MGE detailed information
MGE type: Prophage MGE length: 57114 bp
Accession: NZ_CP126934 Location: 1475840..1532953 Organism: Escherichia coli O78:H4 strain APEC E19057 Replicon: chromosome
Accession: NZ_CP126934 Location: 1475840..1532953 Organism: Escherichia coli O78:H4 strain APEC E19057 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA26_RS07400 () | 1471280..1472653 | + | 1374 | WP_001127216.1 | MFS transporter | - |
| QQA26_RS07405 () | 1472699..1473580 | - | 882 | WP_000984517.1 | protease HtpX | - |
| QQA26_RS07410 () | 1473772..1475820 | - | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| QQA26_RS07415 () | 1475840..1476538 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| QQA26_RS07420 () | 1476635..1477132 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| QQA26_RS07425 () | 1477262..1478545 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| QQA26_RS07430 () | 1478514..1481147 | + | 2634 | WP_001356288.1 | Intermembrane transport protein YebT | VF |
| QQA26_RS07435 () | 1481227..1482666 | + | 1440 | WP_000057023.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QQA26_RS07440 () | 1482784..1483020 | + | 237 | WP_001295499.1 | YebV family protein | - |
| QQA26_RS07445 () | 1483125..1483316 | + | 192 | WP_001296140.1 | YebW family protein | - |
| QQA26_RS07450 () | 1483317..1483973 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| QQA26_RS07455 () | 1484478..1485041 | - | 564 | WP_289266601.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QQA26_RS07460 () | 1485118..1485606 | + | 489 | WP_001486660.1 | phage tail protein | - |
| QQA26_RS07465 () | 1485606..1486055 | + | 450 | Protein_1466 | tail fiber assembly protein | - |
| QQA26_RS07470 () | 1486132..1486536 | - | 405 | WP_001175008.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| QQA26_RS07475 () | 1486595..1487821 | + | 1227 | WP_001672025.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| QQA26_RS07480 () | 1487874..1488026 | + | 153 | Protein_1469 | tail fiber assembly protein | - |
| QQA26_RS07485 () | 1487998..1488417 | - | 420 | WP_000376436.1 | tail assembly chaperone | - |
| QQA26_RS07490 () | 1488421..1489119 | - | 699 | WP_032332159.1 | hypothetical protein | - |
| QQA26_RS07495 () | 1489119..1489799 | - | 681 | WP_000049950.1 | DUF2612 domain-containing protein | - |
| QQA26_RS07500 () | 1489796..1490995 | - | 1200 | WP_064638162.1 | baseplate J/gp47 family protein | - |
| QQA26_RS07505 () | 1490995..1491348 | - | 354 | WP_001270632.1 | hypothetical protein | - |
| QQA26_RS07510 () | 1491348..1492100 | - | 753 | WP_042093538.1 | Gp138 family membrane-puncturing spike protein | - |
| QQA26_RS07515 () | 1492160..1492399 | - | 240 | WP_000466689.1 | DUF4282 domain-containing protein | - |
| QQA26_RS07520 () | 1492453..1492800 | - | 348 | WP_160527408.1 | hypothetical protein | - |
| QQA26_RS07525 () | 1492797..1493864 | - | 1068 | WP_160527407.1 | hypothetical protein | - |
| QQA26_RS07530 () | 1493867..1494169 | - | 303 | WP_096938446.1 | hypothetical protein | - |
| QQA26_RS07535 () | 1494169..1494756 | - | 588 | WP_001298404.1 | hypothetical protein | - |
| QQA26_RS07540 () | 1494756..1496741 | - | 1986 | WP_033544657.1 | lytic transglycosylase catalytic | - |
| QQA26_RS07545 () | 1496722..1496859 | - | 138 | WP_226109682.1 | hypothetical protein | - |
| QQA26_RS07550 () | 1496919..1497371 | - | 453 | WP_033544656.1 | hypothetical protein | - |
| QQA26_RS07555 () | 1497375..1497815 | - | 441 | WP_000109249.1 | DUF3277 family protein | - |
| QQA26_RS07560 () | 1497826..1498971 | - | 1146 | WP_033544655.1 | DUF3383 family protein | - |
| QQA26_RS07565 () | 1498975..1499538 | - | 564 | WP_033544654.1 | hypothetical protein | - |
| QQA26_RS07570 () | 1499513..1499902 | - | 390 | WP_001142480.1 | hypothetical protein | - |
| QQA26_RS07575 () | 1499889..1500443 | - | 555 | WP_000008724.1 | hypothetical protein | - |
| QQA26_RS07580 () | 1500440..1500847 | - | 408 | WP_032312112.1 | DUF4054 domain-containing protein | - |
| QQA26_RS07585 () | 1500813..1501181 | - | 369 | WP_001040697.1 | hypothetical protein | - |
| QQA26_RS07590 () | 1501222..1502163 | - | 942 | WP_000627490.1 | DUF2184 domain-containing protein | - |
| QQA26_RS07595 () | 1502175..1502681 | - | 507 | WP_001066727.1 | hypothetical protein | - |
| QQA26_RS07600 () | 1502685..1503905 | - | 1221 | WP_042093526.1 | DUF2213 domain-containing protein | - |
| QQA26_RS07605 () | 1503920..1504654 | - | 735 | WP_160527406.1 | phage minor head protein | - |
| QQA26_RS07610 () | 1504545..1506011 | - | 1467 | WP_072650417.1 | DUF1073 domain-containing protein | - |
