MGE detailed information
MGE type: Prophage MGE length: 51798 bp
Accession: NZ_CP127297 Location: 2748071..2799868 Organism: Escherichia coli strain APEC20/16 Replicon: chromosome
Accession: NZ_CP127297 Location: 2748071..2799868 Organism: Escherichia coli strain APEC20/16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRM67_RS13455 (2743452) | 2743452..2744162 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QRM67_RS13460 (2744165) | 2744165..2744726 | - | 562 | Protein_2614 | spermidine N1-acetyltransferase | - |
| QRM67_RS13465 (2744761) | 2744761..2745102 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| QRM67_RS13470 (2745237) | 2745237..2745562 | + | 326 | Protein_2616 | YnfA family protein | - |
| QRM67_RS13475 (2745768) | 2745768..2746982 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QRM67_RS13480 (2746994) | 2746994..2748013 | + | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| QRM67_RS13485 (2748201) | 2748201..2749481 | - | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QRM67_RS13490 (2749516) | 2749516..2749767 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QRM67_RS13495 (2749840) | 2749840..2752311 | - | 2472 | WP_016242145.1 | exonuclease | - |
| QRM67_RS13500 (2752404) | 2752404..2752595 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| QRM67_RS13505 (2752592) | 2752592..2752780 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QRM67_RS13510 (2753348) | 2753348..2753566 | - | 219 | WP_001171942.1 | protein YdfC | - |
| QRM67_RS13515 (2753596) | 2753596..2753724 | - | 129 | WP_000344930.1 | protein YdfB | - |
| QRM67_RS13520 (2753726) | 2753726..2753881 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QRM67_RS13525 (2754048) | 2754048..2754455 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| QRM67_RS13530 (2754539) | 2754539..2754769 | + | 231 | WP_000920569.1 | dicB transcriptional regulator DicC | - |
| QRM67_RS13535 (2754753) | 2754753..2755274 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| QRM67_RS13540 (2755255) | 2755255..2756220 | + | 966 | WP_000054514.1 | hypothetical protein | - |
| QRM67_RS13545 (2756261) | 2756261..2756683 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| QRM67_RS13550 (2756680) | 2756680..2757169 | + | 490 | Protein_2632 | class I SAM-dependent methyltransferase | - |
| QRM67_RS13555 (2757647) | 2757647..2758068 | + | 422 | Protein_2633 | hypothetical protein | - |
| QRM67_RS13560 (2758703) | 2758703..2759074 | + | 372 | WP_001406656.1 | ISNCY family transposase ISRel10 | Transposase |
| QRM67_RS13565 (2759112) | 2759112..2759774 | + | 663 | Protein_2635 | ISNCY family transposase ISCARN112 | Transposase |
| QRM67_RS13570 (2759895) | 2759895..2760044 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QRM67_RS13575 (2760481) | 2760481..2760813 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| QRM67_RS13580 (2761016) | 2761016..2761321 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QRM67_RS13585 (2761346) | 2761346..2761585 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QRM67_RS13590 (2761585) | 2761585..2761872 | + | 288 | WP_078205922.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QRM67_RS13595 (2761944) | 2761944..2762099 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QRM67_RS13600 (2762316) | 2762316..2762567 | + | 252 | WP_000980994.1 | protein Rem | - |
| QRM67_RS13605 (2762634) | 2762634..2762912 | + | 279 | WP_222699532.1 | hypothetical protein | - |
| QRM67_RS13610 (2762914) | 2762914..2763963 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| QRM67_RS13615 (2763977) | 2763977..2764729 | + | 753 | WP_286004827.1 | antitermination protein | - |
| QRM67_RS13620 (2765007) | 2765007..2765096 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QRM67_RS13625 (2765151) | 2765151..2765363 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QRM67_RS13630 (2765664) | 2765664..2765879 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QRM67_RS13635 (2766243) | 2766243..2766413 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QRM67_RS13640 (2766633) | 2766633..2766848 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QRM67_RS13645 (2766853) | 2766853..2767164 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| QRM67_RS13650 (2767161) | 2767161..2767694 | + | 534 | WP_001092971.1 | lysozyme | - |
