MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_CP126955 Location: 3971128..3982802 Organism: Escherichia coli O78:H4 strain APEC E123 Replicon: chromosome
Accession: NZ_CP126955 Location: 3971128..3982802 Organism: Escherichia coli O78:H4 strain APEC E123 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA21_RS19525 (3967453) | 3967453..3968661 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| QQA21_RS19530 (3968687) | 3968687..3970018 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| QQA21_RS19535 (3970040) | 3970040..3971029 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| QQA21_RS19540 (3971128) | 3971128..3972066 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| QQA21_RS19545 (3972381) | 3972381..3972599 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| QQA21_RS19550 (3972855) | 3972855..3973394 | + | 540 | WP_000675746.1 | protein YhaB | - |
| QQA21_RS19555 (3973416) | 3973416..3974603 | + | 1188 | WP_000484577.1 | YhaC family protein | - |
| QQA21_RS19565 (3975626) | 3975626..3976771 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| QQA21_RS19570 (3976868) | 3976868..3977758 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| QQA21_RS19575 (3977788) | 3977788..3978558 | - | 771 | WP_001058214.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| QQA21_RS19580 (3978574) | 3978574..3979908 | - | 1335 | WP_000599652.1 | galactarate/glucarate/glycerate transporter GarP | - |
| QQA21_RS19585 (3980283) | 3980283..3981854 | + | 1572 | WP_001273761.1 | galactarate dehydratase | - |
| QQA21_RS19590 (3982003) | 3982003..3982338 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| QQA21_RS19595 (3982338) | 3982338..3982802 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| QQA21_RS19600 (3982856) | 3982856..3983665 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| QQA21_RS19605 (3983914) | 3983914..3985194 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| QQA21_RS19610 (3985217) | 3985217..3985690 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| QQA21_RS19615 (3985701) | 3985701..3986480 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| QQA21_RS19620 (3986470) | 3986470..3987348 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| QQA21_RS19625 (3987366) | 3987366..3987800 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|