MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP126944 Location: 4344331..4360875 Organism: Escherichia coli O1:K1:H7 strain APEC E16002 Replicon: chromosome
Accession: NZ_CP126944 Location: 4344331..4360875 Organism: Escherichia coli O1:K1:H7 strain APEC E16002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA28_RS21460 (4340854) | 4340854..4341579 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| QQA28_RS21465 (4341616) | 4341616..4342155 | - | 540 | WP_000824098.1 | fimbrial protein | - |
| QQA28_RS21470 (4342220) | 4342220..4342774 | - | 555 | WP_000695580.1 | type 1 fimbrial major subunit FimA | - |
| QQA28_RS21475 (4343257) | 4343257..4343853 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| QQA28_RS21480 (4344331) | 4344331..4344933 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| QQA28_RS21485 (4346389) | 4346389..4347105 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QQA28_RS21490 (4347125) | 4347125..4348231 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| QQA28_RS21495 (4348296) | 4348296..4349276 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| QQA28_RS21500 (4349386) | 4349386..4349591 | + | 206 | Protein_4214 | HNH endonuclease | - |
| QQA28_RS21505 (4349859) | 4349859..4351099 | - | 1241 | Protein_4215 | helicase YjhR | - |
| QQA28_RS21510 (4351215) | 4351215..4351346 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| QQA28_RS21515 (4351837) | 4351837..4352094 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| QQA28_RS21520 (4352106) | 4352106..4352651 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| QQA28_RS21525 (4352707) | 4352707..4353453 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| QQA28_RS21530 (4353622) | 4353622..4353840 | + | 219 | Protein_4220 | hypothetical protein | - |
| QQA28_RS21535 (4353878) | 4353878..4353994 | + | 117 | Protein_4221 | VOC family protein | - |
| QQA28_RS21540 (4354239) | 4354239..4355360 | + | 1122 | WP_000010830.1 | M42 family metallopeptidase | - |
| QQA28_RS21545 (4355357) | 4355357..4355635 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| QQA28_RS21550 (4355647) | 4355647..4356960 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| QQA28_RS21555 (4356973) | 4356973..4357779 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| QQA28_RS21560 (4357910) | 4357910..4358341 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| QQA28_RS21565 (4358353) | 4358353..4358985 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| QQA28_RS21570 (4359002) | 4359002..4359784 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| QQA28_RS21575 (4360087) | 4360087..4360875 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| QQA28_RS21580 (4360880) | 4360880..4361785 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| QQA28_RS21585 (4361796) | 4361796..4363763 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| QQA28_RS21590 (4363870) | 4363870..4365219 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|