MGE detailed information
MGE type: Genomic_island MGE length: 59828 bp
Accession: NZ_CP126931 Location: 4549047..4608874 Organism: Escherichia coli O78:H51 strain APEC E19025 Replicon: chromosome
Accession: NZ_CP126931 Location: 4549047..4608874 Organism: Escherichia coli O78:H51 strain APEC E19025 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA25_RS22195 (4545188) | 4545188..4546102 | + | 915 | Protein_4344 | transposase | - |
| QQA25_RS22200 (4546577) | 4546577..4547194 | - | 618 | Protein_4345 | LysR substrate-binding domain-containing protein | - |
| QQA25_RS22205 (4547242) | 4547242..4548455 | + | 1214 | WP_162842841.1 | IS3 family transposase | - |
| QQA25_RS22210 (4548488) | 4548488..4548700 | + | 213 | Protein_4347 | transposase | - |
| QQA25_RS22215 (4548868) | 4548868..4549011 | - | 144 | WP_001767846.1 | hypothetical protein | - |
| QQA25_RS22220 (4549047) | 4549047..4551734 | - | 2688 | WP_039023532.1 | autotransporter domain-containing protein | - |
| QQA25_RS22225 (4551744) | 4551744..4554143 | - | 2400 | WP_024210505.1 | hypothetical protein | VF |
| QQA25_RS22230 (4554162) | 4554162..4555166 | - | 1005 | WP_001767848.1 | hypothetical protein | - |
| QQA25_RS22235 (4555211) | 4555211..4556668 | - | 1458 | WP_077250607.1 | DUF2264 domain-containing protein | - |
| QQA25_RS22240 (4556702) | 4556702..4557736 | - | 1035 | WP_001696169.1 | glycoside hydrolase family 88 protein | - |
| QQA25_RS22245 (4557817) | 4557817..4558254 | - | 438 | WP_001696170.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| QQA25_RS22250 (4558264) | 4558264..4559130 | - | 867 | WP_001767853.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| QQA25_RS22255 (4559120) | 4559120..4559890 | - | 771 | WP_001696172.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| QQA25_RS22260 (4559909) | 4559909..4560382 | - | 474 | WP_001696173.1 | PTS sugar transporter subunit IIB | - |
| QQA25_RS22265 (4560500) | 4560500..4561288 | - | 789 | WP_001696174.1 | DeoR family transcriptional regulator | - |
| QQA25_RS22270 (4561800) | 4561800..4562174 | - | 375 | Protein_4359 | integrase core domain-containing protein | - |
| QQA25_RS22275 (4562373) | 4562373..4563601 | + | 1229 | WP_289257070.1 | IS3 family transposase IS2 | Transposase |
| QQA25_RS22280 (4563846) | 4563846..4564169 | - | 324 | WP_001696527.1 | cupin domain-containing protein | - |
| QQA25_RS22285 (4564224) | 4564224..4565024 | - | 801 | WP_000345753.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| QQA25_RS22290 (4565054) | 4565054..4566208 | - | 1155 | WP_032297239.1 | oligogalacturonate lyase family protein | - |
| QQA25_RS22295 (4566481) | 4566481..4567119 | + | 639 | WP_000684812.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| QQA25_RS22300 (4567370) | 4567370..4567618 | - | 249 | WP_039023560.1 | AlpA family transcriptional regulator | - |
| QQA25_RS22305 (4567687) | 4567687..4568259 | - | 573 | WP_039023561.1 | hypothetical protein | - |
| QQA25_RS22310 (4568506) | 4568506..4568982 | - | 477 | Protein_4367 | inovirus-type Gp2 protein | - |
| QQA25_RS22315 (4569089) | 4569089..4570297 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| QQA25_RS22320 (4570313) | 4570313..4570432 | - | 120 | Protein_4369 | LysR family transcriptional regulator | - |
| QQA25_RS22325 (4570663) | 4570663..4571868 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| QQA25_RS22330 (4572312) | 4572312..4572632 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| QQA25_RS22335 (4572625) | 4572625..4573011 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| QQA25_RS22340 (4573019) | 4573019..4573705 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| QQA25_RS22345 (4573683) | 4573683..4574306 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| QQA25_RS22350 (4574388) | 4574388..4575593 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| QQA25_RS22355 (4575706) | 4575706..4576299 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| QQA25_RS22360 (4576387) | 4576387..4576773 | + | 387 | Protein_4377 | Transposon Tn10 TetD protein | VF |
