MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP126940 Location: 3951205..3971559 Organism: Escherichia coli O2:K1:H7 strain APEC E18055 Replicon: chromosome
Accession: NZ_CP126940 Location: 3951205..3971559 Organism: Escherichia coli O2:K1:H7 strain APEC E18055 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA30_RS19610 (3946570) | 3946570..3947028 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| QQA30_RS19615 (3947289) | 3947289..3948746 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| QQA30_RS19620 (3948803) | 3948803..3949417 | - | 615 | WP_231528506.1 | peptide chain release factor H | - |
| QQA30_RS19625 (3949414) | 3949414..3950553 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| QQA30_RS19630 (3950743) | 3950743..3951195 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| QQA30_RS19635 (3951205) | 3951205..3951603 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QQA30_RS19640 (3951606) | 3951606..3951899 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QQA30_RS19645 (3951951) | 3951951..3953006 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| QQA30_RS19650 (3953077) | 3953077..3953862 | - | 786 | WP_000207544.1 | hypothetical protein | VF |
| QQA30_RS19655 (3953834) | 3953834..3955546 | + | 1713 | Protein_3853 | Flagellar biosynthesis protein FlhA | VF |
| QQA30_RS19660 (3955625) | 3955625..3955783 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| QQA30_RS19665 (3955866) | 3955866..3956363 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| QQA30_RS19670 (3956539) | 3956539..3957288 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| QQA30_RS19675 (3957600) | 3957600..3958340 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QQA30_RS19680 (3958311) | 3958311..3959078 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| QQA30_RS19685 (3959283) | 3959283..3959861 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| QQA30_RS19690 (3960101) | 3960101..3962545 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| QQA30_RS19695 (3962588) | 3962588..3963034 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| QQA30_RS19700 (3963215) | 3963215..3963985 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| QQA30_RS19705 (3964036) | 3964036..3964230 | - | 195 | Protein_3863 | ISAs1 family transposase | - |
| QQA30_RS19710 (3964256) | 3964256..3964744 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| QQA30_RS19715 (3964838) | 3964838..3965341 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| QQA30_RS19720 (3965570) | 3965570..3966334 | - | 765 | Protein_3866 | ISAs1 family transposase ISEc1 | Transposase |
| QQA30_RS19725 (3966592) | 3966592..3966882 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| QQA30_RS19730 (3966857) | 3966857..3968296 | - | 1440 | WP_000528853.1 | DUF4150 domain-containing protein | - |
| QQA30_RS19735 (3968289) | 3968289..3969335 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| QQA30_RS19740 (3969442) | 3969442..3971424 | - | 1983 | WP_021524646.1 | Actin cross-linking toxin VgrG1 | VF |
| QQA30_RS19745 (3971645) | 3971645..3972163 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| QQA30_RS19750 (3972869) | 3972869..3973372 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| QQA30_RS19755 (3973395) | 3973395..3974879 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| QQA30_RS19760 (3974884) | 3974884..3975309 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|