MGE detailed information
MGE type: Genomic_island MGE length: 20354 bp
Accession: NZ_CP126937 Location: 3761106..3781459 Organism: Escherichia coli O2:K1:H4 strain APEC E19019 Replicon: chromosome
Accession: NZ_CP126937 Location: 3761106..3781459 Organism: Escherichia coli O2:K1:H4 strain APEC E19019 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA31_RS18380 (3756471) | 3756471..3756929 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| QQA31_RS18385 (3757190) | 3757190..3758647 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| QQA31_RS18390 (3758704) | 3758704..3759318 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| QQA31_RS18395 (3759315) | 3759315..3760454 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| QQA31_RS18400 (3760644) | 3760644..3761096 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| QQA31_RS18405 (3761106) | 3761106..3761504 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QQA31_RS18410 (3761507) | 3761507..3761800 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QQA31_RS18415 (3761852) | 3761852..3762907 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| QQA31_RS18420 (3762978) | 3762978..3763763 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| QQA31_RS18425 (3763735) | 3763735..3765447 | + | 1713 | Protein_3611 | Flagellar biosynthesis protein FlhA | VF |
| QQA31_RS18430 (3765526) | 3765526..3765684 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| QQA31_RS18435 (3765767) | 3765767..3766264 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| QQA31_RS18440 (3766440) | 3766440..3767189 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| QQA31_RS18445 (3767501) | 3767501..3768241 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QQA31_RS18450 (3768212) | 3768212..3768979 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| QQA31_RS18455 (3769184) | 3769184..3769762 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| QQA31_RS18460 (3770002) | 3770002..3772446 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| QQA31_RS18465 (3772489) | 3772489..3772935 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| QQA31_RS18470 (3773116) | 3773116..3773886 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| QQA31_RS18475 (3773937) | 3773937..3774131 | - | 195 | Protein_3621 | ISAs1 family transposase | - |
| QQA31_RS18480 (3774157) | 3774157..3774645 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| QQA31_RS18485 (3774856) | 3774856..3775242 | - | 387 | WP_001513602.1 | hypothetical protein | - |
| QQA31_RS18490 (3775471) | 3775471..3776235 | - | 765 | Protein_3624 | ISAs1 family transposase ISEc1 | Transposase |
| QQA31_RS18495 (3776493) | 3776493..3776783 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| QQA31_RS18500 (3776758) | 3776758..3778197 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| QQA31_RS18505 (3778190) | 3778190..3779236 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| QQA31_RS18510 (3779343) | 3779343..3781324 | - | 1982 | Protein_3628 | Actin cross-linking toxin VgrG1 | VF |
| QQA31_RS18515 (3781545) | 3781545..3782063 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| QQA31_RS18520 (3782769) | 3782769..3783272 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| QQA31_RS18525 (3783295) | 3783295..3784779 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| QQA31_RS18530 (3784784) | 3784784..3785209 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|