MGE detailed information
MGE type: Genomic_island MGE length: 57686 bp
Accession: NZ_CP126348 Location: 3956420..4014105 Organism: Escherichia coli strain NN5 Replicon: chromosome
Accession: NZ_CP126348 Location: 3956420..4014105 Organism: Escherichia coli strain NN5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN227_RS18885 (3952951) | 3952951..3953676 | - | 726 | WP_000066557.1 | type 1 fimbria chaperone FimC | - |
| QN227_RS18890 (3953713) | 3953713..3954252 | - | 540 | WP_077778739.1 | fimbrial protein | - |
| QN227_RS18895 (3954317) | 3954317..3954865 | - | 549 | WP_000695561.1 | type 1 fimbrial major subunit FimA | - |
| QN227_RS18900 (3955346) | 3955346..3955942 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| QN227_RS18905 (3956420) | 3956420..3957022 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| QN227_RS18910 (3958478) | 3958478..3959194 | + | 717 | WP_284556553.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QN227_RS18915 (3959214) | 3959214..3960320 | + | 1107 | WP_001044128.1 | N-acetylneuraminate epimerase | - |
| QN227_RS18920 (3960385) | 3960385..3961365 | + | 981 | WP_033557149.1 | sialate O-acetylesterase | - |
| QN227_RS18925 (3961373) | 3961373..3961477 | - | 105 | Protein_3698 | HNH endonuclease | - |
| QN227_RS18930 (3961577) | 3961577..3962449 | + | 873 | WP_033557147.1 | HNH endonuclease | - |
| QN227_RS18935 (3962560) | 3962560..3963558 | - | 999 | WP_033557146.1 | membrane protein | - |
| QN227_RS18940 (3964165) | 3964165..3964671 | + | 507 | WP_050516361.1 | hypothetical protein | - |
| QN227_RS18945 (3964699) | 3964699..3965861 | + | 1163 | WP_094081552.1 | IS3 family transposase ISEc17 | Transposase |
| QN227_RS18950 (3966163) | 3966163..3966504 | - | 342 | WP_033557155.1 | TA system toxin CbtA family protein | Toxin Detail |
| QN227_RS18955 (3966525) | 3966525..3966842 | - | 318 | WP_033557156.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QN227_RS18960 (3966897) | 3966897..3967030 | - | 134 | Protein_3705 | DUF987 family protein | - |
| QN227_RS18965 (3967039) | 3967039..3967515 | - | 477 | WP_033557157.1 | RadC family protein | - |
| QN227_RS18970 (3967531) | 3967531..3967989 | - | 459 | WP_033557158.1 | antirestriction protein | - |
| QN227_RS18975 (3968075) | 3968075..3968311 | - | 237 | WP_033557159.1 | DUF905 domain-containing protein | - |
| QN227_RS18980 (3968389) | 3968389..3968799 | - | 411 | WP_033557160.1 | hypothetical protein | - |
| QN227_RS18985 (3968866) | 3968866..3969303 | - | 438 | WP_033557163.1 | hypothetical protein | - |
| QN227_RS18990 (3969345) | 3969345..3969881 | - | 537 | WP_033557164.1 | DUF4339 domain-containing protein | - |
| QN227_RS18995 (3969907) | 3969907..3970617 | - | 711 | WP_033557166.1 | DeoR family transcriptional regulator | - |
| QN227_RS19000 (3970826) | 3970826..3971650 | - | 825 | WP_033557167.1 | DUF932 domain-containing protein | - |
| QN227_RS19005 (3971744) | 3971744..3972607 | - | 864 | WP_033557168.1 | GTPase family protein | - |
| QN227_RS19010 (3972703) | 3972703..3973443 | - | 741 | WP_033557169.1 | hypothetical protein | - |
| QN227_RS19015 (3973941) | 3973941..3974522 | + | 582 | WP_033557170.1 | inovirus-type Gp2 protein | - |
| QN227_RS19020 (3974627) | 3974627..3974839 | + | 213 | WP_033557171.1 | helix-turn-helix domain-containing protein | - |
| QN227_RS19025 (3974940) | 3974940..3975473 | + | 534 | WP_033557172.1 | hypothetical protein | - |
| QN227_RS19030 (3975484) | 3975484..3975861 | + | 378 | WP_033557173.1 | putative zinc ribbon protein | - |
| QN227_RS19035 (3976185) | 3976185..3976760 | + | 576 | WP_033557174.1 | inovirus-type Gp2 protein | - |
| QN227_RS19040 (3976892) | 3976892..3979333 | + | 2442 | WP_033557175.1 | DEAD/DEAH box helicase family protein | - |
| QN227_RS19045 (3979406) | 3979406..3980878 | + | 1473 | WP_033557176.1 | N-6 DNA methylase | - |
