MGE detailed information
MGE type: IScluster/Tn MGE length: 40349 bp
Accession: NZ_CP127049 Location: 7350..47698 Organism: Pseudomonas amygdali pv. lachrymans strain YM7902 Replicon: plasmid pPlaYM7902D
Accession: NZ_CP127049 Location: 7350..47698 Organism: Pseudomonas amygdali pv. lachrymans strain YM7902 Replicon: plasmid pPlaYM7902D
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QO021_RS31340 (QO021_31335) | 2487..2903 | - | 417 | WP_005747127.1 | TrfB-related DNA-binding protein | - |
| QO021_RS31345 (QO021_31340) | 2965..3252 | - | 288 | WP_005622028.1 | XRE family transcriptional regulator | - |
| QO021_RS31350 (QO021_31345) | 3252..3590 | - | 339 | WP_005747126.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QO021_RS31355 (QO021_31350) | 3797..6628 | + | 2832 | WP_005747125.1 | AAA family ATPase | - |
| QO021_RS31360 (QO021_31355) | 6775..7293 | - | 519 | WP_005747123.1 | GNAT family N-acetyltransferase | - |
| QO021_RS31365 (QO021_31360) | 7350..8918 | - | 1569 | WP_046835393.1 | IS66 family transposase ISPpu19 | Transposase |
| QO021_RS31370 (QO021_31365) | 8980..9315 | - | 336 | WP_005747121.1 | IS66 family transposase ISPsy43 | Transposase |
| QO021_RS31375 (QO021_31370) | 9312..9680 | - | 369 | WP_230852682.1 | transposase | - |
| QO021_RS31380 (QO021_31375) | 10210..10830 | + | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QO021_RS31385 (QO021_31380) | 11156..11377 | - | 222 | WP_004666918.1 | hypothetical protein | - |
| QO021_RS31390 (QO021_31385) | 11415..11828 | - | 414 | WP_005747117.1 | TraR/DksA family transcriptional regulator | - |
| QO021_RS31395 (QO021_31390) | 11851..12081 | - | 231 | WP_004668066.1 | carbon storage regulator | - |
| QO021_RS31400 (QO021_31395) | 12214..12717 | + | 504 | WP_020339809.1 | hypothetical protein | - |
| QO021_RS31405 (QO021_31400) | 12783..13796 | + | 1014 | WP_005741118.1 | IS30 family transposase IS1394 | Transposase |
| QO021_RS31410 (QO021_31405) | 13826..14274 | + | 449 | Protein_17 | tyrosine-type recombinase/integrase | - |
| QO021_RS31415 (QO021_31410) | 14665..14922 | - | 258 | WP_046835278.1 | hypothetical protein | - |
| QO021_RS31420 (QO021_31415) | 15014..15226 | - | 213 | WP_005746110.1 | hypothetical protein | - |
| QO021_RS31425 (QO021_31420) | 15284..15544 | - | 261 | WP_005746111.1 | hypothetical protein | - |
| QO021_RS31430 (QO021_31425) | 15773..16750 | + | 978 | WP_007247761.1 | IS5 family transposase IS52 | Transposase |
| QO021_RS31435 (QO021_31430) | 16999..17214 | - | 216 | WP_005746113.1 | hypothetical protein | - |
| QO021_RS31440 (QO021_31435) | 17308..17640 | - | 333 | WP_005746114.1 | hypothetical protein | - |
| QO021_RS31445 (QO021_31440) | 17804..18781 | - | 978 | WP_007247761.1 | IS5 family transposase IS52 | Transposase |
| QO021_RS31450 (QO021_31445) | 18873..19106 | - | 234 | WP_005746115.1 | hypothetical protein | - |
| QO021_RS31455 (QO021_31450) | 19145..19570 | + | 426 | Protein_26 | IS5 family transposase ISPsy2 | Transposase |
| QO021_RS31460 (QO021_31455) | 19926..20546 | - | 621 | WP_004642393.1 | hypothetical protein | - |
| QO021_RS31465 (QO021_31460) | 20543..20809 | - | 267 | WP_004642394.1 | hypothetical protein | - |
| QO021_RS31470 (QO021_31465) | 21263..21529 | + | 267 | WP_227024934.1 | hypothetical protein | - |
| QO021_RS31475 (QO021_31470) | 21597..22574 | + | 978 | WP_007247761.1 | IS5 family transposase IS52 | Transposase |
| QO021_RS31480 (QO021_31475) | 22922..23170 | + | 249 | WP_005746122.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| QO021_RS31485 (QO021_31480) | 23183..23533 | + | 351 | WP_005746121.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QO021_RS31490 (QO021_31485) | 23702..24160 | - | 459 | WP_272939231.1 | type III effector | - |
| QO021_RS31495 (QO021_31490) | 24396..25373 | + | 978 | WP_007247761.1 | IS5 family transposase IS52 | Transposase |
| QO021_RS31500 (QO021_31495) | 25987..26964 | + | 978 | WP_285230714.1 | IS5 family transposase IS52 | Transposase |
| QO021_RS31505 (QO021_31500) | 27327..28727 | + | 1401 | WP_052508578.1 | TrbI/VirB10 family protein | - |
| QO021_RS31510 (QO021_31505) | 29071..30048 | - | 978 | WP_007247761.1 | IS5 family transposase IS52 | Transposase |
| QO021_RS31515 (QO021_31510) | 30174..31145 | - | 972 | WP_080956124.1 | XopAH/AvrB family type III secretion system effector | - |
| QO021_RS31520 (QO021_31515) | 31353..31481 | + | 129 | Protein_39 | transposase | - |
| QO021_RS31525 (QO021_31520) | 31887..32729 | + | 843 | WP_080437679.1 | XopAF/AvrXv3 family type III secretion system effector | - |
| QO021_RS31530 (QO021_31525) | 33046..33642 | + | 597 | WP_003381935.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| QO021_RS31535 (QO021_31530) | 33632..36658 | + | 3027 | WP_005746130.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| QO021_RS31540 (QO021_31535) | 36720..36989 | + | 270 | WP_054068815.1 | hypothetical protein | - |
| QO021_RS31545 (QO021_31540) | 37171..37620 | + | 450 | WP_044344625.1 | hypothetical protein | - |
| QO021_RS31550 (QO021_31545) | 37607..37828 | + | 222 | WP_019740981.1 | hypothetical protein | - |
| QO021_RS31555 (QO021_31550) | 38189..38443 | + | 255 | WP_005746128.1 | hypothetical protein | - |
| QO021_RS31560 (QO021_31555) | 39027..40463 | + | 1437 | WP_005746124.1 | replication initiation protein | - |
| QO021_RS31565 (QO021_31560) | 40789..41058 | + | 270 | WP_200900929.1 | hypothetical protein | - |
| QO021_RS31570 (QO021_31565) | 41246..44272 | - | 3027 | WP_005746130.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| QO021_RS31575 (QO021_31570) | 44262..44858 | - | 597 | WP_003381935.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| QO021_RS31580 (QO021_31575) | 45175..46017 | - | 843 | WP_080437679.1 | XopAF/AvrXv3 family type III secretion system effector | - |
| QO021_RS31585 (QO021_31580) | 46423..47118 | - | 696 | Protein_52 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| QO021_RS31590 (QO021_31585) | 47123..47698 | - | 576 | WP_031599078.1 | Tn3 family transposase ISPsy39 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|