MGE detailed information
MGE type: Prophage MGE length: 29786 bp
Accession: NZ_CP126934 Location: 949962..979747 Organism: Escherichia coli O78:H4 strain APEC E19057 Replicon: chromosome
Accession: NZ_CP126934 Location: 949962..979747 Organism: Escherichia coli O78:H4 strain APEC E19057 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA26_RS04730 (945951) | 945951..945998 | + | 48 | WP_211180494.1 | protein YnaN | - |
| QQA26_RS04735 (946012) | 946012..946995 | + | 984 | WP_000387395.1 | zinc transporter ZntB | - |
| QQA26_RS04740 (947270) | 947270..947443 | + | 174 | WP_001296046.1 | protein YnaL | - |
| QQA26_RS04745 (947473) | 947473..948846 | + | 1374 | WP_000123718.1 | ATP-dependent RNA helicase DbpA | - |
| QQA26_RS04750 (948975) | 948975..949910 | - | 936 | WP_001153728.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| QQA26_RS04755 (949962) | 949962..951197 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QQA26_RS04760 (951199) | 951199..951414 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (951518) | 951518..951696 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (951518) | 951518..951696 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (951518) | 951518..951696 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (951518) | 951518..951696 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| QQA26_RS04765 (951493) | 951493..951702 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| QQA26_RS04770 (951695) | 951695..951889 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| QQA26_RS04775 (951946) | 951946..952755 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| QQA26_RS04780 (952748) | 952748..955348 | - | 2601 | WP_130563186.1 | exodeoxyribonuclease VIII | - |
| QQA26_RS04785 (955450) | 955450..955725 | - | 276 | WP_000632297.1 | protein RacC | - |
| QQA26_RS04790 (955800) | 955800..955970 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| QQA26_RS04795 (955970) | 955970..956191 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| QQA26_RS04800 (956633) | 956633..957121 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| QQA26_RS04805 (957118) | 957118..957273 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| QQA26_RS04810 (957284) | 957284..957418 | - | 135 | WP_000233809.1 | phage protein | - |
| QQA26_RS04815 (957727) | 957727..958203 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| QQA26_RS04820 (958327) | 958327..958623 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| QQA26_RS04825 (958646) | 958646..959068 | + | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| QQA26_RS04830 (959081) | 959081..959938 | + | 858 | WP_000899746.1 | YdaU family protein | - |
| QQA26_RS04835 (959945) | 959945..960691 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| QQA26_RS04840 (960714) | 960714..961475 | + | 762 | WP_040091719.1 | DUF1627 domain-containing protein | - |
| QQA26_RS04845 (961491) | 961491..961895 | + | 405 | WP_040091718.1 | DUF977 family protein | - |
| QQA26_RS04850 (961995) | 961995..964445 | - | 2451 | WP_040091717.1 | hypothetical protein | - |
| QQA26_RS04855 (965124) | 965124..965723 | + | 600 | WP_000940342.1 | DUF1367 family protein | - |
| QQA26_RS04860 (965723) | 965723..966013 | + | 291 | WP_000247764.1 | DUF1364 domain-containing protein | - |
| QQA26_RS04865 (966010) | 966010..966552 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| QQA26_RS04870 (967765) | 967765..968025 | + | 261 | Protein_950 | cell envelope integrity protein TolA | - |
| QQA26_RS04875 (968197) | 968197..968571 | + | 375 | WP_001348108.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| QQA26_RS04880 (968823) | 968823..969038 | + | 216 | WP_044502202.1 | phage lysis protein EssD | - |
| QQA26_RS04885 (969043) | 969043..969387 | + | 345 | WP_000193293.1 | YdfR family protein | - |
| QQA26_RS04890 (969353) | 969353..969625 | - | 273 | WP_000370551.1 | hypothetical protein | - |
| QQA26_RS04895 (969731) | 969731..970264 | + | 534 | WP_000992105.1 | lysozyme | - |
| QQA26_RS04900 (970481) | 970481..970666 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| QQA26_RS04905 (970863) | 970863..972320 | + | 1458 | WP_024165216.1 | Trk system potassium transporter TrkG | - |
| QQA26_RS04910 (972458) | 972458..973249 | + | 792 | WP_001291093.1 | ParB/Srx family N-terminal domain-containing protein | - |
| QQA26_RS04915 (973242) | 973242..974174 | + | 933 | WP_001204035.1 | hypothetical protein | - |
| QQA26_RS04920 (974152) | 974152..974361 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| QQA26_RS04925 (974365) | 974365..975459 | + | 1095 | WP_000089446.1 | terminase small subunit | - |
| QQA26_RS04930 (975440) | 975440..976741 | + | 1302 | WP_000625347.1 | terminase family protein | - |
| QQA26_RS04935 (976744) | 976744..978150 | + | 1407 | WP_000763708.1 | DUF4055 domain-containing protein | - |
| QQA26_RS04940 (978134) | 978134..978349 | + | 216 | Protein_964 | hypothetical protein | - |
| QQA26_RS04945 (978350) | 978350..978484 | + | 135 | Protein_965 | tail fiber protein | - |
| QQA26_RS04950 (978484) | 978484..979059 | + | 576 | WP_000885599.1 | tail fiber assembly protein | - |
| QQA26_RS04955 (979157) | 979157..979747 | - | 591 | WP_000086519.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QQA26_RS04960 (980064) | 980064..980297 | - | 234 | WP_000836772.1 | cold shock protein YdfK | - |
| QQA26_RS04965 (980366) | 980366..980479 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QQA26_RS04970 (981256) | 981256..981690 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| QQA26_RS04975 (981831) | 981831..982964 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|