MGE detailed information
MGE type: Prophage MGE length: 45086 bp
Accession: NZ_CP127303 Location: 1644875..1689960 Organism: Escherichia coli strain APEC37 Replicon: chromosome
Accession: NZ_CP127303 Location: 1644875..1689960 Organism: Escherichia coli strain APEC37 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRM68_RS09375 (1640266) | 1640266..1640763 | + | 498 | WP_001308201.1 | chorismate lyase | - |
| QRM68_RS09380 (1640776) | 1640776..1641648 | + | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| QRM68_RS09385 (1641803) | 1641803..1644226 | - | 2424 | WP_021557423.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| QRM68_RS09390 (1644397) | 1644397..1644765 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| QRM68_RS09395 (1644875) | 1644875..1645483 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| QRM68_RS09400 (1645556) | 1645556..1646881 | + | 1326 | WP_001351388.1 | MATE family efflux transporter DinF | - |
| QRM68_RS09405 (1646997) | 1646997..1647206 | + | 210 | WP_001030593.1 | CsbD family protein | - |
| QRM68_RS09410 (1647248) | 1647248..1647763 | - | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| QRM68_RS09415 (1648082) | 1648082..1648363 | + | 282 | Protein_1545 | DUF2713 domain-containing protein | - |
| QRM68_RS09420 (1648358) | 1648358..1649103 | + | 746 | Protein_1546 | DUF2713 family protein | - |
| QRM68_RS09425 (1649466) | 1649466..1649570 | + | 105 | Protein_1547 | tRNA-dihydrouridine synthase | - |
| QRM68_RS09430 (1649887) | 1649887..1650396 | + | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| QRM68_RS09435 (1650426) | 1650426..1650812 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| QRM68_RS09440 (1650852) | 1650852..1651025 | + | 174 | WP_000390072.1 | hypothetical protein | - |
| QRM68_RS09445 (1651073) | 1651073..1651354 | - | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| QRM68_RS09450 (1651391) | 1651391..1652173 | - | 783 | WP_047654657.1 | hypothetical protein | - |
| QRM68_RS09455 (1652362) | 1652362..1653186 | - | 825 | WP_000081311.1 | DUF2303 family protein | - |
| QRM68_RS09460 (1653252) | 1653252..1653614 | - | 363 | WP_097472974.1 | protein YfdP | - |
| QRM68_RS09465 (1653629) | 1653629..1653939 | - | 311 | Protein_1555 | hypothetical protein | - |
| QRM68_RS09470 (1654215) | 1654215..1654490 | - | 276 | WP_001514782.1 | hypothetical protein | - |
| QRM68_RS09475 (1654953) | 1654953..1655627 | - | 675 | WP_000859461.1 | LexA family transcriptional regulator | - |
| QRM68_RS09480 (1655718) | 1655718..1655918 | + | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| QRM68_RS09485 (1655962) | 1655962..1656513 | + | 552 | WP_000515860.1 | protein YmfL | - |
| QRM68_RS09490 (1656659) | 1656659..1656838 | + | 180 | WP_001341559.1 | DUF4222 domain-containing protein | - |
| QRM68_RS09495 (1656768) | 1656768..1657346 | + | 579 | WP_241219487.1 | ash family protein | - |
| QRM68_RS09500 (1657339) | 1657339..1657575 | + | 237 | WP_000933941.1 | hypothetical protein | - |
| QRM68_RS09505 (1657572) | 1657572..1658390 | + | 819 | WP_001677149.1 | helix-turn-helix domain-containing protein | - |
| QRM68_RS09510 (1658387) | 1658387..1658881 | + | 495 | WP_072129969.1 | PerC family transcriptional regulator | - |
| QRM68_RS09515 (1658881) | 1658881..1659534 | + | 654 | WP_001343335.1 | phage N-6-adenine-methyltransferase | - |
| QRM68_RS09520 (1659531) | 1659531..1659857 | + | 327 | WP_000210154.1 | LexA family transcriptional regulator | - |
| QRM68_RS09525 (1659854) | 1659854..1660243 | + | 390 | WP_285978745.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QRM68_RS09530 (1660263) | 1660263..1661072 | + | 810 | WP_023352899.1 | KilA-N domain-containing protein | - |
| QRM68_RS09535 (1661080) | 1661080..1662069 | + | 990 | WP_001439745.1 | DUF968 domain-containing protein | - |
| QRM68_RS09540 (1662083) | 1662083..1662835 | + | 753 | WP_130568279.1 | antitermination protein | - |
| QRM68_RS09545 (1662986) | 1662986..1663243 | + | 258 | WP_001569330.1 | hypothetical protein | - |
| QRM68_RS09550 (1663323) | 1663323..1663709 | + | 387 | WP_001283169.1 | phage holin family protein | - |
| QRM68_RS09555 (1663762) | 1663762..1663977 | + | 216 | WP_001471962.1 | phage holin family protein | - |
| QRM68_RS09560 (1663977) | 1663977..1664591 | + | 615 | WP_032235545.1 | glycoside hydrolase family 19 protein | - |
