MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 124136 bp
Accession: NZ_CP126946 Location: 3779176..3903311 Organism: Escherichia coli O78:H51 strain APEC E18005 Replicon: chromosome
Accession: NZ_CP126946 Location: 3779176..3903311 Organism: Escherichia coli O78:H51 strain APEC E18005 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA24_RS18335 (3774361) | 3774361..3775068 | + | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| QQA24_RS18345 (3775447) | 3775447..3776709 | + | 1263 | WP_001558410.1 | integrase arm-type DNA-binding domain-containing protein | - |
| QQA24_RS18350 (3776806) | 3776806..3778479 | - | 1674 | WP_001389181.1 | sulfatase-like hydrolase/transferase | - |
| QQA24_RS18355 (3778532) | 3778532..3778729 | - | 198 | WP_001238009.1 | hypothetical protein | - |
| QQA24_RS18360 (3779132) | 3779132..3780703 | - | 1572 | WP_001100175.1 | ATP--cob(I)alamin adenosyltransferase | - |
| QQA24_RS18365 (3780750) | 3780750..3781829 | - | 1080 | WP_001207400.1 | hypothetical protein | - |
| QQA24_RS18370 (3781878) | 3781878..3782774 | - | 897 | WP_000785681.1 | WYL domain-containing protein | - |
| QQA24_RS18375 (3783194) | 3783194..3783931 | - | 738 | WP_001389182.1 | OmpW family outer membrane protein | - |
| QQA24_RS18380 (3784250) | 3784250..3784723 | + | 474 | WP_000335225.1 | H-NS family nucleoid-associated regulatory protein | - |
| QQA24_RS18385 (3785275) | 3785275..3786282 | - | 1008 | WP_001232703.1 | LacI family DNA-binding transcriptional regulator | - |
| QQA24_RS18390 (3786308) | 3786308..3787717 | - | 1410 | WP_023181052.1 | sucrose-6-phosphate hydrolase | - |
| QQA24_RS18395 (3787717) | 3787717..3789087 | - | 1371 | WP_000344909.1 | sucrose-specific PTS transporter subunit IIBC | - |
| QQA24_RS18400 (3789148) | 3789148..3790665 | - | 1518 | WP_000277208.1 | carbohydrate porin | - |
| QQA24_RS18405 (3790833) | 3790833..3791753 | - | 921 | WP_000107666.1 | aminoimidazole riboside kinase | - |
| QQA24_RS18410 (3791978) | 3791978..3792109 | + | 132 | WP_000572531.1 | hypothetical protein | - |
| QQA24_RS18415 (3792422) | 3792422..3792568 | + | 147 | WP_001324285.1 | hypothetical protein | - |
| QQA24_RS18420 (3792686) | 3792686..3793348 | - | 663 | WP_000836532.1 | PAS domain-containing protein | - |
| QQA24_RS18425 (3793534) | 3793534..3794493 | + | 960 | WP_000765976.1 | sugar phosphate isomerase/epimerase family protein | - |
| QQA24_RS18430 (3794515) | 3794515..3794892 | + | 378 | WP_001389183.1 | RidA family protein | - |
| QQA24_RS18435 (3794907) | 3794907..3796139 | + | 1233 | WP_001389184.1 | MFS transporter | - |
| QQA24_RS18440 (3796404) | 3796404..3797129 | - | 726 | Protein_3607 | IS66 family transposase ISEc23 | Transposase |
| QQA24_RS18445 (3797160) | 3797160..3797510 | - | 351 | WP_000624710.1 | IS66 family transposase ISEc47 | Transposase |
| QQA24_RS18450 (3797507) | 3797507..3797926 | - | 420 | WP_000422706.1 | IS66 family transposase ISEc23 | Transposase |
| QQA24_RS18460 (3799501) | 3799501..3800216 | + | 716 | Protein_3611 | IS21 family transposase | - |
| QQA24_RS18465 (3800708) | 3800708..3800923 | + | 216 | WP_000021000.1 | PapB/FocB family fimbrial expression transcriptional regulator | - |
| QQA24_RS18470 (3800968) | 3800968..3801474 | + | 507 | WP_000920486.1 | Pap fimbrial major pilin protein | VF |
| QQA24_RS18475 (3801560) | 3801560..3802147 | + | 588 | WP_000946201.1 | PAP fimbrial minor pilin protein | VF |
| QQA24_RS18480 (3802268) | 3802268..3804778 | + | 2511 | WP_000739801.1 | Outer membrane usher protein PapC | VF |
| QQA24_RS18485 (3804847) | 3804847..3805578 | + | 732 | WP_001171049.1 | Chaperone protein PapD | VF |
