MGE detailed information
MGE type: Integron MGE length: 53346 bp
Accession: NZ_CP126347 Location: 1..53346 Organism: Escherichia coli strain DX6 Replicon: plasmid pDX6B
Accession: NZ_CP126347 Location: 1..53346 Organism: Escherichia coli strain DX6 Replicon: plasmid pDX6B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN223_RS24110 (QN223_24110) | 599..1399 | - | 801 | WP_000846390.1 | Beta-lactamase OXA-10 | ARG |
| QN223_RS24115 (QN223_24115) | 1664..2923 | - | 1260 | WP_012300772.1 | chloramphenicol efflux MFS transporter CmlA5 | ARG |
| QN223_RS24120 (QN223_24120) | 3244..3696 | - | 453 | WP_000237816.1 | hypothetical protein | ARG |
| QN223_RS24125 (QN223_24125) | 3869..4981 | + | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| QN223_RS24130 (QN223_24130) | 4927..5631 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QN223_RS24135 (QN223_24135) | 5698..6314 | - | 617 | Protein_6 | transposase | - |
| QN223_RS24140 (QN223_24140) | 6709..7365 | + | 657 | WP_206052542.1 | Pentapeptide repeat protein | ARG |
| QN223_RS24145 (QN223_24145) | 7684..8112 | - | 429 | Protein_8 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| QN223_RS24150 (QN223_24150) | 8145..9536 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| QN223_RS24155 (QN223_24155) | 9573..10145 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| QN223_RS24160 (QN223_24160) | 10282..10827 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| QN223_RS24165 (QN223_24165) | 10990..11232 | + | 243 | WP_000844627.1 | transposase | - |
| QN223_RS24170 (QN223_24170) | 11264..11914 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QN223_RS24175 (QN223_24175) | 12020..13218 | + | 1199 | Protein_14 | tetracycline efflux MFS transporter Tet(A) | - |
| QN223_RS24180 (QN223_24180) | 13250..14134 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| QN223_RS24185 (QN223_24185) | 14272..14634 | - | 363 | WP_223809875.1 | isochorismatase family protein | - |
| QN223_RS24190 (QN223_24190) | 14668..16419 | + | 1752 | Protein_17 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QN223_RS24195 (QN223_24195) | 16518..17156 | - | 639 | WP_024245155.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QN223_RS24200 (QN223_24200) | 17442..18062 | + | 621 | WP_000864791.1 | ParA family protein | - |
| QN223_RS24205 (QN223_24205) | 18114..18344 | + | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| QN223_RS24210 (QN223_24210) | 18360..18653 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| QN223_RS24215 (QN223_24215) | 18655..19623 | + | 969 | WP_077249520.1 | IS5 family transposase IS903B | Transposase |
| QN223_RS24220 (QN223_24220) | 19683..20036 | - | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| QN223_RS24225 (QN223_24225) | 20173..20619 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| QN223_RS24230 (QN223_24230) | 20659..21495 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| QN223_RS24235 (QN223_24235) | 22751..23002 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| QN223_RS24240 (QN223_24240) | 22992..23273 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QN223_RS24245 (QN223_24245) | 23419..23742 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| QN223_RS24250 (QN223_24250) | 23787..24032 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| QN223_RS24255 (QN223_24255) | 24022..24237 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| QN223_RS24260 (QN223_24260) | 24330..24659 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| QN223_RS24265 (QN223_24265) | 24946..25095 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| QN223_RS24270 (QN223_24270) | 25108..25380 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| QN223_RS24275 (QN223_24275) | 25707..26252 | + | 546 | WP_038976855.1 | DNA distortion polypeptide 1 | - |
| QN223_RS24280 (QN223_24280) | 26255..27412 | + | 1158 | WP_284564358.1 | DNA distortion polypeptide 2 | - |
| QN223_RS24285 (QN223_24285) | 27773..28264 | + | 492 | WP_000872475.1 | transcription termination/antitermination NusG family protein | - |
| QN223_RS24290 (QN223_24290) | 28489..29133 | + | 645 | WP_000953539.1 | hypothetical protein | VF |
| QN223_RS24295 (QN223_24295) | 29117..29407 | + | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| QN223_RS24300 (QN223_24300) | 29431..32190 | + | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| QN223_RS24305 (QN223_24305) | 32192..32929 | + | 738 | WP_000737859.1 | type IV secretion system protein | - |
| QN223_RS24310 (QN223_24310) | 32939..33199 | + | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| QN223_RS24315 (QN223_24315) | 33211..34266 | + | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| QN223_RS24320 (QN223_24320) | 34456..35178 | + | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| QN223_RS24325 (QN223_24325) | 35184..36113 | + | 930 | WP_000776689.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| QN223_RS24330 (QN223_24330) | 36110..37324 | + | 1215 | WP_001295061.1 | hypothetical protein | VF |
| QN223_RS24335 (QN223_24335) | 37342..38379 | + | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
| QN223_RS24340 (QN223_24340) | 38384..40219 | + | 1836 | WP_000053826.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QN223_RS24345 (QN223_24345) | 40216..40611 | + | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| QN223_RS24350 (QN223_24350) | 40614..40946 | + | 333 | WP_000699980.1 | hypothetical protein | - |
| QN223_RS24355 (QN223_24355) | 41189..42004 | + | 816 | WP_000018321.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QN223_RS24360 (QN223_24360) | 42158..43069 | - | 912 | Protein_51 | C45 family autoproteolytic acyltransferase/hydolase | - |
| QN223_RS24365 (QN223_24365) | 43213..43299 | + | 87 | Protein_52 | micrococcal nuclease | - |
| QN223_RS24370 (QN223_24370) | 43714..43959 | + | 246 | WP_001243650.1 | hypothetical protein | - |
| QN223_RS24375 (QN223_24375) | 43979..46303 | + | 2325 | WP_001235773.1 | type IA DNA topoisomerase | - |
| QN223_RS24380 (QN223_24380) | 46315..46764 | + | 450 | WP_001282381.1 | H-NS family nucleoid-associated regulatory protein | - |
| QN223_RS24385 (QN223_24385) | 46827..47231 | + | 405 | WP_000059893.1 | hypothetical protein | - |
| QN223_RS24390 (QN223_24390) | 47386..50169 | - | 2784 | Protein_57 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QN223_RS24395 (QN223_24395) | 50234..50527 | + | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| QN223_RS24400 (QN223_24400) | 50574..51449 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| QN223_RS24405 (QN223_24405) | 51638..52342 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QN223_RS24410 (QN223_24410) | 52589..53062 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|