| QQA25_RS22365 (4576813) | 4576813..4578021 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| QQA25_RS22370 (4578091) | 4578091..4578228 | - | 138 | WP_001611300.1 | hypothetical protein | - |
| QQA25_RS22375 (4579364) | 4579364..4580577 | - | 1214 | Protein_4380 | IS3 family transposase | - |
| QQA25_RS22380 (4580615) | 4580615..4581779 | + | 1165 | Protein_4381 | IS256 family transposase ISSod4 | Transposase |
| QQA25_RS22385 (4581959) | 4581959..4584007 | - | 2049 | WP_000792543.1 | TonB-dependent siderophore receptor IreA | - |
| QQA25_RS22390 (4584200) | 4584200..4585428 | + | 1229 | WP_176256621.1 | IS3 family transposase IS2 | Transposase |
| QQA25_RS22395 (4585539) | 4585539..4586270 | - | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| QQA25_RS22400 (4586940) | 4586940..4587470 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| QQA25_RS22405 (4589090) | 4589090..4589944 | + | 855 | WP_000110727.1 | hypothetical protein | - |
| QQA25_RS22410 (4589941) | 4589941..4590903 | - | 963 | WP_000126799.1 | hypothetical protein | - |
| QQA25_RS22415 (4591009) | 4591009..4591893 | + | 885 | WP_289257071.1 | 50S ribosome-binding GTPase | - |
| QQA25_RS22420 (4592096) | 4592096..4592776 | + | 681 | WP_001593697.1 | WYL domain-containing protein | - |
| QQA25_RS22425 (4592924) | 4592924..4593601 | + | 678 | WP_001097306.1 | hypothetical protein | - |
| QQA25_RS22430 (4593607) | 4593607..4593840 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| QQA25_RS22435 (4593939) | 4593939..4594757 | + | 819 | WP_001234631.1 | DUF932 domain-containing protein | - |
| QQA25_RS22440 (4594839) | 4594839..4595318 | + | 480 | WP_000860065.1 | antirestriction protein | - |
| QQA25_RS22445 (4595330) | 4595330..4595806 | + | 477 | WP_001186709.1 | RadC family protein | - |
| QQA25_RS22450 (4595869) | 4595869..4596090 | + | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| QQA25_RS22455 (4596105) | 4596105..4596737 | + | 633 | Protein_4396 | antitoxin of toxin-antitoxin stability system | - |
| QQA25_RS22460 (4596787) | 4596787..4597155 | + | 369 | WP_039023579.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QQA25_RS22465 (4597246) | 4597246..4597656 | + | 411 | WP_039023580.1 | TA system toxin CbtA family protein | Toxin Detail |
| QQA25_RS22470 (4597619) | 4597619..4597768 | + | 150 | Protein_4399 | DUF5983 family protein | - |
| QQA25_RS22475 (4597844) | 4597844..4597981 | + | 138 | WP_096006700.1 | DUF957 domain-containing protein | - |
| QQA25_RS22480 (4598126) | 4598126..4598686 | + | 561 | Protein_4401 | DUF4942 domain-containing protein | - |
| QQA25_RS22485 (4599523) | 4599523..4601061 | + | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QQA25_RS22490 (4601427) | 4601427..4602761 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QQA25_RS22495 (4602841) | 4602841..4604988 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QQA25_RS22500 (4605047) | 4605047..4606504 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| QQA25_RS22505 (4606741) | 4606741..4608258 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QQA25_RS22510 (4608377) | 4608377..4608550 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QQA25_RS22515 (4608578) | 4608578..4608874 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QQA25_RS22520 (4609101) | 4609101..4609373 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QQA25_RS22525 (4609385) | 4609385..4609615 | - | 231 | WP_000371698.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QQA25_RS22530 (4609796) | 4609796..4611427 | + | 1632 | WP_001216461.1 | sensor histidine kinase | - |
| QQA25_RS22535 (4611424) | 4611424..4612143 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|