2716990..2717505 | - | 516 | WP_000523728.1 | PTS glucose transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|