| QQA26_RS07615 () | 1506011..1507414 | - | 1404 | WP_000204763.1 | PBSX family phage terminase large subunit | - |
| QQA26_RS07620 () | 1507380..1508129 | - | 750 | WP_021572526.1 | hypothetical protein | - |
| QQA26_RS07625 () | 1508187..1508372 | - | 186 | WP_033544649.1 | hypothetical protein | - |
| QQA26_RS07630 () | 1508353..1508631 | - | 279 | WP_224729216.1 | hypothetical protein | - |
| QQA26_RS07635 () | 1508516..1508908 | - | 393 | WP_021572524.1 | DUF2570 domain-containing protein | - |
| QQA26_RS07640 () | 1508892..1509368 | - | 477 | WP_001194114.1 | glycoside hydrolase family protein | - |
| QQA26_RS07645 () | 1509372..1509707 | - | 336 | WP_001533367.1 | phage holin, lambda family | - |
| QQA26_RS07650 () | 1510204..1510785 | - | 582 | WP_052894474.1 | ORF6N domain-containing protein | - |
| QQA26_RS07655 () | 1511058..1511612 | - | 555 | WP_076487079.1 | DUF1133 family protein | - |
| QQA26_RS07660 () | 1511609..1511899 | - | 291 | WP_042973273.1 | DUF1364 domain-containing protein | - |
| QQA26_RS07665 () | 1511899..1512498 | - | 600 | WP_063075209.1 | DUF1367 family protein | - |
| QQA26_RS07670 () | 1512570..1512782 | - | 213 | WP_000411312.1 | hypothetical protein | - |
| QQA26_RS07675 () | 1513270..1515720 | + | 2451 | WP_040091717.1 | hypothetical protein | - |
| QQA26_RS07680 () | 1515820..1516224 | - | 405 | WP_040091718.1 | DUF977 family protein | - |
| QQA26_RS07685 () | 1516240..1517001 | - | 762 | WP_289266602.1 | DUF1627 domain-containing protein | - |
| QQA26_RS07690 () | 1517024..1517770 | - | 747 | WP_021572514.1 | ATP-binding protein | - |
| QQA26_RS07695 () | 1517777..1518565 | - | 789 | WP_289266603.1 | hypothetical protein | - |
| QQA26_RS07700 () | 1518643..1519065 | - | 423 | WP_111997642.1 | toxin YdaT family protein | - |
| QQA26_RS07705 () | 1519062..1519304 | - | 243 | WP_001033914.1 | helix-turn-helix transcriptional regulator | - |
| QQA26_RS07710 () | 1519401..1519820 | + | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| QQA26_RS07715 () | 1520120..1520338 | + | 219 | WP_000232638.1 | hypothetical protein | - |
| QQA26_RS07720 () | 1520304..1520498 | - | 195 | WP_072650407.1 | hypothetical protein | - |
| QQA26_RS07725 () | 1520908..1521129 | + | 222 | WP_000560223.1 | killing protein KilR | - |
| QQA26_RS07730 () | 1521129..1521299 | + | 171 | WP_065336296.1 | YdaE family protein | - |
| QQA26_RS07735 () | 1521374..1521648 | + | 275 | Protein_1520 | hypothetical protein | - |
| QQA26_RS07740 () | 1521747..1524422 | + | 2676 | WP_289266604.1 | exodeoxyribonuclease VIII | - |
| QQA26_RS07745 () | 1524415..1525224 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| QQA26_RS07750 () | 1525281..1525475 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| QQA26_RS07755 () | 1525468..1525656 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 1525474..1525652 | - | 179 | NuclAT_1 | - | - |
| - () | 1525474..1525652 | - | 179 | NuclAT_1 | - | - |
| - () | 1525474..1525652 | - | 179 | NuclAT_1 | - | - |
| - () | 1525474..1525652 | - | 179 | NuclAT_1 | - | - |
| QQA26_RS07760 () | 1525763..1526044 | + | 282 | WP_001311878.1 | excisionase | - |
| QQA26_RS07765 () | 1526010..1527086 | + | 1077 | WP_001189091.1 | hypothetical protein ; Integrase | Integrase |
| - | 1527217..1527451 | + | 235 | - | - | Antitoxin Detail |
| - | 1527218..1527321 | - | 104 | - | - | Toxin Detail |
| QQA26_RS07770 () | 1527479..1527820 | - | 342 | WP_000976492.1 | YebY family protein | - |
| QQA26_RS07775 () | 1527833..1528705 | - | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| QQA26_RS07780 () | 1528709..1529083 | - | 375 | WP_069024793.1 | CopC domain-containing protein YobA | - |
| QQA26_RS07785 () | 1529222..1529452 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QQA26_RS07790 () | 1529554..1530210 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QQA26_RS07795 () | 1530234..1530896 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QQA26_RS07800 () | 1530893..1532953 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| QQA26_RS07805 () | 1533162..1533821 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| QQA26_RS07810 () | 1534148..1534504 | - | 357 | WP_001295500.1 | protein YebF | - |
| QQA26_RS07815 () | 1534571..1534861 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QQA26_RS07820 () | 1534995..1536173 | + | 1179 | WP_000173475.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QQA26_RS07825 () | 1536229..1536870 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|