MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP126942 Location: 3905394..3925748 Organism: Escherichia coli O1:K1:H7 strain APEC E18006 Replicon: chromosome
Accession: NZ_CP126942 Location: 3905394..3925748 Organism: Escherichia coli O1:K1:H7 strain APEC E18006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA29_RS19355 (3900759) | 3900759..3901217 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| QQA29_RS19360 (3901478) | 3901478..3902935 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| QQA29_RS19365 (3902992) | 3902992..3903606 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| QQA29_RS19370 (3903603) | 3903603..3904742 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| QQA29_RS19375 (3904932) | 3904932..3905384 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| QQA29_RS19380 (3905394) | 3905394..3905792 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QQA29_RS19385 (3905795) | 3905795..3906088 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QQA29_RS19390 (3906140) | 3906140..3907195 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| QQA29_RS19395 (3907266) | 3907266..3908051 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| QQA29_RS19400 (3908023) | 3908023..3909735 | + | 1713 | Protein_3804 | Flagellar biosynthesis protein FlhA | VF |
| QQA29_RS19405 (3909814) | 3909814..3909972 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| QQA29_RS19410 (3910055) | 3910055..3910552 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| QQA29_RS19415 (3910728) | 3910728..3911477 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| QQA29_RS19420 (3911789) | 3911789..3912529 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QQA29_RS19425 (3912500) | 3912500..3913267 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| QQA29_RS19430 (3913472) | 3913472..3914050 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| QQA29_RS19435 (3914290) | 3914290..3916734 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| QQA29_RS19440 (3916777) | 3916777..3917223 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| QQA29_RS19445 (3917404) | 3917404..3918174 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| QQA29_RS19450 (3918225) | 3918225..3918419 | - | 195 | Protein_3814 | ISAs1 family transposase | - |
| QQA29_RS19455 (3918445) | 3918445..3918924 | - | 480 | WP_119682455.1 | integrating conjugative element protein | - |
| QQA29_RS19460 (3919027) | 3919027..3919530 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| QQA29_RS19465 (3919759) | 3919759..3920523 | - | 765 | Protein_3817 | ISAs1 family transposase ISEc1 | Transposase |
| QQA29_RS19470 (3920781) | 3920781..3921071 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| QQA29_RS19475 (3921046) | 3921046..3922485 | - | 1440 | WP_000528853.1 | DUF4150 domain-containing protein | - |
| QQA29_RS19480 (3922478) | 3922478..3923524 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| QQA29_RS19485 (3923631) | 3923631..3925613 | - | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| QQA29_RS19490 (3925834) | 3925834..3926352 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| QQA29_RS19495 (3927062) | 3927062..3927565 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| QQA29_RS19500 (3927588) | 3927588..3929072 | + | 1485 | WP_289251543.1 | type VI secretion system contractile sheath large subunit | - |
| QQA29_RS19505 (3929077) | 3929077..3929502 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|