| QRM67_RS13655 (2767691) | 2767691..2768188 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QRM67_RS13660 (2768552) | 2768552..2768764 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QRM67_RS13665 (2768775) | 2768775..2768963 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QRM67_RS13670 (2768966) | 2768966..2769031 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| QRM67_RS13675 (2769036) | 2769036..2769266 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QRM67_RS13680 (2769438) | 2769438..2769611 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QRM67_RS13685 (2769763) | 2769763..2770173 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QRM67_RS13690 (2770231) | 2770231..2770464 | - | 234 | WP_040079566.1 | YlcI/YnfO family protein | - |
| QRM67_RS13695 (2770853) | 2770853..2771398 | + | 546 | WP_000453580.1 | DNA-packaging protein | - |
| QRM67_RS13700 (2771373) | 2771373..2773298 | + | 1926 | WP_001027254.1 | phage terminase large subunit family protein | - |
| QRM67_RS13705 (2773295) | 2773295..2773501 | + | 207 | WP_000198149.1 | gpW family protein | - |
| QRM67_RS13710 (2773498) | 2773498..2775099 | + | 1602 | WP_078206208.1 | phage portal protein | - |
| QRM67_RS13715 (2775080) | 2775080..2776399 | + | 1320 | WP_000123271.1 | S49 family peptidase | - |
| QRM67_RS13720 (2776409) | 2776409..2776741 | + | 333 | WP_001299443.1 | head decoration protein | - |
| QRM67_RS13725 (2776797) | 2776797..2777822 | + | 1026 | WP_000063238.1 | major capsid protein | - |
| QRM67_RS13730 (2777864) | 2777864..2778259 | + | 396 | WP_000158875.1 | DNA-packaging protein FI | - |
| QRM67_RS13735 (2778271) | 2778271..2778624 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| QRM67_RS13740 (2778636) | 2778636..2779214 | + | 579 | WP_000975081.1 | phage tail protein | - |
| QRM67_RS13745 (2779211) | 2779211..2779606 | + | 396 | WP_000683129.1 | phage minor tail U family protein | - |
| QRM67_RS13750 (2779614) | 2779614..2780354 | + | 741 | WP_001361512.1 | phage tail protein | - |
| QRM67_RS13755 (2780370) | 2780370..2780792 | + | 423 | WP_078206240.1 | phage minor tail protein G | - |
| QRM67_RS13760 (2780774) | 2780774..2781208 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| QRM67_RS13765 (2781201) | 2781201..2783780 | + | 2580 | WP_213854583.1 | phage tail tape measure protein | - |
| QRM67_RS13770 (2783777) | 2783777..2784106 | + | 330 | WP_000847379.1 | phage tail protein | - |
| QRM67_RS13775 (2784106) | 2784106..2784804 | + | 699 | WP_112046107.1 | phage minor tail protein L | - |
| QRM67_RS13780 (2784810) | 2784810..2785552 | + | 743 | Protein_2678 | C40 family peptidase | - |
| QRM67_RS13785 (2785549) | 2785549..2786121 | + | 573 | WP_000847666.1 | tail assembly protein | - |
| QRM67_RS13790 (2786182) | 2786182..2789580 | + | 3399 | WP_286004828.1 | host specificity protein J | - |
| QRM67_RS13795 (2789647) | 2789647..2790246 | + | 600 | WP_078206209.1 | Outer membrane protein X | VF |
| QRM67_RS13800 (2790311) | 2790311..2793334 | + | 3024 | WP_112861159.1 | phage tail protein | - |
| QRM67_RS13805 (2793334) | 2793334..2793909 | + | 576 | WP_112861158.1 | tail fiber assembly protein | - |
| QRM67_RS13810 (2794007) | 2794007..2794597 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QRM67_RS13815 (2794914) | 2794914..2795147 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QRM67_RS13820 (2795216) | 2795216..2795329 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QRM67_RS13825 (2795934) | 2795934..2797217 | + | 1284 | Protein_2687 | MHS family MFS transporter YdfJ | - |
| QRM67_RS13830 (2797306) | 2797306..2798766 | + | 1461 | WP_000527753.1 | mannitol dehydrogenase family protein | - |
| QRM67_RS13835 (2798802) | 2798802..2799005 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QRM67_RS13840 (2799182) | 2799182..2799868 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QRM67_RS13845 (2799957) | 2799957..2800703 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| QRM67_RS13850 (2800840) | 2800840..2802885 | + | 2046 | WP_001299399.1 | peptidyl-dipeptidase Dcp | - |
| QRM67_RS13855 (2802930) | 2802930..2803448 | - | 519 | WP_001024561.1 | 2-oxo-tetronate isomerase | - |
| QRM67_RS13860 (2803724) | 2803724..2804116 | + | 393 | WP_047082146.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|