| QRM68_RS09565 (1664594) | 1664594..1665049 | + | 456 | WP_224476359.1 | lysis protein | - |
| QRM68_RS09570 (1665263) | 1665263..1665805 | + | 543 | WP_001565186.1 | Rha family transcriptional regulator | - |
| QRM68_RS09575 (1666092) | 1666092..1666442 | + | 351 | WP_001514791.1 | HNH endonuclease signature motif containing protein | - |
| QRM68_RS09580 (1666568) | 1666568..1667062 | + | 495 | WP_000929172.1 | phage terminase small subunit P27 family | - |
| QRM68_RS09585 (1667059) | 1667059..1668792 | + | 1734 | WP_000088150.1 | terminase large subunit | - |
| QRM68_RS09590 (1668804) | 1668804..1668986 | + | 183 | WP_000605614.1 | protein YmfR | - |
| QRM68_RS09595 (1668986) | 1668986..1670227 | + | 1242 | WP_000466255.1 | phage portal protein | - |
| QRM68_RS09600 (1670205) | 1670205..1670855 | + | 651 | WP_001193633.1 | HK97 family phage prohead protease | - |
| QRM68_RS09605 (1670870) | 1670870..1672075 | + | 1206 | WP_130568478.1 | phage major capsid protein | - |
| QRM68_RS09610 (1672125) | 1672125..1672325 | + | 201 | WP_130568479.1 | hypothetical protein | - |
| QRM68_RS09615 (1672328) | 1672328..1672651 | + | 324 | WP_130568480.1 | head-tail connector protein | - |
| QRM68_RS09620 (1672648) | 1672648..1673058 | + | 411 | WP_130568278.1 | phage head closure protein | - |
| QRM68_RS09625 (1673033) | 1673033..1673539 | + | 507 | WP_097363668.1 | hypothetical protein | - |
| QRM68_RS09630 (1673536) | 1673536..1674096 | + | 561 | WP_112911061.1 | hypothetical protein | - |
| QRM68_RS09635 (1674105) | 1674105..1674275 | + | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| QRM68_RS09640 (1674259) | 1674259..1675755 | + | 1497 | WP_096170768.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| QRM68_RS09645 (1675755) | 1675755..1676111 | + | 357 | WP_000090998.1 | phage tail tube protein | - |
| QRM68_RS09650 (1676108) | 1676108..1676431 | + | 324 | WP_000571713.1 | phage tail assembly protein | - |
| QRM68_RS09655 (1676516) | 1676516..1678417 | + | 1902 | WP_159197262.1 | phage tail tape measure protein | - |
| QRM68_RS09660 (1678482) | 1678482..1678970 | + | 489 | WP_000738065.1 | hypothetical protein | - |
| QRM68_RS09665 (1679027) | 1679027..1680400 | + | 1374 | WP_000347687.1 | DNA circularization N-terminal domain-containing protein | - |
| QRM68_RS09670 (1680397) | 1680397..1681476 | + | 1080 | WP_021567870.1 | phage tail protein | - |
| QRM68_RS09675 (1681476) | 1681476..1682024 | + | 549 | WP_001752126.1 | phage baseplate assembly protein V | - |
| QRM68_RS09680 (1682024) | 1682024..1682449 | + | 426 | WP_000424732.1 | phage GP46 family protein | - |
| QRM68_RS09685 (1682436) | 1682436..1683494 | + | 1059 | WP_001568408.1 | baseplate J/gp47 family protein | - |
| QRM68_RS09690 (1683485) | 1683485..1684069 | + | 585 | WP_000383572.1 | YmfQ family protein | - |
| QRM68_RS09695 (1684073) | 1684073..1684381 | + | 309 | Protein_1601 | protein StfP | - |
| QRM68_RS09700 (1684385) | 1684385..1684861 | + | 477 | WP_285978762.1 | phage tail protein | - |
| QRM68_RS09705 (1684861) | 1684861..1685463 | + | 603 | WP_285978746.1 | tail fiber assembly protein | - |
| QRM68_RS09710 (1685435) | 1685435..1685878 | - | 444 | WP_097489355.1 | tail fiber assembly protein | - |
| QRM68_RS09715 (1685899) | 1685899..1686345 | - | 447 | WP_285978747.1 | phage tail protein | - |
| QRM68_RS09720 (1686344) | 1686344..1686907 | + | 564 | WP_000639149.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QRM68_RS09725 (1686932) | 1686932..1687054 | + | 123 | WP_001437322.1 | hypothetical protein | - |
| QRM68_RS09730 (1687051) | 1687051..1687299 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| QRM68_RS09735 (1687361) | 1687361..1688458 | - | 1098 | WP_000332264.1 | hypothetical protein ; Integrase | Integrase |
| QRM68_RS09740 (1688547) | 1688547..1689584 | + | 1038 | WP_021557429.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| QRM68_RS09745 (1689718) | 1689718..1689960 | + | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| QRM68_RS09750 (1690126) | 1690126..1691109 | - | 984 | WP_021557430.1 | quinone oxidoreductase | - |
| QRM68_RS09755 (1691192) | 1691192..1692607 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| QRM68_RS09760 (1692660) | 1692660..1693739 | + | 1080 | WP_021557431.1 | alanine racemase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|