| QN227_RS19050 (3980878) | 3980878..3982671 | + | 1794 | WP_033557177.1 | restriction endonuclease subunit S | - |
| QN227_RS19055 (3982716) | 3982716..3984617 | + | 1902 | WP_033557178.1 | AAA family ATPase | - |
| QN227_RS19060 (3984763) | 3984763..3985860 | + | 1098 | WP_033557179.1 | nuclease | - |
| QN227_RS19065 (3985901) | 3985901..3986719 | + | 819 | WP_050516363.1 | HNH endonuclease | - |
| QN227_RS19070 (3986796) | 3986796..3987899 | - | 1104 | WP_236927259.1 | hypothetical protein | - |
| QN227_RS19075 (3987936) | 3987936..3988184 | - | 249 | Protein_3728 | response regulator receiver domain | - |
| QN227_RS19080 (3988255) | 3988255..3989223 | - | 969 | WP_013815099.1 | IS5 family transposase IS903B | Transposase |
| QN227_RS19085 (3989245) | 3989245..3989496 | - | 252 | WP_033557622.1 | response regulator receiver domain | - |
| QN227_RS19090 (3989498) | 3989498..3992473 | - | 2976 | WP_033557621.1 | ATP-binding protein | - |
| QN227_RS19095 (3992466) | 3992466..3993386 | - | 921 | WP_236927261.1 | DNA cytosine methyltransferase | - |
| QN227_RS19100 (3993493) | 3993493..3994613 | + | 1121 | WP_113453230.1 | IS3 family transposase ISSen4 | Transposase |
| QN227_RS19105 (3995096) | 3995096..3996358 | - | 1263 | WP_033557618.1 | Prophage integrase IntA ; Integrase | Integrase |
| QN227_RS19115 (3996858) | 3996858..3997061 | + | 204 | Protein_3735 | zinc-binding alcohol dehydrogenase | - |
| QN227_RS19120 (3997168) | 3997168..3998670 | + | 1503 | WP_001315985.1 | DUF853 domain-containing protein | - |
| QN227_RS19125 (3998789) | 3998789..3999871 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| QN227_RS19130 (3999871) | 3999871..4000971 | - | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| QN227_RS19135 (4001034) | 4001034..4001084 | - | 51 | WP_211180521.1 | protein YtgA | - |
| QN227_RS19140 (4001238) | 4001238..4002749 | + | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| QN227_RS19145 (4002883) | 4002883..4003326 | + | 444 | WP_033557617.1 | DNA polymerase III subunit chi | - |
| QN227_RS19150 (4003326) | 4003326..4006181 | + | 2856 | WP_000416392.1 | valine--tRNA ligase | - |
| QN227_RS19155 (4006237) | 4006237..4007433 | - | 1197 | WP_000079641.1 | YjgN family protein | - |
| QN227_RS19160 (4007626) | 4007626..4008129 | + | 504 | WP_001059422.1 | GNAT family N-acetyltransferase | - |
| QN227_RS19165 (4008175) | 4008175..4008591 | - | 417 | WP_000002953.1 | ribonuclease E inhibitor RraB | - |
| QN227_RS19170 (4008753) | 4008753..4009757 | + | 1005 | WP_000012907.1 | Ornithine carbamoyltransferase subunit I | VF |
| QN227_RS19175 (4009829) | 4009829..4010152 | - | 324 | WP_001324721.1 | hypothetical protein | - |
| QN227_RS19180 (4010778) | 4010778..4011482 | - | 705 | Protein_3748 | DNA-binding protein | - |
| QN227_RS19185 (4011605) | 4011605..4012057 | - | 453 | WP_000583470.1 | toxin-antitoxin biofilm protein TabA | - |
| QN227_RS19190 (4012202) | 4012202..4012795 | - | 594 | WP_000256656.1 | TetR/AcrR family transcriptional regulator | - |
| QN227_RS19195 (4012866) | 4012866..4013579 | + | 714 | WP_000500727.1 | Cyclic-di-GMP-binding biofilm dispersal mediator protein | VF |
| QN227_RS19200 (4013710) | 4013710..4014105 | + | 396 | WP_000230281.1 | RidA family protein | - |
| QN227_RS19205 (4014386) | 4014386..4014520 | + | 135 | WP_001296693.1 | pyr operon leader peptide | - |
| QN227_RS19210 (4014524) | 4014524..4015459 | + | 936 | WP_000013046.1 | aspartate carbamoyltransferase | - |
| QN227_RS19215 (4015472) | 4015472..4015933 | + | 462 | WP_000148581.1 | aspartate carbamoyltransferase regulatory subunit | - |
| QN227_RS19220 (4016006) | 4016006..4016392 | + | 387 | WP_000047539.1 | 2-iminobutanoate/2-iminopropanoate deaminase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|