| QQA24_RS18490 (3805615) | 3805615..3806178 | + | 564 | WP_001077947.1 | pilus-assembly fibrillin subunit | - |
| QQA24_RS18495 (3806262) | 3806262..3806780 | + | 519 | WP_001223371.1 | Fimbrial adapter PapF | VF |
| QQA24_RS18500 (3806803) | 3806803..3807792 | + | 990 | WP_165473670.1 | nuclease PIN | - |
| QQA24_RS18505 (3807845) | 3807845..3808627 | + | 783 | WP_000481332.1 | EAL domain-containing protein | - |
| QQA24_RS18510 (3808897) | 3808897..3809091 | - | 195 | Protein_3621 | transposase | - |
| QQA24_RS18515 (3809419) | 3809419..3809661 | - | 243 | Protein_3622 | IS110 family transposase | - |
| QQA24_RS18520 (3810243) | 3810243..3810419 | - | 177 | Protein_3623 | integrase | - |
| QQA24_RS18525 (3810508) | 3810508..3810882 | + | 375 | Protein_3624 | integrase core domain-containing protein | - |
| QQA24_RS18530 (3811029) | 3811029..3812219 | - | 1191 | Protein_3625 | IS3 family transposase | - |
| QQA24_RS18535 (3812434) | 3812434..3813981 | - | 1548 | WP_001294844.1 | hypothetical protein | - |
| QQA24_RS18540 (3813981) | 3813981..3818939 | - | 4959 | WP_000877066.1 | AAA domain-containing protein | - |
| QQA24_RS18545 (3819147) | 3819147..3819302 | + | 156 | Protein_3628 | integrase | - |
| QQA24_RS18550 (3819339) | 3819339..3819953 | - | 615 | Protein_3629 | IS3 family transposase ISEc48 | Transposase |
| QQA24_RS18555 (3820141) | 3820141..3820470 | + | 330 | WP_000042910.1 | IS66 family transposase ISEc49 | Transposase |
| QQA24_RS18560 (3820457) | 3820457..3820849 | + | 393 | WP_000950652.1 | IS66 family transposase ISEc49 | Transposase |
| QQA24_RS18565 (3820856) | 3820856..3821730 | + | 875 | Protein_3632 | IS66 family transposase ISEc49 | Transposase |
| QQA24_RS18570 (3821726) | 3821726..3822535 | - | 810 | Protein_3633 | hypothetical protein | VF |
| QQA24_RS18575 (3822499) | 3822499..3824178 | - | 1680 | Protein_3634 | hypothetical protein | VF |
| QQA24_RS18580 (3824171) | 3824171..3824341 | - | 171 | Protein_3635 | hypothetical protein | - |
| QQA24_RS18585 (3824430) | 3824430..3824930 | - | 501 | WP_001167446.1 | hypothetical protein | - |
| QQA24_RS18590 (3824930) | 3824930..3825169 | - | 240 | WP_000335228.1 | hypothetical protein | - |
| QQA24_RS18595 (3825198) | 3825198..3825428 | - | 231 | WP_001389194.1 | AlpA family transcriptional regulator | - |
| QQA24_RS18600 (3825497) | 3825497..3826057 | - | 561 | WP_000991581.1 | hypothetical protein | - |
| QQA24_RS18605 (3826315) | 3826315..3826881 | - | 567 | WP_001126801.1 | inovirus-type Gp2 protein | - |
| QQA24_RS18610 (3828459) | 3828459..3829163 | + | 705 | WP_001389195.1 | toll/interleukin-1 receptor domain-containing protein | - |
| QQA24_RS18615 (3829587) | 3829587..3830318 | - | 732 | WP_001075483.1 | inovirus Gp2 family protein | - |
| QQA24_RS18620 (3832010) | 3832010..3832801 | + | 792 | WP_000175256.1 | hypothetical protein | - |
| QQA24_RS18625 (3832798) | 3832798..3833784 | - | 987 | WP_029396404.1 | hypothetical protein | - |
| QQA24_RS18630 (3833891) | 3833891..3834775 | + | 885 | WP_000010399.1 | 50S ribosome-binding GTPase | - |
| QQA24_RS18635 (3834894) | 3834894..3835571 | + | 678 | WP_001097362.1 | hypothetical protein | - |
| QQA24_RS18640 (3835577) | 3835577..3835810 | + | 234 | WP_001278288.1 | DUF905 family protein | - |
| QQA24_RS18645 (3835900) | 3835900..3836718 | + | 819 | WP_165473672.1 | DUF932 domain-containing protein | - |
| QQA24_RS18650 (3836810) | 3836810..3837295 | + | 486 | WP_032216512.1 | antirestriction protein | - |
| QQA24_RS18655 (3837311) | 3837311..3837787 | + | 477 | WP_001186724.1 | RadC family protein | - |
| QQA24_RS18660 (3837856) | 3837856..3838077 | + | 222 | WP_001601167.1 | DUF987 domain-containing protein | - |
