MGE detailed information
MGE type: Genomic_island MGE length: 26720 bp
Accession: NZ_CP126952 Location: 4442141..4468860 Organism: Escherichia coli O78:H4 strain APEC E12049 Replicon: chromosome
Accession: NZ_CP126952 Location: 4442141..4468860 Organism: Escherichia coli O78:H4 strain APEC E12049 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA22_RS21700 (4437620) | 4437620..4438123 | - | 504 | Protein_4246 | type 1 fimbria minor subunit FimG | - |
| QQA22_RS21705 (4438136) | 4438136..4438666 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| QQA22_RS21710 (4438676) | 4438676..4441312 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| QQA22_RS21715 (4441379) | 4441379..4442104 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| QQA22_RS21720 (4442141) | 4442141..4442680 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| QQA22_RS21725 (4442745) | 4442745..4443293 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| QQA22_RS21730 (4443776) | 4443776..4444372 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| QQA22_RS21735 (4444850) | 4444850..4445452 | - | 603 | WP_097496513.1 | ISKra4 family transposase ISCep1 | VF |
| QQA22_RS21740 (4446908) | 4446908..4447624 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QQA22_RS21745 (4447644) | 4447644..4448750 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| QQA22_RS21750 (4448815) | 4448815..4449795 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| QQA22_RS21755 (4449905) | 4449905..4450110 | + | 206 | Protein_4257 | HNH endonuclease | - |
| QQA22_RS21760 (4450378) | 4450378..4451618 | - | 1241 | Protein_4258 | helicase YjhR | - |
| QQA22_RS21765 (4451734) | 4451734..4451865 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| QQA22_RS21770 (4452356) | 4452356..4452613 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| QQA22_RS21775 (4452625) | 4452625..4453170 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| QQA22_RS21780 (4453226) | 4453226..4453972 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| QQA22_RS21785 (4454141) | 4454141..4454359 | + | 219 | Protein_4263 | hypothetical protein | - |
| QQA22_RS21790 (4454397) | 4454397..4454513 | + | 117 | Protein_4264 | VOC family protein | - |
| QQA22_RS21795 (4454758) | 4454758..4455879 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| QQA22_RS21800 (4455876) | 4455876..4456154 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| QQA22_RS21805 (4456166) | 4456166..4457479 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| QQA22_RS21810 (4457492) | 4457492..4458298 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| QQA22_RS21815 (4458429) | 4458429..4458860 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| QQA22_RS21820 (4458872) | 4458872..4459504 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| QQA22_RS21825 (4459521) | 4459521..4460303 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| QQA22_RS21830 (4460606) | 4460606..4461394 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| QQA22_RS21835 (4461399) | 4461399..4462304 | + | 906 | WP_001335841.1 | dihydrodipicolinate synthase family protein | - |
| QQA22_RS21840 (4462315) | 4462315..4464282 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| QQA22_RS21845 (4464389) | 4464389..4465738 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| QQA22_RS21850 (4466085) | 4466085..4467071 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| QQA22_RS21855 (4467112) | 4467112..4467957 | - | 846 | WP_016247886.1 | GRP family sugar transporter | - |
| QQA22_RS21860 (4468219) | 4468219..4468860 | - | 642 | WP_000439687.1 | L-fuculose-phosphate aldolase | - |
| QQA22_RS21865 (4468891) | 4468891..4470006 | - | 1116 | WP_001022014.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| QQA22_RS21870 (4470016) | 4470016..4471275 | - | 1260 | WP_000132327.1 | S-methyl-5-thioribose kinase | - |
| QQA22_RS21875 (4472042) | 4472042..4473583 | + | 1542 | WP_001298859.1 | IS21-like element ISEc12 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|