MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP126942 Location: 4343840..4360384 Organism: Escherichia coli O1:K1:H7 strain APEC E18006 Replicon: chromosome
Accession: NZ_CP126942 Location: 4343840..4360384 Organism: Escherichia coli O1:K1:H7 strain APEC E18006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA29_RS21455 (4340363) | 4340363..4341088 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| QQA29_RS21460 (4341125) | 4341125..4341664 | - | 540 | WP_000824098.1 | fimbrial protein | - |
| QQA29_RS21465 (4341729) | 4341729..4342283 | - | 555 | WP_000695580.1 | type 1 fimbrial major subunit FimA | - |
| QQA29_RS21470 (4342766) | 4342766..4343362 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| QQA29_RS21475 (4343840) | 4343840..4344442 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| QQA29_RS21480 (4345898) | 4345898..4346614 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QQA29_RS21485 (4346634) | 4346634..4347740 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| QQA29_RS21490 (4347805) | 4347805..4348785 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| QQA29_RS21495 (4348895) | 4348895..4349100 | + | 206 | Protein_4213 | HNH endonuclease | - |
| QQA29_RS21500 (4349368) | 4349368..4350608 | - | 1241 | Protein_4214 | helicase YjhR | - |
| QQA29_RS21505 (4350724) | 4350724..4350855 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| QQA29_RS21510 (4351346) | 4351346..4351603 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| QQA29_RS21515 (4351615) | 4351615..4352160 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| QQA29_RS21520 (4352216) | 4352216..4352962 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| QQA29_RS21525 (4353131) | 4353131..4353349 | + | 219 | Protein_4219 | hypothetical protein | - |
| QQA29_RS21530 (4353387) | 4353387..4353503 | + | 117 | Protein_4220 | VOC family protein | - |
| QQA29_RS21535 (4353748) | 4353748..4354869 | + | 1122 | WP_000010830.1 | M42 family metallopeptidase | - |
| QQA29_RS21540 (4354866) | 4354866..4355144 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| QQA29_RS21545 (4355156) | 4355156..4356469 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| QQA29_RS21550 (4356482) | 4356482..4357288 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| QQA29_RS21555 (4357419) | 4357419..4357850 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| QQA29_RS21560 (4357862) | 4357862..4358494 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| QQA29_RS21565 (4358511) | 4358511..4359293 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| QQA29_RS21570 (4359596) | 4359596..4360384 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| QQA29_RS21575 (4360389) | 4360389..4361294 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| QQA29_RS21580 (4361305) | 4361305..4363272 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| QQA29_RS21585 (4363379) | 4363379..4364728 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|