| QQA24_RS18665 (3838096) | 3838096..3838740 | + | 645 | Protein_3652 | antitoxin of toxin-antitoxin stability system | - |
| QQA24_RS18670 (3838759) | 3838759..3839127 | + | 369 | WP_032216526.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QQA24_RS18675 (3839217) | 3839217..3839594 | + | 378 | WP_000854821.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| QQA24_RS18680 (3839591) | 3839591..3839740 | + | 150 | Protein_3655 | DUF5983 family protein | - |
| QQA24_RS18685 (3839816) | 3839816..3840013 | + | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| QQA24_RS18690 (3840098) | 3840098..3840940 | + | 843 | WP_001280501.1 | DUF4942 domain-containing protein | - |
| QQA24_RS18695 (3841221) | 3841221..3841757 | - | 537 | WP_000942795.1 | Type II secretion system protein M | VF |
| QQA24_RS18700 (3841759) | 3841759..3842937 | - | 1179 | WP_000094989.1 | hypothetical protein | VF |
| QQA24_RS18705 (3842934) | 3842934..3843911 | - | 978 | WP_000633239.1 | Putative type II secretion system protein K | VF |
| QQA24_RS18710 (3843908) | 3843908..3844513 | - | 606 | WP_001255030.1 | Type II secretion system protein J | VF |
| QQA24_RS18715 (3844510) | 3844510..3844881 | - | 372 | WP_000820125.1 | hypothetical protein | VF |
| QQA24_RS18720 (3844878) | 3844878..3845441 | - | 564 | WP_001115139.1 | Type II secretion system protein H | VF |
| QQA24_RS18725 (3845445) | 3845445..3845900 | - | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| QQA24_RS18730 (3845917) | 3845917..3846444 | - | 528 | Protein_3665 | Type II secretion system protein F | VF |
| QQA24_RS18735 (3846508) | 3846508..3847716 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| QQA24_RS18740 (3847729) | 3847729..3848478 | - | 750 | Protein_3667 | Type II secretion system protein F | VF |
| QQA24_RS18745 (3848478) | 3848478..3849971 | - | 1494 | WP_000249368.1 | Type II secretion system protein E | VF |
| QQA24_RS18750 (3849971) | 3849971..3852031 | - | 2061 | WP_000498824.1 | Secretin GspD 2 | VF |
| QQA24_RS18755 (3852061) | 3852061..3853020 | - | 960 | WP_001317325.1 | Type II secretion system protein C 2 | VF |
| QQA24_RS18760 (3853038) | 3853038..3853448 | - | 411 | WP_001349452.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| QQA24_RS18765 (3853514) | 3853514..3854323 | - | 810 | WP_001317326.1 | Prepilin peptidase PppA | VF |
| QQA24_RS18770 (3854463) | 3854463..3859031 | - | 4569 | WP_001034504.1 | hypothetical protein | VF |
| QQA24_RS18775 (3859516) | 3859516..3861198 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| QQA24_RS18780 (3861554) | 3861554..3863725 | - | 2172 | WP_000084053.1 | malate synthase G | - |
| QQA24_RS18785 (3863747) | 3863747..3864151 | - | 405 | WP_000853256.1 | GlcG family protein | - |
| QQA24_RS18790 (3864156) | 3864156..3865379 | - | 1224 | WP_001194682.1 | glycolate oxidase subunit GlcF | - |
| QQA24_RS18795 (3865390) | 3865390..3866442 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| QQA24_RS18800 (3866442) | 3866442..3867941 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| QQA24_RS18805 (3868192) | 3868192..3868956 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| QQA24_RS18810 (3868963) | 3868963..3870105 | - | 1143 | WP_000388786.1 | protein YghO | - |
| QQA24_RS18815 (3870476) | 3870476..3872197 | + | 1722 | WP_001390306.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| QQA24_RS18820 (3872194) | 3872194..3873108 | + | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| QQA24_RS18825 (3873140) | 3873140..3873388 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| QQA24_RS18830 (3873388) | 3873388..3874560 | + | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| QQA24_RS18835 (3874595) | 3874595..3875674 | - | 1080 | WP_001298753.1 | LPS export ABC transporter permease LptG | - |
