MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP126944 Location: 3905884..3926238 Organism: Escherichia coli O1:K1:H7 strain APEC E16002 Replicon: chromosome
Accession: NZ_CP126944 Location: 3905884..3926238 Organism: Escherichia coli O1:K1:H7 strain APEC E16002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA28_RS19360 (3901249) | 3901249..3901707 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| QQA28_RS19365 (3901968) | 3901968..3903425 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| QQA28_RS19370 (3903482) | 3903482..3904096 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| QQA28_RS19375 (3904093) | 3904093..3905232 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| QQA28_RS19380 (3905422) | 3905422..3905874 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| QQA28_RS19385 (3905884) | 3905884..3906282 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QQA28_RS19390 (3906285) | 3906285..3906578 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QQA28_RS19395 (3906630) | 3906630..3907685 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| QQA28_RS19400 (3907756) | 3907756..3908541 | - | 786 | WP_000207544.1 | hypothetical protein | VF |
| QQA28_RS19405 (3908513) | 3908513..3910225 | + | 1713 | Protein_3805 | Flagellar biosynthesis protein FlhA | VF |
| QQA28_RS19410 (3910304) | 3910304..3910462 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| QQA28_RS19415 (3910545) | 3910545..3911042 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| QQA28_RS19420 (3911218) | 3911218..3911967 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| QQA28_RS19425 (3912279) | 3912279..3913019 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QQA28_RS19430 (3912990) | 3912990..3913757 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| QQA28_RS19435 (3913962) | 3913962..3914540 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| QQA28_RS19440 (3914780) | 3914780..3917224 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| QQA28_RS19445 (3917267) | 3917267..3917713 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| QQA28_RS19450 (3917894) | 3917894..3918664 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| QQA28_RS19455 (3918715) | 3918715..3918909 | - | 195 | Protein_3815 | ISAs1 family transposase | - |
| QQA28_RS19460 (3918935) | 3918935..3919414 | - | 480 | WP_119682455.1 | integrating conjugative element protein | - |
| QQA28_RS19465 (3919517) | 3919517..3920020 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| QQA28_RS19470 (3920249) | 3920249..3921013 | - | 765 | Protein_3818 | ISAs1 family transposase ISEc1 | Transposase |
| QQA28_RS19475 (3921271) | 3921271..3921561 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| QQA28_RS19480 (3921536) | 3921536..3922975 | - | 1440 | WP_000528853.1 | DUF4150 domain-containing protein | - |
| QQA28_RS19485 (3922968) | 3922968..3924014 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| QQA28_RS19490 (3924121) | 3924121..3926103 | - | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| QQA28_RS19495 (3926324) | 3926324..3926842 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| QQA28_RS19500 (3927552) | 3927552..3928055 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| QQA28_RS19505 (3928078) | 3928078..3929562 | + | 1485 | WP_289251543.1 | type VI secretion system contractile sheath large subunit | - |
| QQA28_RS19510 (3929567) | 3929567..3929992 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|