| QQA24_RS18840 (3875671) | 3875671..3876741 | - | 1071 | WP_000779644.1 | LPS export ABC transporter permease LptF | - |
| QQA24_RS18845 (3876772) | 3876772..3877332 | - | 561 | WP_001315848.1 | YtfJ family protein | - |
| QQA24_RS18850 (3877344) | 3877344..3878168 | - | 825 | WP_000984977.1 | hypothetical protein | - |
| QQA24_RS18855 (3878168) | 3878168..3879517 | - | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| QQA24_RS18860 (3879563) | 3879563..3880321 | - | 759 | WP_000339532.1 | hypothetical protein | - |
| QQA24_RS18865 (3880353) | 3880353..3881066 | - | 714 | WP_001076237.1 | dTMP kinase | - |
| QQA24_RS18870 (3881240) | 3881240..3881932 | + | 693 | WP_001190773.1 | dTMP kinase | - |
| QQA24_RS18875 (3881981) | 3881981..3883480 | - | 1500 | WP_000933279.1 | inorganic phosphate transporter PitB | - |
| QQA24_RS18880 (3883772) | 3883772..3885631 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| QQA24_RS18885 (3885836) | 3885836..3886702 | + | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| QQA24_RS18890 (3887002) | 3887002..3887982 | + | 981 | WP_000399659.1 | IS110 family transposase IS621 | Transposase |
| QQA24_RS18895 (3888104) | 3888104..3888352 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| QQA24_RS18900 (3888365) | 3888365..3888706 | - | 342 | WP_000544952.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| QQA24_RS18905 (3888699) | 3888699..3889187 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| QQA24_RS18910 (3889180) | 3889180..3889674 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| QQA24_RS18915 (3889674) | 3889674..3891377 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| QQA24_RS18920 (3891374) | 3891374..3892552 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| QQA24_RS18925 (3892542) | 3892542..3893528 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| QQA24_RS18930 (3893531) | 3893531..3894649 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| QQA24_RS18935 (3894838) | 3894838..3895125 | - | 288 | WP_001059136.1 | DUF2623 family protein YghW | - |
| QQA24_RS18940 (3895244) | 3895244..3896131 | - | 888 | WP_001297303.1 | YghX family hydrolase | - |
| QQA24_RS18945 (3896288) | 3896288..3897328 | + | 1041 | WP_000262156.1 | L-glyceraldehyde 3-phosphate reductase | - |
| QQA24_RS18950 (3897368) | 3897368..3897862 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| QQA24_RS18955 (3898053) | 3898053..3898937 | + | 885 | WP_000018760.1 | putative oxidoreductase YghA | VF |
| QQA24_RS18960 (3899209) | 3899209..3899634 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| QQA24_RS18965 (3899641) | 3899641..3900375 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| QQA24_RS18970 (3900627) | 3900627..3901814 | + | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| QQA24_RS18975 (3901954) | 3901954..3902613 | + | 660 | WP_000268419.1 | DedA family general envelope maintenance protein YghB | - |
| QQA24_RS18980 (3902653) | 3902653..3903552 | - | 900 | WP_024261679.1 | DNA-binding transcriptional regulator YqhC | - |
| QQA24_RS18985 (3903746) | 3903746..3904909 | + | 1164 | WP_001058813.1 | alcohol dehydrogenase | - |
| QQA24_RS18990 (3905014) | 3905014..3905841 | + | 828 | WP_001533557.1 | 2,5-didehydrogluconate reductase DkgA | - |
| QQA24_RS18995 (3906041) | 3906041..3906967 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| QQA24_RS19000 (3907018) | 3907018..3907275 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|